BLASTX nr result

ID: Cephaelis21_contig00027181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027181
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533488.1| pentatricopeptide repeat-containing protein,...   148   5e-34
ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
gb|ABD96900.1| hypothetical protein [Cleome spinosa]                  145   3e-33
ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_003621610.1| Pentatricopeptide repeat-containing protein ...   138   5e-31

>ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526650|gb|EEF28892.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 939

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/94 (69%), Positives = 85/94 (90%)
 Frame = -1

Query: 288 LDHYASMVDILGRSGRVTEALKLVQEMPFEADDVIWRTLLSVCKMKRNVEVAEIAATSLL 109
           ++HY+ M+DI+GRSGR++EALKL+QEMPFEAD VIWRTLLS+CK+  N+E+AE A  ++L
Sbjct: 717 IEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAIL 776

Query: 108 QLDPQDSSTCVLLSNIYADAGMWDEVSELRKLMR 7
           QL+P+DSS C+LLSNIYADAGMW +VSE+RK+MR
Sbjct: 777 QLEPEDSSACILLSNIYADAGMWGKVSEMRKMMR 810


>ref|XP_002331286.1| predicted protein [Populus trichocarpa] gi|222873711|gb|EEF10842.1|
            predicted protein [Populus trichocarpa]
          Length = 897

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/93 (77%), Positives = 80/93 (86%)
 Frame = -1

Query: 285  DHYASMVDILGRSGRVTEALKLVQEMPFEADDVIWRTLLSVCKMKRNVEVAEIAATSLLQ 106
            +HY+ MVDILGRSGR+ EAL LVQ+MPFEAD VIWR LLSVCK+  NVEVAE A  +LLQ
Sbjct: 723  EHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQ 782

Query: 105  LDPQDSSTCVLLSNIYADAGMWDEVSELRKLMR 7
            LDPQDSS CVLLSNIYADAGMW  VSE+RK+MR
Sbjct: 783  LDPQDSSACVLLSNIYADAGMWGNVSEMRKMMR 815


>gb|ABD96900.1| hypothetical protein [Cleome spinosa]
          Length = 924

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/95 (74%), Positives = 84/95 (88%), Gaps = 1/95 (1%)
 Frame = -1

Query: 288  LDHYASMVDILGRSGRVTEALKLVQEMPFEADDVIWRTLLSVCKMKR-NVEVAEIAATSL 112
            L+HY++MVDILG+SG V +AL+L+QEMPFEADDVIWRTLLS CK+ R NVE AE+AA +L
Sbjct: 748  LEHYSNMVDILGKSGEVEKALELIQEMPFEADDVIWRTLLSACKINRNNVEAAEVAANAL 807

Query: 111  LQLDPQDSSTCVLLSNIYADAGMWDEVSELRKLMR 7
            L+LDPQDSST +LLSNIYADAGMWD+ SELR  MR
Sbjct: 808  LRLDPQDSSTYILLSNIYADAGMWDKASELRTAMR 842


>ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
           gi|449528041|ref|XP_004171015.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/94 (71%), Positives = 84/94 (89%)
 Frame = -1

Query: 288 LDHYASMVDILGRSGRVTEALKLVQEMPFEADDVIWRTLLSVCKMKRNVEVAEIAATSLL 109
           L+HY+ MVDILGRSG+V EAL+L+Q+MPFEAD +IWRTLLS+CK++ NVEVAE AA+SLL
Sbjct: 698 LEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLL 757

Query: 108 QLDPQDSSTCVLLSNIYADAGMWDEVSELRKLMR 7
           +LDP+DSS   LLSNIYADAGMW +VS++R+ MR
Sbjct: 758 KLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMR 791


>ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355496625|gb|AES77828.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/94 (68%), Positives = 81/94 (86%)
 Frame = -1

Query: 288 LDHYASMVDILGRSGRVTEALKLVQEMPFEADDVIWRTLLSVCKMKRNVEVAEIAATSLL 109
           ++HY+ MVD+LGRSG+V EAL+L++ MPFEADDVIWRTLL +C+++ NVEVAE AA SLL
Sbjct: 711 MEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLL 770

Query: 108 QLDPQDSSTCVLLSNIYADAGMWDEVSELRKLMR 7
           QLDPQDSS  VLLSN+YA AGMW EV+++R  M+
Sbjct: 771 QLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMK 804


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