BLASTX nr result
ID: Cephaelis21_contig00027226
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00027226 (533 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycin... 141 2e-50 ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] g... 141 6e-50 ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-ter... 138 8e-50 ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana] gi|12... 134 3e-47 ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arab... 134 4e-47 >ref|NP_001238070.1| uncharacterized protein LOC100306388 [Glycine max] gi|255628381|gb|ACU14535.1| unknown [Glycine max] Length = 193 Score = 141 bits (355), Expect(2) = 2e-50 Identities = 66/74 (89%), Positives = 69/74 (93%) Frame = +1 Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471 REPNVYDFGTPYK M EDLRRKDPDLYKRNGI PMLKRN VKLAPQRWQENAADG+FD+ Sbjct: 47 REPNVYDFGTPYKHMIEDLRRKDPDLYKRNGIFPMLKRNSTVKLAPQRWQENAADGSFDV 106 Query: 472 VLTFEEKVFDMVIE 513 V+TFEEKVFDMVIE Sbjct: 107 VVTFEEKVFDMVIE 120 Score = 83.2 bits (204), Expect(2) = 2e-50 Identities = 38/47 (80%), Positives = 43/47 (91%) Frame = +3 Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293 MK+RYAMVCSSNQNRSME+H LLKR+GFD+SSYGT HVKLPG SL+ Sbjct: 1 MKFRYAMVCSSNQNRSMEAHFLLKRQGFDVSSYGTGAHVKLPGPSLR 47 >ref|XP_002515629.1| Protein SSU72, putative [Ricinus communis] gi|223545267|gb|EEF46774.1| Protein SSU72, putative [Ricinus communis] Length = 193 Score = 141 bits (355), Expect(2) = 6e-50 Identities = 65/74 (87%), Positives = 71/74 (95%) Frame = +1 Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471 REPNVYDFGTPYK MF+DLRRKDPDLYKRNGILPMLKRN +VKLAPQRWQ+NAADG+FD+ Sbjct: 47 REPNVYDFGTPYKQMFDDLRRKDPDLYKRNGILPMLKRNSSVKLAPQRWQDNAADGSFDV 106 Query: 472 VLTFEEKVFDMVIE 513 V +FEEKVFDMVIE Sbjct: 107 VFSFEEKVFDMVIE 120 Score = 81.6 bits (200), Expect(2) = 6e-50 Identities = 38/47 (80%), Positives = 42/47 (89%) Frame = +3 Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293 MK RYAMVCSSNQNRSME+HSLLK +GFD+SSYGT HVKLPG SL+ Sbjct: 1 MKLRYAMVCSSNQNRSMEAHSLLKMQGFDVSSYGTGAHVKLPGPSLR 47 >ref|XP_002271255.1| PREDICTED: RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [Vitis vinifera] gi|296083946|emb|CBI24334.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 138 bits (347), Expect(2) = 8e-50 Identities = 63/74 (85%), Positives = 69/74 (93%) Frame = +1 Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471 REPNVY+FGTPYK MF+DLRRKDPDLYKRNGILPMLKRN +VK APQRWQ+NAADG FD+ Sbjct: 47 REPNVYEFGTPYKHMFDDLRRKDPDLYKRNGILPMLKRNSSVKTAPQRWQDNAADGPFDV 106 Query: 472 VLTFEEKVFDMVIE 513 V TFEEKVFDMV+E Sbjct: 107 VFTFEEKVFDMVVE 120 Score = 84.3 bits (207), Expect(2) = 8e-50 Identities = 38/47 (80%), Positives = 44/47 (93%) Frame = +3 Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293 MK+RYAMVCSSNQNRSME+HSLLK++GFD+SSYGT HVKLPG SL+ Sbjct: 1 MKFRYAMVCSSNQNRSMEAHSLLKKQGFDVSSYGTGAHVKLPGPSLR 47 >ref|NP_177523.1| Ssu72-like protein [Arabidopsis thaliana] gi|12324205|gb|AAG52071.1|AC012679_9 unknown protein; 85102-83684 [Arabidopsis thaliana] gi|26453040|dbj|BAC43596.1| unknown protein [Arabidopsis thaliana] gi|28973307|gb|AAO63978.1| unknown protein [Arabidopsis thaliana] gi|332197391|gb|AEE35512.1| Ssu72-like protein [Arabidopsis thaliana] Length = 193 Score = 134 bits (336), Expect(2) = 3e-47 Identities = 60/74 (81%), Positives = 69/74 (93%) Frame = +1 Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471 REPNVYDFGTPYK MF++LRRKDP+LYKRNGIL M+KRNL+VKLAPQRWQ+NA DG FD+ Sbjct: 47 REPNVYDFGTPYKQMFDELRRKDPELYKRNGILQMIKRNLSVKLAPQRWQDNAGDGVFDV 106 Query: 472 VLTFEEKVFDMVIE 513 V+TFEEKVFD V+E Sbjct: 107 VMTFEEKVFDSVLE 120 Score = 80.1 bits (196), Expect(2) = 3e-47 Identities = 35/47 (74%), Positives = 43/47 (91%) Frame = +3 Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293 M++RYAMVCSSNQNRSME+H+LLKR+G D++SYGT HVKLPG SL+ Sbjct: 1 MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSLR 47 >ref|XP_002888948.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata] gi|297334789|gb|EFH65207.1| hypothetical protein ARALYDRAFT_895246 [Arabidopsis lyrata subsp. lyrata] Length = 193 Score = 134 bits (338), Expect(2) = 4e-47 Identities = 61/74 (82%), Positives = 69/74 (93%) Frame = +1 Query: 292 REPNVYDFGTPYK*MFEDLRRKDPDLYKRNGILPMLKRNLAVKLAPQRWQENAADGTFDI 471 REPNVYDFGTPYK MF++LRRKDP+LYKRNGIL MLKRNL+VKLAPQRWQ+NA DG FD+ Sbjct: 47 REPNVYDFGTPYKQMFDELRRKDPELYKRNGILQMLKRNLSVKLAPQRWQDNAGDGVFDV 106 Query: 472 VLTFEEKVFDMVIE 513 V+TFEEKVFD V+E Sbjct: 107 VMTFEEKVFDSVLE 120 Score = 79.0 bits (193), Expect(2) = 4e-47 Identities = 34/47 (72%), Positives = 43/47 (91%) Frame = +3 Query: 153 MKYRYAMVCSSNQNRSMESHSLLKREGFDISSYGTDQHVKLPGLSLK 293 M++RYAMVCSSNQNRSME+H+LLKR+G D++SYGT HVKLPG S++ Sbjct: 1 MRFRYAMVCSSNQNRSMEAHALLKRQGLDVASYGTGSHVKLPGPSVR 47