BLASTX nr result

ID: Cephaelis21_contig00027649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027649
         (203 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   100   2e-19
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   100   2e-19
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja...   100   2e-19
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   100   2e-19
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      99   4e-19

>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = +1

Query: 1    GVAERMNQTLLESTRCMISNAGLTLDFWAEAIATACYIVNRSPCAPLDLKTPEEVWSGTP 180
            GVAERMN+T++   RC++SNAGL   FWAEA++TACY++NRSP   +D KTP EVWSG+P
Sbjct: 801  GVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP 860

Query: 181  ADYSTLR 201
            A+YS LR
Sbjct: 861  ANYSDLR 867


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  100 bits (248), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   GVAERMNQTLLESTRCMISNAGLTLDFWAEAIATACYIVNRSPCAPLDLKTPEEVWSGTP 180
           GVAERMN+T++   RC++SNAGL   FWAEA++TACY++NRSP   +D KTP EVWSG+P
Sbjct: 594 GVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP 653

Query: 181 ADYSTLR 201
           A+YS LR
Sbjct: 654 ANYSDLR 660


>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
           gi|20087076|gb|AAM10749.1|AC112514_2 Putative
           retroelement [Oryza sativa Japonica Group]
          Length = 1225

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   GVAERMNQTLLESTRCMISNAGLTLDFWAEAIATACYIVNRSPCAPLDLKTPEEVWSGTP 180
           GVAERMN+T++   RCM+SNAGL   FWAEA++TACY++NRSP   +D KTP +VWSG+P
Sbjct: 555 GVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIKVWSGSP 614

Query: 181 ADYSTLR 201
           A+YS LR
Sbjct: 615 ANYSDLR 621


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 43/67 (64%), Positives = 54/67 (80%)
 Frame = +1

Query: 1   GVAERMNQTLLESTRCMISNAGLTLDFWAEAIATACYIVNRSPCAPLDLKTPEEVWSGTP 180
           GVAERMN+T++   RCM+SNAGL   FWAEA++TACY++NRSP   +D KTP EVWSG+P
Sbjct: 560 GVAERMNRTIISKARCMLSNAGLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP 619

Query: 181 ADYSTLR 201
            +YS LR
Sbjct: 620 VNYSDLR 626


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 43/67 (64%), Positives = 54/67 (80%)
 Frame = +1

Query: 1   GVAERMNQTLLESTRCMISNAGLTLDFWAEAIATACYIVNRSPCAPLDLKTPEEVWSGTP 180
           GVAERMN+T++   RCM+SNA L   FWAEA++TACY++NRSP   +D KTP EVWSG+P
Sbjct: 503 GVAERMNRTIISKARCMLSNASLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSGSP 562

Query: 181 ADYSTLR 201
           A+YS LR
Sbjct: 563 ANYSDLR 569


Top