BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027643
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE05830.1| OSJNBa0028M15.22 [Oryza sativa Japonica Group]         75   7e-16
gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Ja...    74   3e-15
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ...    65   3e-15
gb|AAS07330.1| putative polyprotein [Oryza sativa Japonica Group...    85   6e-15
gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Ja...    74   1e-14

>emb|CAE05830.1| OSJNBa0028M15.22 [Oryza sativa Japonica Group]
          Length = 1324

 Score = 74.7 bits (182), Expect(2) = 7e-16
 Identities = 38/97 (39%), Positives = 65/97 (67%)
 Frame = -3

Query: 298  TLLTKIKDAQEQDGTLKKRREKALKGELLGYTIDPDGILRFQD*LFLPRNLEIKEEVLQE 119
            TLL +I++AQ+ D  ++   +   +G+  G+T D  G L   + + +P + E+K+ +LQE
Sbjct: 832  TLLDQIREAQKNDPDMRGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDKELKQLILQE 891

Query: 118  AHCSMYTVHPKNTKMYQNLKQKFC*DNMKREIAQYTS 8
            AH S Y++HP +TKMY +LK+K+   +MKREIA++ +
Sbjct: 892  AHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVA 928



 Score = 33.9 bits (76), Expect(2) = 7e-16
 Identities = 23/43 (53%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -1

Query: 540 HPGKPNVVADALSMKVKMARLMVREI--ELLQDASAWRPEITR 418
           HPGK NVVADALS K     L VR I  EL Q   A    I R
Sbjct: 778 HPGKANVVADALSRKSHCNTLNVRGIPPELNQQMEALNLSIVR 820


>gb|AAM74399.1|AC119149_14 Putative retroelement [Oryza sativa Japonica Group]
            gi|31431043|gb|AAP52881.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1821

 Score = 73.6 bits (179), Expect(2) = 3e-15
 Identities = 38/97 (39%), Positives = 64/97 (65%)
 Frame = -3

Query: 298  TLLTKIKDAQEQDGTLKKRREKALKGELLGYTIDPDGILRFQD*LFLPRNLEIKEEVLQE 119
            TLL +I++AQ+ D  +    +   +G+  G+T D  G L   + + +P + E+K+ +LQE
Sbjct: 1335 TLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQE 1394

Query: 118  AHCSMYTVHPKNTKMYQNLKQKFC*DNMKREIAQYTS 8
            AH S Y++HP +TKMY +LK+K+   +MKREIA++ +
Sbjct: 1395 AHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVA 1431



 Score = 33.1 bits (74), Expect(2) = 3e-15
 Identities = 24/47 (51%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 540  HPGKPNVVADALSMKVKMARLMVREI--ELLQDASAWRPEITRWRVL 406
            HPGK NVVADALS K     L VR I  EL Q   A    I    VL
Sbjct: 1281 HPGKANVVADALSRKSHCNTLNVRGIPPELSQQMEALNLSIVGHGVL 1327


>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 482

 Score = 64.7 bits (156), Expect(2) = 3e-15
 Identities = 33/93 (35%), Positives = 56/93 (60%)
 Frame = -3

Query: 292 LTKIKDAQEQDGTLKKRREKALKGELLGYTIDPDGILRFQD*LFLPRNLEIKEEVLQEAH 113
           L  IK+AQ+ D         + + E   + +D  G+LRF+  + +P + E+K+ +L+E+H
Sbjct: 224 LKSIKEAQKVDVKFVDLLVASNQTEDSDFKVDDHGVLRFRGRICIPDDAEMKKMILEESH 283

Query: 112 CSMYTVHPKNTKMYQNLKQKFC*DNMKREIAQY 14
            S  ++HP  TKMY NLK+ F    +KR++AQ+
Sbjct: 284 RSSLSIHPGATKMYHNLKKIFWWSGLKRDVAQF 316



 Score = 42.0 bits (97), Expect(2) = 3e-15
 Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
 Frame = -1

Query: 540 HPGKPNVVADALSMK-VKMARLMVREIELLQD------ASAWRPEITRWRVL 406
           HPGK NVVADALS K + M+ LMVRE ELL+          W P+  +  +L
Sbjct: 166 HPGKANVVADALSRKTLHMSALMVREFELLEQFRDLSLVCEWSPQSVKLGML 217


>gb|AAS07330.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|108710255|gb|ABF98050.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 1294

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 37/97 (38%), Positives = 68/97 (70%)
 Frame = -3

Query: 298  TLLTKIKDAQEQDGTLKKRREKALKGELLGYTIDPDGILRFQD*LFLPRNLEIKEEVLQE 119
            TL+ ++++AQ  D  +++ ++   +G+ +GY  D  G +   + + +P N E+K+ +L+E
Sbjct: 917  TLIDQVREAQTNDPDIQEIKKNMRRGKAIGYLEDEQGTVWLGERICVPENKELKDAILKE 976

Query: 118  AHCSMYTVHPKNTKMYQNLKQKFC*DNMKREIAQYTS 8
            AH ++Y++HP +TKMYQ+LK+KF   +MKREIA+Y +
Sbjct: 977  AHDTLYSIHPGSTKMYQDLKEKFWWASMKREIAEYVA 1013


>gb|AAK51585.1|AC022352_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1862

 Score = 73.6 bits (179), Expect(2) = 1e-14
 Identities = 38/97 (39%), Positives = 64/97 (65%)
 Frame = -3

Query: 298  TLLTKIKDAQEQDGTLKKRREKALKGELLGYTIDPDGILRFQD*LFLPRNLEIKEEVLQE 119
            TLL +I++AQ+ D  +    +   +G+  G+T D  G L   + + +P + E+K+ +LQE
Sbjct: 1376 TLLDQIREAQKNDPDMHGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQE 1435

Query: 118  AHCSMYTVHPKNTKMYQNLKQKFC*DNMKREIAQYTS 8
            AH S Y++HP +TKMY +LK+K+   +MKREIA++ +
Sbjct: 1436 AHESPYSIHPGSTKMYLDLKEKYWWVSMKREIAEFVA 1472



 Score = 30.8 bits (68), Expect(2) = 1e-14
 Identities = 23/47 (48%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -1

Query: 540  HPGKPNVVADALSMKVKMARLMVREI--ELLQDASAWRPEITRWRVL 406
            HP K NVVADALS K     L VR I  EL Q   A    I    VL
Sbjct: 1322 HPSKANVVADALSRKSHCNTLNVRGIPPELSQQMEALNLSIVGHGVL 1368