BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027360
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containi...    95   2e-17
ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. l...    87   8e-15
gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thal...    84   7e-14
ref|NP_177865.2| pentatricopeptide repeat-containing protein [Ar...    84   7e-14
ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containi...    83   1e-13

>ref|XP_004149831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
           gi|449518241|ref|XP_004166151.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g77405-like [Cucumis sativus]
          Length = 445

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 49/95 (51%), Positives = 69/95 (72%)
 Frame = -2

Query: 296 VNQILVLIIKDQPFQISNSVSAAAQSIPEANPIWTTETVTHVLRFIPRVLFQSSRSIGNQ 117
           V+QILV ++K++PF     V +AA S    + +W++++V+ VLR +PR  FQS+RSIG Q
Sbjct: 15  VDQILVAMLKNRPFD--THVHSAA-STSTTHQLWSSDSVSDVLRSVPRFFFQSARSIGTQ 71

Query: 116 KGFRHRAPLKQRRLKIESLKAQTGELILGPAAYRD 12
           KGFRHR PLKQR+LK E+ K +   L+LGP A+RD
Sbjct: 72  KGFRHRTPLKQRKLKEEAYKFRNNVLVLGPGAHRD 106


>ref|XP_002887681.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333522|gb|EFH63940.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 86.7 bits (213), Expect = 8e-15
 Identities = 52/114 (45%), Positives = 69/114 (60%)
 Frame = -2

Query: 344 MFPSKPLHRYFSEALFVNQILVLIIKDQPFQISNSVSAAAQSIPEANPIWTTETVTHVLR 165
           M PS+PL         ++Q++  +I+++PF       A   S   ANP WT + V+ VLR
Sbjct: 1   MKPSQPLCNRI-----IDQLIAAMIQNRPFD------AVLASSTVANP-WTQQLVSDVLR 48

Query: 164 FIPRVLFQSSRSIGNQKGFRHRAPLKQRRLKIESLKAQTGELILGPAAYRDVEK 3
            IPR  F S RSIG QKGFRHR+PLKQR L  ES + ++  L+LGP AY D +K
Sbjct: 49  SIPRFFFISPRSIGRQKGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYIDPKK 102


>gb|AAG29200.1|AC078898_10 hypothetical protein [Arabidopsis thaliana]
          Length = 410

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 49/114 (42%), Positives = 67/114 (58%)
 Frame = -2

Query: 344 MFPSKPLHRYFSEALFVNQILVLIIKDQPFQISNSVSAAAQSIPEANPIWTTETVTHVLR 165
           M PS+PL         V+Q++  +I+++PF    + S  A+        WT + V+ VL 
Sbjct: 1   MKPSQPLCNRI-----VDQLITAMIQNRPFDAVLASSTVAKP-------WTQQLVSDVLH 48

Query: 164 FIPRVLFQSSRSIGNQKGFRHRAPLKQRRLKIESLKAQTGELILGPAAYRDVEK 3
            IPR  F S RSIG QKGFRHR+PLKQR L  ES + ++  L+LGP AY D +K
Sbjct: 49  SIPRFFFISPRSIGRQKGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYMDPKK 102


>ref|NP_177865.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|122244095|sp|Q1PFC5.1|PP130_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g77405 gi|91806103|gb|ABE65780.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332197853|gb|AEE35974.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 458

 Score = 83.6 bits (205), Expect = 7e-14
 Identities = 49/114 (42%), Positives = 67/114 (58%)
 Frame = -2

Query: 344 MFPSKPLHRYFSEALFVNQILVLIIKDQPFQISNSVSAAAQSIPEANPIWTTETVTHVLR 165
           M PS+PL         V+Q++  +I+++PF    + S  A+        WT + V+ VL 
Sbjct: 1   MKPSQPLCNRI-----VDQLITAMIQNRPFDAVLASSTVAKP-------WTQQLVSDVLH 48

Query: 164 FIPRVLFQSSRSIGNQKGFRHRAPLKQRRLKIESLKAQTGELILGPAAYRDVEK 3
            IPR  F S RSIG QKGFRHR+PLKQR L  ES + ++  L+LGP AY D +K
Sbjct: 49  SIPRFFFISPRSIGRQKGFRHRSPLKQRNLSDESQRRRSEVLVLGPGAYMDPKK 102


>ref|XP_003553291.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g77405-like [Glycine max]
          Length = 732

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 49/106 (46%), Positives = 61/106 (57%)
 Frame = -2

Query: 320 RYFSEALFVNQILVLIIKDQPFQISNSVSAAAQSIPEANPIWTTETVTHVLRFIPRVLFQ 141
           R+F + L  +Q LVL+IKD PF       A       + P WT + VT VLR I R   Q
Sbjct: 294 RHFHKHL-ASQTLVLVIKDLPFD------AHPPPPSPSPPPWTNDAVTEVLRLISRYTLQ 346

Query: 140 SSRSIGNQKGFRHRAPLKQRRLKIESLKAQTGELILGPAAYRDVEK 3
           S RSIG Q  FRHR PL+QR L +E  K ++  L+LGPAA+ D  K
Sbjct: 347 SPRSIGRQHTFRHRTPLRQRNLNLEHHKLRSNTLLLGPAAHLDPRK 392