BLASTX nr result
ID: Cephaelis21_contig00027351
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00027351
(720 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ... 84 1e-19
gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thali... 79 3e-18
gb|ABK28199.1| unknown [Arabidopsis thaliana] 79 4e-18
gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thali... 79 4e-18
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 82 5e-18
>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 676
Score = 84.0 bits (206), Expect(2) = 1e-19
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Frame = +3
Query: 21 WSLVFGITCWNIWKWRNEVIFQERTRSLQSKHAI--IIVEVRSYELARLISLSQKPQTTQ 194
W +F +T W WKWR +F E +R + + EV + LA + +
Sbjct: 445 WPTLFALTVWWGWKWRCGYVFGEDSRCRDRVKFLKSAVAEVEAAHLAANGDAREDVLVER 504
Query: 195 LDKWCPPKPGWKALNTDGSC-----STD*RCVFRDEIGSWLGGFQTKLKWAGILHAELMA 359
+ W P GW +NTDG+ V RDE GSWL GF + AEL
Sbjct: 505 MIAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGSWLVGFALNIGVCSAPLAELWG 564
Query: 360 ILQGLKLAWEKSWRKLEVQTDCAEAADLLQQPLSHTHKFPDLV 488
+ GL +AWE+ WR++ ++ D A LQ + +H LV
Sbjct: 565 VYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPLAFLV 607
Score = 38.5 bits (88), Expect(2) = 1e-19
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = +1
Query: 502 LDRHWDVKVILISREANRIADTLAKSALSQLLEFRWCQSPPLNLHSLVAMDVNGIITSRH 681
+ + W V++ + REANR+AD LA A + F S P ++ S++ DV G RH
Sbjct: 614 ISKDWIVRITHVYREANRLADGLANYAFTLPFGFLLLDSCPEHVSSILLEDVMGTSFPRH 673
>gb|ABE65462.1| hypothetical protein At2g27870 [Arabidopsis thaliana]
Length = 314
Score = 79.0 bits (193), Expect(2) = 3e-18
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Frame = +3
Query: 12 EADWSLVFGITCWNIWKWRNEVIF------QERTRSLQSKHAIIIVEVRSYELARLISLS 173
E+ WS +F ++ W WKWR IF ++R R L+ + ++ + R +S
Sbjct: 79 ESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRFLKD---LARETSMAHVIVRTLSGG 135
Query: 174 QKPQTTQLDKWCPPKPGWKALNTDGSCSTD*RC-----VFRDEIGSWLGGFQTKLKWAGI 338
+ +L W P+ GW LNTDG+ + V RDE G+W GGF +
Sbjct: 136 HGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSA 195
Query: 339 LHAELMAILQGLKLAWEKSWRKLEVQTDCAEAADLLQQPLSHTHKFPDLV 488
AEL + GL +AWE+ +LE++ D L+ ++ H LV
Sbjct: 196 PLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIXINEVHPLSFLV 245
Score = 38.9 bits (89), Expect(2) = 3e-18
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 502 LDRHWDVKVILISREANRIADTLAKSALSQLLEFRWCQSPPLNLHSLVAMDVNGIITSR 678
+ R W V++ + REANR+AD LA A S L F P +L ++ D +G SR
Sbjct: 252 ISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSR 310
>gb|ABK28199.1| unknown [Arabidopsis thaliana]
Length = 315
Score = 78.6 bits (192), Expect(2) = 4e-18
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Frame = +3
Query: 12 EADWSLVFGITCWNIWKWRNEVIF------QERTRSLQSKHAIIIVEVRSYELARLISLS 173
E+ WS +F ++ W WKWR IF ++R R L+ + ++ + R +S
Sbjct: 79 ESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRFLKD---LARETSMAHVIVRTLSGG 135
Query: 174 QKPQTTQLDKWCPPKPGWKALNTDGSCSTD*RC-----VFRDEIGSWLGGFQTKLKWAGI 338
+ +L W P+ GW LNTDG+ + V RDE G+W GGF +
Sbjct: 136 HGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSA 195
Query: 339 LHAELMAILQGLKLAWEKSWRKLEVQTDCAEAADLLQQPLSHTHKFPDLV 488
AEL + GL +AWE+ +LE++ D L+ ++ H LV
Sbjct: 196 PLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLV 245
Score = 38.9 bits (89), Expect(2) = 4e-18
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 502 LDRHWDVKVILISREANRIADTLAKSALSQLLEFRWCQSPPLNLHSLVAMDVNGIITSR 678
+ R W V++ + REANR+AD LA A S L F P +L ++ D +G SR
Sbjct: 252 ISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSR 310
>gb|AAD21515.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|20197456|gb|AAM15081.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 314
Score = 78.6 bits (192), Expect(2) = 4e-18
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 11/170 (6%)
Frame = +3
Query: 12 EADWSLVFGITCWNIWKWRNEVIF------QERTRSLQSKHAIIIVEVRSYELARLISLS 173
E+ WS +F ++ W WKWR IF ++R R L+ + ++ + R +S
Sbjct: 79 ESTWSTLFALSIWWAWKWRCGNIFGVQDKCRDRVRFLKD---LARETSMAHVIVRTLSGG 135
Query: 174 QKPQTTQLDKWCPPKPGWKALNTDGSCSTD*RC-----VFRDEIGSWLGGFQTKLKWAGI 338
+ +L W P+ GW LNTDG+ + V RDE G+W GGF +
Sbjct: 136 HGERVERLIAWSKPEEGWWKLNTDGASRGNPGLASAGGVLRDEEGAWRGGFALNIGVCSA 195
Query: 339 LHAELMAILQGLKLAWEKSWRKLEVQTDCAEAADLLQQPLSHTHKFPDLV 488
AEL + GL +AWE+ +LE++ D L+ ++ H LV
Sbjct: 196 PLAELWGVYYGLYIAWERRVTRLEIEVDSEIVVGFLKIGINEVHPLSFLV 245
Score = 38.9 bits (89), Expect(2) = 4e-18
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +1
Query: 502 LDRHWDVKVILISREANRIADTLAKSALSQLLEFRWCQSPPLNLHSLVAMDVNGIITSR 678
+ R W V++ + REANR+AD LA A S L F P +L ++ D +G SR
Sbjct: 252 ISRDWRVRISHVYREANRLADGLANYAFSLPLGFHSLSLVPDSLRFILLDDTSGATVSR 310
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 81.6 bits (200), Expect(2) = 5e-18
Identities = 52/167 (31%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Frame = +3
Query: 21 WSLVFGITCWNIWKWRNEVIFQERTRSLQSKHAIIIVEVRSYELARLISLSQKPQTTQLD 200
W F W+IW RN+ +F+ + + ++ + + A ++ +Q + +
Sbjct: 1137 WVTKFTTAFWHIWCSRNKTVFECAVNHPKFTYNRVVADFFTNIRAFQVNNTQGNGSKVVL 1196
Query: 201 KWCPPKPGWKALNTDGSCSTD*RC-----VFRDEIGSWLGGFQTKLKWAGILHAELMAIL 365
+W PP G+ LNTDG+ D VFRD +G+W GF ++ AELMAI
Sbjct: 1197 RWKPPHQGFLKLNTDGAWKADWENAGIGGVFRDAVGNWELGFAKRVDAGSPEAAELMAIR 1256
Query: 366 QGLKLAWEKSWRKLEVQTDCAEAADLLQQPL-SHTHKFPDLV*DIRI 503
+GL++AW+ ++ KLEV+ D LL +PL + H +V DI I
Sbjct: 1257 EGLQVAWDCNYHKLEVECDAKGVVQLLAKPLEAENHPLGVIVMDICI 1303
Score = 35.4 bits (80), Expect(2) = 5e-18
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 502 LDRHWDVKVILISREANRIADTLAKSALSQLLEFRWCQSPPLNLHSLVAMDVNGIITS 675
L RHW V+ + I RE N++A LA A++Q+ E +PP + + D + +S
Sbjct: 1305 LTRHWSVEFLHIKREGNKVAHCLAAEAVNQVEERVIFINPPEHAKEVYFKDKEFVASS 1362