BLASTX nr result

ID: Cephaelis21_contig00027226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027226
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin...   141   2e-50
ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g...   141   6e-50
ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter...   138   8e-50
ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana] gi|12...   134   3e-47
ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arab...   134   4e-47

>ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max]
           gi|255628381|gb|ACU14535.1| unknown [Glycine max]
          Length = 193

 Score =  141 bits (355), Expect(2) = 2e-50
 Identities = 66/74 (89%), Positives = 69/74 (93%)
 Frame = +1

Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471
           REPNVYDFGTPYK M EDLRRKDPDLYKRNGI PMLKRN  VKLAPQRWQENAADG+FD+
Sbjct: 47  REPNVYDFGTPYKHMIEDLRRKDPDLYKRNGIFPMLKRNSTVKLAPQRWQENAADGSFDV 106

Query: 472 VLTFEEKVFDMVIE 513
           V+TFEEKVFDMVIE
Sbjct: 107 VVTFEEKVFDMVIE 120



 Score = 83.2 bits (204), Expect(2) = 2e-50
 Identities = 38/47 (80%), Positives = 43/47 (91%)
 Frame = +3

Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293
           MK+RYAMVCSSNQNRSME+H LLKR+GFD+SSYGT  HVKLPG SL+
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLR 47


>ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis]
           gi|223545267|gb|EEF46774.1| Protein SSU72, putative
           [Ricinus communis]
          Length = 193

 Score =  141 bits (355), Expect(2) = 6e-50
 Identities = 65/74 (87%), Positives = 71/74 (95%)
 Frame = +1

Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471
           REPNVYDFGTPYK MF+DLRRKDPDLYKRNGILPMLKRN +VKLAPQRWQ+NAADG+FD+
Sbjct: 47  REPNVYDFGTPYKQMFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDV 106

Query: 472 VLTFEEKVFDMVIE 513
           V +FEEKVFDMVIE
Sbjct: 107 VFSFEEKVFDMVIE 120



 Score = 81.6 bits (200), Expect(2) = 6e-50
 Identities = 38/47 (80%), Positives = 42/47 (89%)
 Frame = +3

Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293
           MK RYAMVCSSNQNRSME+HSLLK +GFD+SSYGT  HVKLPG SL+
Sbjct: 1   MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLR 47


>ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain
           phosphatase SSU72 [Vitis vinifera]
           gi|296083946|emb|CBI24334.3| unnamed protein product
           [Vitis vinifera]
          Length = 193

 Score =  138 bits (347), Expect(2) = 8e-50
 Identities = 63/74 (85%), Positives = 69/74 (93%)
 Frame = +1

Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471
           REPNVY+FGTPYK MF+DLRRKDPDLYKRNGILPMLKRN +VK APQRWQ+NAADG FD+
Sbjct: 47  REPNVYEFGTPYKHMFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDV 106

Query: 472 VLTFEEKVFDMVIE 513
           V TFEEKVFDMV+E
Sbjct: 107 VFTFEEKVFDMVVE 120



 Score = 84.3 bits (207), Expect(2) = 8e-50
 Identities = 38/47 (80%), Positives = 44/47 (93%)
 Frame = +3

Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293
           MK+RYAMVCSSNQNRSME+HSLLK++GFD+SSYGT  HVKLPG SL+
Sbjct: 1   MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLR 47


>ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana]
           gi|12324205|gb|AAG52071.1|AC012679_9 unknown protein;
           85102-83684 [Arabidopsis thaliana]
           gi|26453040|dbj|BAC43596.1| unknown protein [Arabidopsis
           thaliana] gi|28973307|gb|AAO63978.1| unknown protein
           [Arabidopsis thaliana] gi|332197391|gb|AEE35512.1|
           Ssu72-like protein [Arabidopsis thaliana]
          Length = 193

 Score =  134 bits (336), Expect(2) = 3e-47
 Identities = 60/74 (81%), Positives = 69/74 (93%)
 Frame = +1

Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471
           REPNVYDFGTPYK MF++LRRKDP+LYKRNGIL M+KRNL+VKLAPQRWQ+NA DG FD+
Sbjct: 47  REPNVYDFGTPYKQMFDELRRKDPELYKRNGILQMIKRNLSVKLAPQRWQDNAGDGVFDV 106

Query: 472 VLTFEEKVFDMVIE 513
           V+TFEEKVFD V+E
Sbjct: 107 VMTFEEKVFDSVLE 120



 Score = 80.1 bits (196), Expect(2) = 3e-47
 Identities = 35/47 (74%), Positives = 43/47 (91%)
 Frame = +3

Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293
           M++RYAMVCSSNQNRSME+H+LLKR+G D++SYGT  HVKLPG SL+
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLR 47


>ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp.
           lyrata] gi|297334789|gb|EFH65207.1| hypothetical protein
           ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  134 bits (338), Expect(2) = 4e-47
 Identities = 61/74 (82%), Positives = 69/74 (93%)
 Frame = +1

Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471
           REPNVYDFGTPYK MF++LRRKDP+LYKRNGIL MLKRNL+VKLAPQRWQ+NA DG FD+
Sbjct: 47  REPNVYDFGTPYKQMFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGVFDV 106

Query: 472 VLTFEEKVFDMVIE 513
           V+TFEEKVFD V+E
Sbjct: 107 VMTFEEKVFDSVLE 120



 Score = 79.0 bits (193), Expect(2) = 4e-47
 Identities = 34/47 (72%), Positives = 43/47 (91%)
 Frame = +3

Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293
           M++RYAMVCSSNQNRSME+H+LLKR+G D++SYGT  HVKLPG S++
Sbjct: 1   MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVR 47


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