BLASTX nr result
ID: Cephaelis21_contig00027327
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00027327
(1746 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 119 5e-64
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 100 3e-55
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 112 9e-54
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 112 9e-54
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 98 3e-53
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 119 bits (299), Expect(4) = 5e-64
Identities = 88/266 (33%), Positives = 119/266 (44%), Gaps = 7/266 (2%)
Frame = -3
Query: 1738 IWIL*RVGFHAMTLSSSDQYMHLLVT-HDDYIPSFRCTFVYAKSTRQDRQVLWEDLGALQ 1562
+W L A+ + SDQ + L ++ H + VYA + R+ LW +L LQ
Sbjct: 69 LWALWGREVSAIVMFISDQCIALEISCHQSTV---YVAAVYASTFYLKRRQLWAELTNLQ 125
Query: 1561 GSIGDHPWLVGGDFNTIASLEEYVGRVPQNPSSIEDFCSCISSCDLTKLPISGGLFTW-N 1385
G PWL GDFN + E R P P S DF + ++ L LP G +TW N
Sbjct: 126 GCF-QGPWLFIGDFNAVLGAHEKRRRRPPPPLSCIDFMNWSNANLLHHLPTLGAFYTWSN 184
Query: 1384 GVHARGRVWKRLDRLLVNDHWM-----SLCTNSLETHLNRSSSDHFPLLLSFGSQIPSRP 1220
G V RLDR + N+ W+ S C+ + L R SDH PLL+S R
Sbjct: 185 GRLGSDNVALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQSDHHPLLMSMDFCTSQRS 244
Query: 1219 RAFRFKTMWTKQTGYLELVSENWQ*PIEGYGMCRFSWKLK*LKQCLRDWNWREFSNVHDN 1040
F+F WT+ +V+ENW G+GM R KLK +KQ R WN F +V
Sbjct: 245 GNFKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWNRTVFGDVDRK 304
Query: 1039 VRHAEVLITTLESRFDITHLGDDLIA 962
VR A + ++ D D L A
Sbjct: 305 VRMAVEEVNRIQQIIDSVGFSDQLYA 330
Score = 84.7 bits (208), Expect(4) = 5e-64
Identities = 45/122 (36%), Positives = 71/122 (58%)
Frame = -3
Query: 463 LSRAVGSTLITLIPKKPNYMSFTNFRPISLCTFLNKVLTKISCARLKSLLHVLIPPKQSV 284
L++ + S LI LIPK P ++RPI+L F K+++KI RL + +I +Q
Sbjct: 494 LAQNINSNLIVLIPKVPGARVMGDYRPIALANFQFKIISKILADRLADITMRIISVEQRG 553
Query: 283 FLLG*DASNNVLLA*ELVQSIDRKARGHNMLIKLDMQKAFDRVSWEFLSGVLLKFRFHRR 104
F+ D S V+LA E + ++++ G N+ +K+D+ KAFD + W FL VL +F F +
Sbjct: 554 FIRDRDISKCVILASEAINLLEKRQYGGNVALKVDIAKAFDTLDWNFLLAVLQRFGFDEK 613
Query: 103 FV 98
FV
Sbjct: 614 FV 615
Score = 84.3 bits (207), Expect(4) = 5e-64
Identities = 52/144 (36%), Positives = 77/144 (53%)
Frame = -2
Query: 908 WKQKAGLKWFKEGDRNSKLFHASLLQRQEKLYIGRI*NTEGVWLDNLGDIE*HAASFFQY 729
W++K + F GDRN+ FH R K I + + + V D IE H ++FQ
Sbjct: 350 WREKLRDQRFIHGDRNTAYFHRISKVRATKNTISFLQDGDAVITDP-ARIEVHVLNYFQA 408
Query: 728 LLSASTDSTYSQHIAAFLEDVPSLVSYDNNCQLLRQVIMFEVKDAVFDLDPDSAPGNDGF 549
+ S + + ++ +PSLVS +N LLR + EVK+AVF L+ D APG +GF
Sbjct: 409 IFSVDNSCIQNDLV---VDTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGDGAPGPNGF 465
Query: 548 PGSFYRHCWPTISPDLLLAVQDFF 477
G FY+ W + D++ +VQDFF
Sbjct: 466 GGHFYQTYWDIVGADVIQSVQDFF 489
Score = 26.2 bits (56), Expect(4) = 5e-64
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 95 FIMTNFKGAWFSVLVNGAP*GFFKASWGLK 6
+I+ + A SVLVNG GFF S G++
Sbjct: 617 WILVILQSARLSVLVNGKAVGFFTCSHGVR 646
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 100 bits (249), Expect(4) = 3e-55
Identities = 66/250 (26%), Positives = 109/250 (43%), Gaps = 3/250 (1%)
Frame = -3
Query: 1741 KIWIL*RVGFHAMTLSSSDQYMHLLVTHDDYIPSFRCTFVYAKSTRQDRQVLWEDLGALQ 1562
+IW++ LS SDQ + V F TFVYA + R R+ LW +L L
Sbjct: 69 RIWVVWDPAVEVTVLSKSDQTISCTVKLPHISTEFVVTFVYAVNCRYGRRRLWSELELLA 128
Query: 1561 GS--IGDHPWLVGGDFNTIASLEEYVGRVPQNPSSIEDFCSCISSCDLTKLPISGGLFTW 1388
+ D PW++ GDFN + + +E+F C+ + +++ LP G +TW
Sbjct: 129 ANQTTSDKPWIILGDFNQSLDPVDASTGGSRITRGMEEFRECLLTSNISDLPFRGNHYTW 188
Query: 1387 NGVHARGRVWKRLDRLLVNDHWMSLCTNSLETHLNRSSSDHFPLLLSFGSQIPSRPRAFR 1208
+ K++DR+LVND W+ S + SDH P ++ +Q R + F+
Sbjct: 189 WNNQENNPIAKKIDRILVNDSWLIASPLSYGSFCAMEFSDHCPSCVNISNQSGGRNKPFK 248
Query: 1207 FKTMWTKQTGYLELVSENW-Q*PIEGYGMCRFSWKLK*LKQCLRDWNWREFSNVHDNVRH 1031
++E + W + +G M S K K LK +R +N +S + V
Sbjct: 249 LSNFLMHHPEFIEKIRVTWDRLAYQGSAMFTLSKKSKFLKGTIRTFNREHYSGLEKRVVQ 308
Query: 1030 AEVLITTLES 1001
A + T ++
Sbjct: 309 AAQNLKTCQN 318
Score = 90.9 bits (224), Expect(4) = 3e-55
Identities = 49/117 (41%), Positives = 70/117 (59%)
Frame = -3
Query: 445 STLITLIPKKPNYMSFTNFRPISLCTFLNKVLTKISCARLKSLLHVLIPPKQSVFLLG*D 266
ST +T++PKKPN T FRPIS C + KV++K+ RL+++L + I P QS F+ G
Sbjct: 504 STAVTMVPKKPNADRITEFRPISCCNAIYKVISKLLARRLENILPLWISPSQSAFVKGRL 563
Query: 265 ASNNVLLA*ELVQSIDRKARGHNMLIKLDMQKAFDRVSWEFLSGVLLKFRFHRRFVD 95
+ NVLLA ELVQ + ++K+D++KAFD V W F+ L RFV+
Sbjct: 564 LTENVLLATELVQGFGQANISSRGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVN 620
Score = 70.9 bits (172), Expect(4) = 3e-55
Identities = 41/146 (28%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Frame = -2
Query: 911 FWKQKAGLKWFKEGDRNSKLFHASLLQRQEKLYIGRI*NTEGVWLDNLGDIE*HAASFFQ 732
F QK+ + W K GD N+ FH + R+ I + + G ++N +++ H FF+
Sbjct: 349 FLCQKSRVLWLKCGDSNTTFFHRMMTARRAINEIHYLLDQTGRRIENTDELQTHCVDFFK 408
Query: 731 YLLSASTDSTYSQHIAAFLEDVPSLVSYDNNCQLLR-QVIMFEVKDAVFDLDPDSAPGND 555
L +S+ ++ I+ + + +N QLL +V ++K F L + +PG D
Sbjct: 409 ELFGSSSHLISAEGISQ-INSLTRFKCDENTRQLLEAEVSEADIKSEFFALPSNKSPGPD 467
Query: 554 GFPGSFYRHCWPTISPDLLLAVQDFF 477
G+ F++ W + P L+ AVQ+FF
Sbjct: 468 GYTSEFFKKTWSIVGPSLIAAVQEFF 493
Score = 23.1 bits (48), Expect(4) = 3e-55
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 65 FSVLVNGAP*GFFKASWGLK 6
FS+ V+G+ G+FK S GL+
Sbjct: 631 FSINVSGSLCGYFKGSKGLR 650
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 112 bits (281), Expect(3) = 9e-54
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Frame = -3
Query: 1741 KIWIL*RVGFHAMTLSSSDQYMHLLVTHDDYIPSFRCTFVYAKSTRQDRQVLWEDLGALQ 1562
+IWI+ + +DQ M + + SF FVY +++ DR+ LWED+ L
Sbjct: 111 RIWIVWDPSISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDILVLS 170
Query: 1561 GS--IGDHPWLVGGDFNTIASLEEY--VGRVPQNPSSIEDFCSCISSCDLTKLPISGGLF 1394
+ + PWL+ GDFN IA+ E+ + + N +ED C+ L+ LP G F
Sbjct: 171 RTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFF 230
Query: 1393 TWNGVHARGRVWKRLDRLLVNDHWMSLCTNSLETHLNRSSSDHFPLLLSFGSQIPSRPRA 1214
TW+ + ++LDR L N W ++ ++L SDH P ++ +Q P ++
Sbjct: 231 TWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKS 290
Query: 1213 FRFKTMWTKQTGYLELVSENW-Q*PIEGYGMCRFSWKLK*LKQCLRDWNWREFSNVHDNV 1037
F++ + + YL +S W + + G M LK K C R N FSN+
Sbjct: 291 FKYFSFLSSHPSYLAALSTAWEENTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRT 350
Query: 1036 RHAEVLITTLE 1004
+ +T LE
Sbjct: 351 AQS---LTRLE 358
Score = 77.8 bits (190), Expect(3) = 9e-54
Identities = 43/112 (38%), Positives = 61/112 (54%)
Frame = -3
Query: 463 LSRAVGSTLITLIPKKPNYMSFTNFRPISLCTFLNKVLTKISCARLKSLLHVLIPPKQSV 284
L R +T ITLIPK T FRP++ CT + KV+T+I RLK + + Q
Sbjct: 542 LPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVG 601
Query: 283 FLLG*DASNNVLLA*ELVQSIDRKARGHNMLIKLDMQKAFDRVSWEFLSGVL 128
F+ G NVLLA ELV + + +++D+ KA+D V+WEFL +L
Sbjct: 602 FIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAYDNVNWEFLINIL 653
Score = 69.3 bits (168), Expect(3) = 9e-54
Identities = 37/150 (24%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Frame = -2
Query: 911 FWKQKAGLKWFKEGDRNSKLFHASLLQRQEKLYIGRI*NTEGVWLDNLGDIE*HAASFFQ 732
F++QK+ ++W EGD N++ FH +++ Q I + +G ++N+ I+ +++
Sbjct: 393 FFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYS 452
Query: 731 YLLSASTDSTYSQHIAAF-LEDVPSLVSYDNNCQLLRQVIMF----EVKDAVFDLDPDSA 567
+LL S+++ F +E + L+ + + L Q+ E+ +F + + A
Sbjct: 453 HLLGIP-----SENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKA 507
Query: 566 PGNDGFPGSFYRHCWPTISPDLLLAVQDFF 477
PG DGFP F+ W + ++ A+++FF
Sbjct: 508 PGPDGFPVEFFIEAWAIVKSSVVAAIREFF 537
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 112 bits (281), Expect(3) = 9e-54
Identities = 71/251 (28%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Frame = -3
Query: 1741 KIWIL*RVGFHAMTLSSSDQYMHLLVTHDDYIPSFRCTFVYAKSTRQDRQVLWEDLGALQ 1562
+IWI+ + +DQ M + + SF FVY +++ DR+ LWED+ L
Sbjct: 68 RIWIVWDPSISVLVFKRTDQIMFCSIKIPSLLQSFAVAFVYGRNSELDRRSLWEDILVLS 127
Query: 1561 GS--IGDHPWLVGGDFNTIASLEEY--VGRVPQNPSSIEDFCSCISSCDLTKLPISGGLF 1394
+ + PWL+ GDFN IA+ E+ + + N +ED C+ L+ LP G F
Sbjct: 128 RTSPLSVTPWLLLGDFNQIAAASEHYSINQSLLNLRGMEDLQCCLRDSQLSDLPSRGVFF 187
Query: 1393 TWNGVHARGRVWKRLDRLLVNDHWMSLCTNSLETHLNRSSSDHFPLLLSFGSQIPSRPRA 1214
TW+ + ++LDR L N W ++ ++L SDH P ++ +Q P ++
Sbjct: 188 TWSNHQQDNPILRKLDRALANGEWFAVFPSALAVFDPPGDSDHAPCIILIDNQPPPSKKS 247
Query: 1213 FRFKTMWTKQTGYLELVSENWQ-*PIEGYGMCRFSWKLK*LKQCLRDWNWREFSNVHDNV 1037
F++ + + YL +S W+ + G M LK K C R N FSN+
Sbjct: 248 FKYFSFLSSHPSYLAALSTAWEANTLVGSHMFSLRQHLKVAKLCCRTLNRLRFSNIQQRT 307
Query: 1036 RHAEVLITTLE 1004
+ +T LE
Sbjct: 308 AQS---LTRLE 315
Score = 77.8 bits (190), Expect(3) = 9e-54
Identities = 43/112 (38%), Positives = 61/112 (54%)
Frame = -3
Query: 463 LSRAVGSTLITLIPKKPNYMSFTNFRPISLCTFLNKVLTKISCARLKSLLHVLIPPKQSV 284
L R +T ITLIPK T FRP++ CT + KV+T+I RLK + + Q
Sbjct: 499 LPRGFNATAITLIPKVTGADRLTQFRPVACCTTIYKVITRIISRRLKLFIDQAVQANQVG 558
Query: 283 FLLG*DASNNVLLA*ELVQSIDRKARGHNMLIKLDMQKAFDRVSWEFLSGVL 128
F+ G NVLLA ELV + + +++D+ KA+D V+WEFL +L
Sbjct: 559 FIKGRLLCENVLLASELVDNFEADGETTRGCLQVDISKAYDNVNWEFLINIL 610
Score = 69.3 bits (168), Expect(3) = 9e-54
Identities = 37/150 (24%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Frame = -2
Query: 911 FWKQKAGLKWFKEGDRNSKLFHASLLQRQEKLYIGRI*NTEGVWLDNLGDIE*HAASFFQ 732
F++QK+ ++W EGD N++ FH +++ Q I + +G ++N+ I+ +++
Sbjct: 350 FFRQKSRIRWLHEGDANTRFFHRAVIAHQATNLIKFLRGDDGFRVENVDQIKGMLIAYYS 409
Query: 731 YLLSASTDSTYSQHIAAF-LEDVPSLVSYDNNCQLLRQVIMF----EVKDAVFDLDPDSA 567
+LL S+++ F +E + L+ + + L Q+ E+ +F + + A
Sbjct: 410 HLLGIP-----SENVTPFSVEKIKGLLPFRCDSFLASQLTTIPSEEEITQVLFSMPRNKA 464
Query: 566 PGNDGFPGSFYRHCWPTISPDLLLAVQDFF 477
PG DGFP F+ W + ++ A+++FF
Sbjct: 465 PGPDGFPVEFFIEAWAIVKSSVVAAIREFF 494
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 97.8 bits (242), Expect(4) = 3e-53
Identities = 75/281 (26%), Positives = 118/281 (41%), Gaps = 11/281 (3%)
Frame = -3
Query: 1741 KIWIL*RVGFHAMTLSSSDQYMHLLVTHDDYIPSFRCTFVYAKSTRQDRQVLWEDLGALQ 1562
+IW+L R + S Q + V +D F C+FVYA + ++R+VLW +L
Sbjct: 68 RIWVLWRKNVRLSPIYKSCQLLTCSVKLEDRQDEFFCSFVYASNYVEERKVLWSELKDHY 127
Query: 1561 GS--IGDHPWLVGGDFNTIASLEEYVGRV--PQNPSSIEDFCSCISSCDLTKLPISGGLF 1394
S I PW + GDFN + E+ P + DF I+ C LT + G LF
Sbjct: 128 DSPIIRHKPWTLLGDFNETLDIAEHSQSFVHPMVTPGMRDFQQVINYCSLTDMAAQGPLF 187
Query: 1393 TWNGVHARGRVWKRLDRLLVNDHWMSLCTNSLETHLNRSSSDHFPLLLSFGSQIPSRP-- 1220
TW G + K+LDR+L+ND W + S SDH +S S+ ++
Sbjct: 188 TWCNKREHGLIMKKLDRVLINDCWNQTFSQSYSVFEAGGCSDHLRCRISLNSEAGNKVQG 247
Query: 1219 -RAFRFKTMWTKQTGYLELVSENWQ*P----IEGYGMCRFSWKLK*LKQCLRDWNWREFS 1055
+ F+F T + +VS W+ + + RFS LK LK +R
Sbjct: 248 LKPFKFVNALTDMEDFKPMVSTYWKDTEPLILSTSTLFRFSKNLKGLKPKIRSMARDRLG 307
Query: 1054 NVHDNVRHAEVLITTLESRFDITHLGDDLIALNETQATFFR 932
N+ A ++ ++ + +A+ E A + R
Sbjct: 308 NLSKKANEAYKILC---AKQHVNLTNPSSMAMEEENAAYSR 345
Score = 83.2 bits (204), Expect(4) = 3e-53
Identities = 48/122 (39%), Positives = 64/122 (52%)
Frame = -3
Query: 463 LSRAVGSTLITLIPKKPNYMSFTNFRPISLCTFLNKVLTKISCARLKSLLHVLIPPKQSV 284
L + + ST++ LIPKK ++RPIS C L KV++KI RLK +L I QS
Sbjct: 505 LPKGINSTILALIPKKTEAREMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSA 564
Query: 283 FLLG*DASNNVLLA*ELVQSIDRKARGHNMLIKLDMQKAFDRVSWEFLSGVLLKFRFHRR 104
F+ N+LLA ELV+ + IK+D+ KAFD V W FL V F R
Sbjct: 565 FVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPRE 624
Query: 103 FV 98
F+
Sbjct: 625 FI 626
Score = 73.2 bits (178), Expect(4) = 3e-53
Identities = 42/147 (28%), Positives = 70/147 (47%)
Frame = -2
Query: 911 FWKQKAGLKWFKEGDRNSKLFHASLLQRQEKLYIGRI*NTEGVWLDNLGDIE*HAASFFQ 732
+ KQK+ L W + GD+N+K FH + R+ I I + +G+ +I+ A FF+
Sbjct: 356 YLKQKSKLHWCQVGDQNTKAFHRAAAAREAHNTIREILSNDGIVKTKGDEIKAEAERFFR 415
Query: 731 YLLSASTDSTYSQHIAAFLEDVPSLVSYDNNCQLLRQVIMFEVKDAVFDLDPDSAPGNDG 552
L + I + +P S + L+R V E++ +F + D +PG DG
Sbjct: 416 EFLQLIPNDFEGVTITELQQLLPVRCSDADQQSLIRPVTAEEIRKVLFRMPSDKSPGPDG 475
Query: 551 FPGSFYRHCWPTISPDLLLAVQDFFCR 471
+ F++ W I + LAVQ FF +
Sbjct: 476 YTSEFFKATWEIIGDEFTLAVQSFFTK 502
Score = 24.3 bits (51), Expect(4) = 3e-53
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -2
Query: 71 AWFSVLVNGAP*GFFKASWGLK 6
A FSV VNG G+F++S GL+
Sbjct: 636 ASFSVQVNGELAGYFQSSRGLR 657