BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027227
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    55   7e-06
gb|ABB46931.2| retrotransposon protein, putative, unclassified [...    55   7e-06

>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/123 (33%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
 Frame = -3

Query: 358  ICWGIWKVRNKKIFEDAHPMGS*DISHALNLLITPSSIQHFPLLLA--------SQHKIQ 203
            + W IW  RN+ +     P           +L++   I+ + L LA        S  K +
Sbjct: 1655 VLWRIWHTRNEIVHGKPAP----------GMLVSKRFIESYVLSLAEIKQHPQASPEKGK 1704

Query: 202  HIGG-----LHSTSRGYSSRVITWIKPTPSSFKLNVDGSSVCN*GHSGRGVVLRNSQEEV 38
            H+       LHS  R        W+KP P S KLNVDGS   + G  G G VLRN   EV
Sbjct: 1705 HVVDVVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEV 1764

Query: 37   LFA 29
            +FA
Sbjct: 1765 IFA 1767


>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1853

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 41/123 (33%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
 Frame = -3

Query: 358  ICWGIWKVRNKKIFEDAHPMGS*DISHALNLLITPSSIQHFPLLLA--------SQHKIQ 203
            + W IW  RN+ +     P           +L++   I+ + L LA        S  K +
Sbjct: 1620 VLWRIWHTRNEIVHGKPAP----------GMLVSKRFIESYVLSLAEIKQHPQASPEKGK 1669

Query: 202  HIGG-----LHSTSRGYSSRVITWIKPTPSSFKLNVDGSSVCN*GHSGRGVVLRNSQEEV 38
            H+       LHS  R        W+KP P S KLNVDGS   + G  G G VLRN   EV
Sbjct: 1670 HVVDVVQKKLHSIKRSREPVPDKWLKPLPGSMKLNVDGSFQESDGKGGIGAVLRNCTGEV 1729

Query: 37   LFA 29
            +FA
Sbjct: 1730 IFA 1732