BLASTX nr result

ID: Cephaelis21_contig00027641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027641
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methy...   358   1e-96
ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransf...   339   6e-91
gb|AAC24056.1| Contains similarity to hypothetical 43.1 KD prote...   338   1e-90
ref|XP_002886632.1| radical SAM domain-containing protein [Arabi...   338   1e-90
ref|NP_564755.1| radical SAM domain-containing protein [Arabidop...   338   1e-90

>ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
           [Glycine max]
          Length = 445

 Score =  358 bits (918), Expect = 1e-96
 Identities = 172/222 (77%), Positives = 200/222 (90%)
 Frame = +3

Query: 273 GDDEKVEISKAGSKVILKGLTFPELEKWVQSQGYRSGQALMLWKRIYGNDSWANSYEELQ 452
           GD + V IS  G K++LKG+T+PELEKWVQS GYR GQA+MLWKR+YGN+ WA+  +EL+
Sbjct: 68  GDGDSVAISNEGLKMLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHIDELE 127

Query: 453 GLNKDFKRMLGKLADFKALSLKDIRMATDGTRKIMFTLEDCQVIETVVIPCERGRTTVCV 632
           GLNKDFK+ML + A+FKAL+ K+IR A+DGTRKI+FTLED  VIETVVIPC+RGRTTVCV
Sbjct: 128 GLNKDFKKMLNENAEFKALTQKEIRTASDGTRKILFTLEDGLVIETVVIPCDRGRTTVCV 187

Query: 633 SSQVGCAMNCQFCYTGRMGLRRNLSTSEIVEQAVLARRMLTSEVGAITNVVFMGMGEPLH 812
           SSQVGCAMNCQFCYTGRMGLRR+L+ +EIVEQAV ARR+LT EVG+ITNVVFMGMGEPLH
Sbjct: 188 SSQVGCAMNCQFCYTGRMGLRRHLTAAEIVEQAVFARRLLTDEVGSITNVVFMGMGEPLH 247

Query: 813 NIENVMKAAEIMVDEQGLHFSPRKVTVSTSGLVPQLKRFLRE 938
           NI+NV+KAA+IMVDEQGL FSPRKVT+STSGLVPQLKRFL E
Sbjct: 248 NIDNVIKAADIMVDEQGLQFSPRKVTISTSGLVPQLKRFLHE 289


>ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransferase RlmN-like
           [Cucumis sativus]
          Length = 482

 Score =  339 bits (869), Expect = 6e-91
 Identities = 174/271 (64%), Positives = 209/271 (77%)
 Frame = +3

Query: 126 SLLPCLKKLSVPSISLSLLGHGRLWSTVPHSYAVPTPSALHQDDFFAPLGDDEKVEISKA 305
           SL+P     + P  +  L  H   W  +  S A+P    +   DF               
Sbjct: 73  SLMPLRSVTASPLFTSLLSFHNNSWGCL--SKAMPEEKEILNADF--------------- 115

Query: 306 GSKVILKGLTFPELEKWVQSQGYRSGQALMLWKRIYGNDSWANSYEELQGLNKDFKRMLG 485
            SK++LKGL++ ELEKWVQ+QGYR GQALMLWKR+YG++ WA++ +EL+GLNKDFK+ML 
Sbjct: 116 NSKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLI 175

Query: 486 KLADFKALSLKDIRMATDGTRKIMFTLEDCQVIETVVIPCERGRTTVCVSSQVGCAMNCQ 665
           + A+F+ALSL++I  + DGTRKI+F LED  +IETVVIPC+RGRTTVCVSSQVGCAMNCQ
Sbjct: 176 ENAEFRALSLREILPSCDGTRKILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQ 235

Query: 666 FCYTGRMGLRRNLSTSEIVEQAVLARRMLTSEVGAITNVVFMGMGEPLHNIENVMKAAEI 845
           FCYTGRMGL+R+L+ +EIVEQAV ARR+LTSEVG ITNVVFMGMGEPLHNI+NV+KA  I
Sbjct: 236 FCYTGRMGLKRHLTAAEIVEQAVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNI 295

Query: 846 MVDEQGLHFSPRKVTVSTSGLVPQLKRFLRE 938
           MV EQGLHFSPRKVTVSTSGLVPQLKRFL E
Sbjct: 296 MVHEQGLHFSPRKVTVSTSGLVPQLKRFLNE 326


>gb|AAC24056.1| Contains similarity to hypothetical 43.1 KD protein in NDK-GCPE
           intergenic region gb|493519 from E. coli sequence
           gb|U02965 [Arabidopsis thaliana]
          Length = 454

 Score =  338 bits (866), Expect = 1e-90
 Identities = 162/209 (77%), Positives = 189/209 (90%)
 Frame = +3

Query: 312 KVILKGLTFPELEKWVQSQGYRSGQALMLWKRIYGNDSWANSYEELQGLNKDFKRMLGKL 491
           KV+LKG+T+  L++WVQS G+R GQALMLWKR+Y ++ WAN+ +EL+GLNKD KRM+ + 
Sbjct: 90  KVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEH 149

Query: 492 ADFKALSLKDIRMATDGTRKIMFTLEDCQVIETVVIPCERGRTTVCVSSQVGCAMNCQFC 671
           A+F ALS KDIR A+DGTRKI+FTL+D  VIETVVIPC+RGRTTVCVSSQVGCAMNCQFC
Sbjct: 150 AEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFC 209

Query: 672 YTGRMGLRRNLSTSEIVEQAVLARRMLTSEVGAITNVVFMGMGEPLHNIENVMKAAEIMV 851
           YTGRMGL+RNL+T+EIVEQAV ARR+L+ EVG+ITNVVFMGMGEP HNI+NV+KAA IMV
Sbjct: 210 YTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMV 269

Query: 852 DEQGLHFSPRKVTVSTSGLVPQLKRFLRE 938
           DE GLHFSPRKVTVSTSGLVPQLKRFLRE
Sbjct: 270 DENGLHFSPRKVTVSTSGLVPQLKRFLRE 298


>ref|XP_002886632.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297332473|gb|EFH62891.1| radical SAM
           domain-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 458

 Score =  338 bits (866), Expect = 1e-90
 Identities = 163/209 (77%), Positives = 189/209 (90%)
 Frame = +3

Query: 312 KVILKGLTFPELEKWVQSQGYRSGQALMLWKRIYGNDSWANSYEELQGLNKDFKRMLGKL 491
           KVILKG+T+  L++WVQS G+R GQALMLWKR+Y ++ WAN+ +EL+GLNKD KRM+ + 
Sbjct: 94  KVILKGMTYAALQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEH 153

Query: 492 ADFKALSLKDIRMATDGTRKIMFTLEDCQVIETVVIPCERGRTTVCVSSQVGCAMNCQFC 671
           A+F ALS KDIR A+DGTRKI+FTL+D  VIETVVIPC+RGRTTVCVSSQVGCAMNCQFC
Sbjct: 154 AEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFC 213

Query: 672 YTGRMGLRRNLSTSEIVEQAVLARRMLTSEVGAITNVVFMGMGEPLHNIENVMKAAEIMV 851
           YTGRMGL+RNL+T+EIVEQAV ARR+L+ EVG+ITNVVFMGMGEP HNI+NV+KAA IMV
Sbjct: 214 YTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMV 273

Query: 852 DEQGLHFSPRKVTVSTSGLVPQLKRFLRE 938
           DE GLHFSPRKVTVSTSGLVPQLKRFLRE
Sbjct: 274 DENGLHFSPRKVTVSTSGLVPQLKRFLRE 302


>ref|NP_564755.1| radical SAM domain-containing protein [Arabidopsis thaliana]
           gi|15451230|gb|AAK96886.1| Unknown protein [Arabidopsis
           thaliana] gi|20148295|gb|AAM10038.1| unknown protein
           [Arabidopsis thaliana] gi|332195547|gb|AEE33668.1|
           radical SAM domain-containing protein [Arabidopsis
           thaliana]
          Length = 458

 Score =  338 bits (866), Expect = 1e-90
 Identities = 162/209 (77%), Positives = 189/209 (90%)
 Frame = +3

Query: 312 KVILKGLTFPELEKWVQSQGYRSGQALMLWKRIYGNDSWANSYEELQGLNKDFKRMLGKL 491
           KV+LKG+T+  L++WVQS G+R GQALMLWKR+Y ++ WAN+ +EL+GLNKD KRM+ + 
Sbjct: 94  KVVLKGMTYASLQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMISEH 153

Query: 492 ADFKALSLKDIRMATDGTRKIMFTLEDCQVIETVVIPCERGRTTVCVSSQVGCAMNCQFC 671
           A+F ALS KDIR A+DGTRKI+FTL+D  VIETVVIPC+RGRTTVCVSSQVGCAMNCQFC
Sbjct: 154 AEFGALSFKDIRSASDGTRKILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFC 213

Query: 672 YTGRMGLRRNLSTSEIVEQAVLARRMLTSEVGAITNVVFMGMGEPLHNIENVMKAAEIMV 851
           YTGRMGL+RNL+T+EIVEQAV ARR+L+ EVG+ITNVVFMGMGEP HNI+NV+KAA IMV
Sbjct: 214 YTGRMGLKRNLTTAEIVEQAVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMV 273

Query: 852 DEQGLHFSPRKVTVSTSGLVPQLKRFLRE 938
           DE GLHFSPRKVTVSTSGLVPQLKRFLRE
Sbjct: 274 DENGLHFSPRKVTVSTSGLVPQLKRFLRE 302


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