BLASTX nr result

ID: Cephaelis21_contig00027904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027904
         (224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79806.1|AC020646_29 T32E20.13 [Arabidopsis thaliana]             71   8e-11
gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...    70   2e-10
pir||H85073 probable transposon protein [imported] - Arabidopsis...    70   2e-10
gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]              62   6e-08
gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]             61   1e-07

>gb|AAF79806.1|AC020646_29 T32E20.13 [Arabidopsis thaliana]
          Length = 1335

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/75 (42%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   YLEPEIAYFTRNTAREDIKKLHAS*VDRLRIDVCP--S*ICLTSDAWSSIVTDGYMSLTA 175
           YL P+ +Y+TRNT   D+ K   S  ++L++D+    S ICL  D W++I  +GY++LTA
Sbjct: 104 YLNPDYSYYTRNTEATDVVKTWDSEKNKLKMDLAKIQSRICLAFDCWTAIAGEGYITLTA 163

Query: 176 HYIDSNWLLQKKIIN 220
           HY+D +W L  KI++
Sbjct: 164 HYVDESWTLNSKILS 178


>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   YLEPEIAYFTRNTAREDIKKLHAS*VDRLRIDV--CPS*ICLTSDAWSSIVTDGYMSLTA 175
           Y+ P+   +TRNTA  D+ K        L+ ++   PS ICLTSD W+S+  DGY+ LTA
Sbjct: 129 YMNPDYKCYTRNTAAADVVKTWEKEKQILKSELERIPSRICLTSDCWTSLGGDGYIVLTA 188

Query: 176 HYIDSNWLLQKKIIN 220
           HY+D+ W+L  KI++
Sbjct: 189 HYVDTRWILNSKILS 203


>pir||H85073 probable transposon protein [imported] - Arabidopsis thaliana
           gi|5032279|gb|AAD38227.1|AF147264_10 may be a pseudogene
           [Arabidopsis thaliana] gi|7267351|emb|CAB81124.1|
           putative transposon protein [Arabidopsis thaliana]
          Length = 483

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/76 (43%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   YLEPEIAYFTRNTAREDIKKLHAS*VDRLRIDVC--PS*ICLTSDAWSSIVTDGYMSLTA 175
           YL  ++ +F+RNTA  DI K +    D+L+ ++   P  I L +D WS++  +GYM LTA
Sbjct: 47  YLNADVKFFSRNTAAADIYKFYEIETDKLKRELAQLPGRISLITDLWSALTHEGYMCLTA 106

Query: 176 HYIDSNWLLQKKIINL 223
           HYID NW L  KI+ +
Sbjct: 107 HYIDRNWKLNNKILKV 122


>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
          Length = 745

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/75 (36%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   YLEPEIAYFTRNTAREDIKKLHAS*VDRLR--IDVCPS*ICLTSDAWSSIVTDGYMSLTA 175
           Y+ P I +++RNTA  D+ K++     +L+  + + P  ICLT+D W ++  + Y+ LTA
Sbjct: 239 YVNPSIEFWSRNTAASDVYKIYEREKIKLKEKLAIIPGRICLTTDLWRALTVESYICLTA 298

Query: 176 HYIDSNWLLQKKIIN 220
           HY+D + +L+ KI++
Sbjct: 299 HYVDVDGVLKTKILS 313


>gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]
          Length = 633

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
 Frame = +2

Query: 2   YLEPEIAYFTRNTAREDIKKLHAS*VDRLR--IDVCPS*ICLTSDAWSSIVTDGYMSLTA 175
           Y  P I +++RNTA  D+ K++     +L+  + + P  ICLT+D W ++  + Y+ LTA
Sbjct: 149 YANPSIEFWSRNTAASDVYKIYEREKIKLKEKLAIIPGRICLTTDLWRALTVESYICLTA 208

Query: 176 HYIDSNWLLQKKIIN 220
           HY+D + +L+ KI++
Sbjct: 209 HYVDVDGVLKTKILS 223


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