BLASTX nr result

ID: Cephaelis21_contig00027733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027733
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|2...   275   4e-72
ref|XP_002512730.1| pentatricopeptide repeat-containing protein,...   261   5e-68
ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containi...   248   6e-64
emb|CBI25186.3| unnamed protein product [Vitis vinifera]              248   6e-64
ref|XP_003542138.1| PREDICTED: pentatricopeptide repeat-containi...   235   5e-60

>ref|XP_002332054.1| predicted protein [Populus trichocarpa] gi|222831940|gb|EEE70417.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  275 bits (703), Expect = 4e-72
 Identities = 128/199 (64%), Positives = 164/199 (82%)
 Frame = +2

Query: 2   SKVGNLFDSLRLYDEMKKRGFVPGIEVYNSLTYVLASQNCLKESLAVLNKMKEAGLTPES 181
           SKVGNLFDSLRLYD MKKRG+VPGIEVYNSL Y+L  +NC KE+L +L+KMKE GL  +S
Sbjct: 206 SKVGNLFDSLRLYDGMKKRGWVPGIEVYNSLVYILTRENCFKEALKILDKMKETGLQRDS 265

Query: 182 TTYNNIIRPLCAATKLEDARLVLAMMLEDNVSPTIDTYHAFLTSSSLEETLEVLQHMRKA 361
            TYN++IRPLC A KLEDAR ++A M+E+NVSPTI+TYHAFL     EET EVL  M+ A
Sbjct: 266 ATYNSMIRPLCEAKKLEDARSLMAAMIEENVSPTIETYHAFLQGIVFEETFEVLDRMKIA 325

Query: 362 GLGPSRSTFIQILAKFVELKQPESALKVWLEMKQHEIVPDLAHYTLLVEGLGKCGLLVKA 541
           GLGP+  TF+ +LAKF +L+QPE+ALK+W+EMKQ+E+  +L HYT++VEGL +CGLL KA
Sbjct: 326 GLGPTEDTFLLLLAKFFKLEQPENALKIWVEMKQYEVASNLTHYTVMVEGLARCGLLTKA 385

Query: 542 RMFYNEMRSKGFANEPKLE 598
           R +Y EMRS G++++PK++
Sbjct: 386 REYYAEMRSNGYSDDPKIQ 404


>ref|XP_002512730.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547741|gb|EEF49233.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 552

 Score =  261 bits (668), Expect = 5e-68
 Identities = 127/201 (63%), Positives = 160/201 (79%), Gaps = 2/201 (0%)
 Frame = +2

Query: 2   SKVGNLFDSLRLYDEMKKRGFVPGIEVYNSLTYVLASQNCLKESLAVLNKMKEAGLTPES 181
           SKVGNLFDSLRLYDEMKKRG++PG+EVYNSL YVL  +NC KE+L  L+KMKE GL P+S
Sbjct: 305 SKVGNLFDSLRLYDEMKKRGWLPGMEVYNSLIYVLTRENCFKEALRFLDKMKEVGLQPDS 364

Query: 182 TTYNNIIRPLCAATKLEDARLVLAMMLEDNVSPTIDTYHAFL--TSSSLEETLEVLQHMR 355
           TTYN++IRPLC   KL +AR VLA M+E+N+SPT++TYHA L   +S  E TLEVL  M 
Sbjct: 365 TTYNSMIRPLCEGKKLVEARSVLATMIEENISPTMETYHALLEVENSDFEATLEVLNRMT 424

Query: 356 KAGLGPSRSTFIQILAKFVELKQPESALKVWLEMKQHEIVPDLAHYTLLVEGLGKCGLLV 535
            AGL P+  TF+ +LAKF +L+Q E+ALK+W+EMKQ+E+ P+L HY +LVEGL +CGLL 
Sbjct: 425 VAGLAPTDDTFLLVLAKFFKLEQAENALKMWIEMKQYEVTPNLTHYKILVEGLVRCGLLA 484

Query: 536 KARMFYNEMRSKGFANEPKLE 598
           KAR  Y +MRS GF ++PKL+
Sbjct: 485 KARECYADMRSNGFTDDPKLQ 505


>ref|XP_002263537.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Vitis vinifera]
          Length = 537

 Score =  248 bits (633), Expect = 6e-64
 Identities = 119/199 (59%), Positives = 154/199 (77%)
 Frame = +2

Query: 2   SKVGNLFDSLRLYDEMKKRGFVPGIEVYNSLTYVLASQNCLKESLAVLNKMKEAGLTPES 181
           SK GNLFDSLRL+D+MKKRG++PG+EVYNSL YVL  +NCL E+L +L K+KE GL  +S
Sbjct: 293 SKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDS 352

Query: 182 TTYNNIIRPLCAATKLEDARLVLAMMLEDNVSPTIDTYHAFLTSSSLEETLEVLQHMRKA 361
            +YN +IRPLC A KLE+AR +LA M+ +N+ PT +TYHAFL  +S EET EVL+++R A
Sbjct: 353 ASYNCMIRPLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASYEETFEVLKNLRTA 412

Query: 362 GLGPSRSTFIQILAKFVELKQPESALKVWLEMKQHEIVPDLAHYTLLVEGLGKCGLLVKA 541
           G GP+  TF+ IL    +L QPE+ALK+W+EMKQ ++VP   HY +L+EGL K G LVKA
Sbjct: 413 GFGPNGDTFLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKA 472

Query: 542 RMFYNEMRSKGFANEPKLE 598
           R  Y EMRSKGF ++PKL+
Sbjct: 473 RELYAEMRSKGFLDDPKLK 491


>emb|CBI25186.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  248 bits (633), Expect = 6e-64
 Identities = 119/199 (59%), Positives = 154/199 (77%)
 Frame = +2

Query: 2   SKVGNLFDSLRLYDEMKKRGFVPGIEVYNSLTYVLASQNCLKESLAVLNKMKEAGLTPES 181
           SK GNLFDSLRL+D+MKKRG++PG+EVYNSL YVL  +NCL E+L +L K+KE GL  +S
Sbjct: 293 SKFGNLFDSLRLFDDMKKRGWIPGLEVYNSLIYVLTHENCLTEALKILGKIKEMGLQLDS 352

Query: 182 TTYNNIIRPLCAATKLEDARLVLAMMLEDNVSPTIDTYHAFLTSSSLEETLEVLQHMRKA 361
            +YN +IRPLC A KLE+AR +LA M+ +N+ PT +TYHAFL  +S EET EVL+++R A
Sbjct: 353 ASYNCMIRPLCKAKKLEEARTILAAMIGENLGPTTETYHAFLEGASYEETFEVLKNLRTA 412

Query: 362 GLGPSRSTFIQILAKFVELKQPESALKVWLEMKQHEIVPDLAHYTLLVEGLGKCGLLVKA 541
           G GP+  TF+ IL    +L QPE+ALK+W+EMKQ ++VP   HY +L+EGL K G LVKA
Sbjct: 413 GFGPNGDTFLLILDNLFKLDQPENALKIWVEMKQFDVVPGSEHYKVLIEGLTKFGWLVKA 472

Query: 542 RMFYNEMRSKGFANEPKLE 598
           R  Y EMRSKGF ++PKL+
Sbjct: 473 RELYAEMRSKGFLDDPKLK 491


>ref|XP_003542138.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
           mitochondrial-like [Glycine max]
          Length = 504

 Score =  235 bits (599), Expect = 5e-60
 Identities = 111/198 (56%), Positives = 147/198 (74%)
 Frame = +2

Query: 2   SKVGNLFDSLRLYDEMKKRGFVPGIEVYNSLTYVLASQNCLKESLAVLNKMKEAGLTPES 181
           S  GNLFDSLRLYD+MKKRG++PGIE+YNSL YVL  +NCLKE+L  ++K+KE GL P S
Sbjct: 270 SNEGNLFDSLRLYDQMKKRGWIPGIEIYNSLVYVLTHENCLKEALRTIDKLKEQGLQPGS 329

Query: 182 TTYNNIIRPLCAATKLEDARLVLAMMLEDNVSPTIDTYHAFLTSSSLEETLEVLQHMRKA 361
            T+N++I PLC A KL  AR++   M+E+NVSPT +TYHAF   +  + TLE L  M+ +
Sbjct: 330 ATFNSMILPLCEAGKLAGARIIFNTMVEENVSPTTETYHAFFEGTDYQGTLEFLTRMKDS 389

Query: 362 GLGPSRSTFIQILAKFVELKQPESALKVWLEMKQHEIVPDLAHYTLLVEGLGKCGLLVKA 541
           GLGP++ +F+ ILAKF++LKQP +ALK W EMK ++++P   HY ++VEGL  C   VKA
Sbjct: 390 GLGPNKDSFVIILAKFLKLKQPVNALKFWTEMKTYDVLPSCVHYRIMVEGLVTCRWFVKA 449

Query: 542 RMFYNEMRSKGFANEPKL 595
           R FY EM S G + +PKL
Sbjct: 450 RDFYEEMVSNGCSADPKL 467


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