BLASTX nr result

ID: Cephaelis21_contig00027454 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027454
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15151.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor...    93   2e-17
emb|CAN83019.1| hypothetical protein VITISV_036392 [Vitis vinifera]    89   4e-16
ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor...    88   6e-16
ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor...    88   6e-16

>emb|CBI15151.3| unnamed protein product [Vitis vinifera]
          Length = 954

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = +3

Query: 9   RKLERKEDDRTVKKSNSSNAVDKDQVMKEREVSRREYLKKRVRSKLEELRSDI--EQYLV 182
           +KL RKE++  +++SN   A+++D +   R+VSR+EYLKKR + KLEELR DI  EQYL 
Sbjct: 207 QKLSRKEEEEAIRRSN---AMEEDDISALRKVSRQEYLKKREQKKLEELRDDIEDEQYLF 263

Query: 183 DGVKPTEAETCELRYKQEIYEHVQKLSRSAVADFREY 293
           DGVK TEAE  ELRYK+EIY+ V+K S     D  EY
Sbjct: 264 DGVKLTEAEQRELRYKREIYDLVKKRSEE-TDDINEY 299


>ref|XP_002284415.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16-like [Vitis vinifera]
          Length = 1056

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/97 (54%), Positives = 69/97 (71%), Gaps = 2/97 (2%)
 Frame = +3

Query: 9   RKLERKEDDRTVKKSNSSNAVDKDQVMKEREVSRREYLKKRVRSKLEELRSDI--EQYLV 182
           +KL RKE++  +++SN   A+++D +   R+VSR+EYLKKR + KLEELR DI  EQYL 
Sbjct: 207 QKLSRKEEEEAIRRSN---AMEEDDISALRKVSRQEYLKKREQKKLEELRDDIEDEQYLF 263

Query: 183 DGVKPTEAETCELRYKQEIYEHVQKLSRSAVADFREY 293
           DGVK TEAE  ELRYK+EIY+ V+K S     D  EY
Sbjct: 264 DGVKLTEAEQRELRYKREIYDLVKKRSEE-TDDINEY 299


>emb|CAN83019.1| hypothetical protein VITISV_036392 [Vitis vinifera]
          Length = 332

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 51/96 (53%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
 Frame = +3

Query: 12  KLERKEDDRTVKKSNSSNAVDKDQVMKEREVSRREYLKKRVRSKLEELRSDI--EQYLVD 185
           KL RKE++  +++SN   A+++D +   R+VSR+EYLKK  + KLEELR DI  EQYL+D
Sbjct: 50  KLSRKEEEEAIRRSN---AMEEDDISALRKVSRQEYLKKMEQKKLEELRDDIEDEQYLLD 106

Query: 186 GVKPTEAETCELRYKQEIYEHVQKLSRSAVADFREY 293
           GVK  EAE  ELRYK+EIY+ V+K S     D  EY
Sbjct: 107 GVKLIEAEQRELRYKREIYDLVKKRSEE-TDDINEY 141


>ref|XP_003527106.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 2 [Glycine max]
          Length = 1035

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
 Frame = +3

Query: 9   RKLERKEDDRTVKKSNSSNAVDKDQVMKEREVSRREYLKKRVRSKLEELRSDI--EQYLV 182
           +KL RKE++  +++S    A ++D +   R+VSR+EYLKKR   KLEELR DI  EQYL 
Sbjct: 197 QKLTRKEEEEAIRRSK---AAEQDDIQSLRKVSRQEYLKKREEKKLEELRDDIEDEQYLF 253

Query: 183 DGVKPTEAETCELRYKQEIYEHVQKLSRSA 272
           +GVK +EAE  ELRYK+EIYE V+K S  A
Sbjct: 254 EGVKLSEAEYRELRYKKEIYELVKKRSEEA 283


>ref|XP_003527105.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16 isoform 1 [Glycine max]
          Length = 1044

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 49/90 (54%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
 Frame = +3

Query: 9   RKLERKEDDRTVKKSNSSNAVDKDQVMKEREVSRREYLKKRVRSKLEELRSDI--EQYLV 182
           +KL RKE++  +++S    A ++D +   R+VSR+EYLKKR   KLEELR DI  EQYL 
Sbjct: 197 QKLTRKEEEEAIRRSK---AAEQDDIQSLRKVSRQEYLKKREEKKLEELRDDIEDEQYLF 253

Query: 183 DGVKPTEAETCELRYKQEIYEHVQKLSRSA 272
           +GVK +EAE  ELRYK+EIYE V+K S  A
Sbjct: 254 EGVKLSEAEYRELRYKKEIYELVKKRSEEA 283


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