BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027127
         (1683 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   477   e-132
ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|2...   473   e-131
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      460   e-127
dbj|BAA88922.1| sigma factor [Nicotiana tabacum]                      459   e-127
emb|CBI26421.3| unnamed protein product [Vitis vinifera]              456   e-126

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  477 bits (1228), Expect = e-132
 Identities = 269/441 (60%), Positives = 312/441 (70%), Gaps = 7/441 (1%)
 Frame = +3

Query: 381  MATAAVIGLSAGKRLLNSSYFYSDLTEKLYNSNNSDLHRHXXXXXXXXXXXXXXXXXXQI 560
            MATAAVIGLSAGKRLL+S+++YSDLTEKL ++N   L  +                    
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSS---NY 57

Query: 561  NTSFPF-HRQIQSTTALKEHVETATSAPSVTQPWFYRLPNQIDEECSDPDEYPVEALLQL 737
              SFP  +R  QS  ALKEHV+TA SAPS     F    N ++EE SD D Y VEALL L
Sbjct: 58   GPSFPSSNRNTQSIKALKEHVDTA-SAPSTAATQFKTF-NDMEEESSDLD-YSVEALLLL 114

Query: 738  QRSILEKQWSLSSESTRSNNC------KQMQVTSSGSSAXXXXXXXXXXXXXXXXXXXXX 899
            Q+S+LEKQW+LS E T S++       K++ VT SG SA                     
Sbjct: 115  QKSMLEKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQA 174

Query: 900  XXXXXXXPIIGPELLQNRFKGYLKGVVSEELLTHNQVVLLSKTMKDGLRLEEQKTRLRKR 1079
                     + PELLQNR KGY+KGVVSEELL+H +VV LS+ +K GL LE+ K+RL++R
Sbjct: 175  NVFKQLKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKER 234

Query: 1080 LGCEPSEEQLASALNISRAELQLKFVECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 1259
            LGC+PS+EQ+A++L ISRAELQ K + CSLAREKLAMSN+RLVMSIAQRYDNMGAEMAD 
Sbjct: 235  LGCDPSDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADL 294

Query: 1260 XXXXXXXXXXXXEKYDASKGFKISTYVYWWIRQGVSRALVENSRTMRLPTHLHERLSLIR 1439
                        EK+D+SKGF+ISTYVYWWIRQGVSRALVENSRT+RLP HLHERL LIR
Sbjct: 295  VQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIR 354

Query: 1440 NAKIRLEEKGVTPSTDKIAEYLNMSQKKVRNATEAICKVISLDREAFPSLNALPGETMHS 1619
            NAKIRLEEKGVTPS D+IAE LN+SQKKVRNATEA+ KV SLDREAFPSLN LPGET HS
Sbjct: 355  NAKIRLEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHS 414

Query: 1620 YIADYRQENNPWHGVDEWALK 1682
            YIAD   ENNPWHGVD+WALK
Sbjct: 415  YIADNCLENNPWHGVDDWALK 435


>ref|XP_002325882.1| predicted protein [Populus trichocarpa] gi|222862757|gb|EEF00264.1|
            predicted protein [Populus trichocarpa]
          Length = 509

 Score =  473 bits (1218), Expect = e-131
 Identities = 263/442 (59%), Positives = 310/442 (70%), Gaps = 7/442 (1%)
 Frame = +3

Query: 378  IMATAAVIGLSAGKRLLNSSYFYSDLTEKLYNSNNSDLHRHXXXXXXXXXXXXXXXXXXQ 557
            +MATAAVIGLS+GKRLL+SS++YSDLTEKL N N+   H                     
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVND---HGITYYPTATTKNVIVAKKSSN 57

Query: 558  INTSFPF-HRQIQSTTALKEHVETATSAPSVTQPWFYRLPNQIDEECSDPDEYPVEALLQ 734
               SFP  +R   S  ALKEHV+TA+++ +V   WF    +  +EE S  D Y VEALL 
Sbjct: 58   YGPSFPSSNRNSHSIKALKEHVDTASASSNVAT-WFKTF-DDFEEESSALD-YSVEALLL 114

Query: 735  LQRSILEKQWSLS------SESTRSNNCKQMQVTSSGSSAXXXXXXXXXXXXXXXXXXXX 896
            LQ+S+LEKQW+LS      S+ST   N K++ VT SG SA                    
Sbjct: 115  LQKSMLEKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQ 174

Query: 897  XXXXXXXXPIIGPELLQNRFKGYLKGVVSEELLTHNQVVLLSKTMKDGLRLEEQKTRLRK 1076
                     +  P+LLQNR KGY+KGVVS+E+L H +VV LS+ ++ GL  E+ K+RL++
Sbjct: 175  SSDFKFLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKE 234

Query: 1077 RLGCEPSEEQLASALNISRAELQLKFVECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 1256
            RLGCEPS+EQ+A +L ISRA+LQ K ++CSLAREKLAMSN+RLVMSIAQ+YDNMGAEMAD
Sbjct: 235  RLGCEPSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMAD 294

Query: 1257 XXXXXXXXXXXXXEKYDASKGFKISTYVYWWIRQGVSRALVENSRTMRLPTHLHERLSLI 1436
                         EK+D+SKGFKISTYVYWWIRQGVSRALV+NSRT+RLP HLHERL LI
Sbjct: 295  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLI 354

Query: 1437 RNAKIRLEEKGVTPSTDKIAEYLNMSQKKVRNATEAICKVISLDREAFPSLNALPGETMH 1616
            RNAKIRLEEKGVTPS D+IAE LNMSQ+KVRNATEAI KV SLDREAFPSLN LPGET H
Sbjct: 355  RNAKIRLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHH 414

Query: 1617 SYIADYRQENNPWHGVDEWALK 1682
            SYIAD R ENNPWHGVDEWALK
Sbjct: 415  SYIADNRPENNPWHGVDEWALK 436


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  460 bits (1183), Expect = e-127
 Identities = 257/441 (58%), Positives = 303/441 (68%), Gaps = 6/441 (1%)
 Frame = +3

Query: 378  IMATAAVIGLSAGKRLLNSSYFYSDLTEKLYNSNNSDLHRHXXXXXXXXXXXXXXXXXXQ 557
            +M+TAAVIGLSAGKRLL+SS++YSDL EKL  +++  L  H                   
Sbjct: 1    MMSTAAVIGLSAGKRLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSS---D 57

Query: 558  INTSFPFHRQIQSTTALKEHVETATSAPSVTQPWFYRLPNQIDEECSDPDEYPVEALLQL 737
             + S    R+ QS  +LKEHV+  T+ PS    WF  +  Q+  E  D DE  VE LL L
Sbjct: 58   YSPSCVSSRKSQSAKSLKEHVDI-TADPSDVPSWF-EMYEQLQNESDDEDE-SVEVLLLL 114

Query: 738  QRSILEKQWSLSSEST------RSNNCKQMQVTSSGSSAXXXXXXXXXXXXXXXXXXXXX 899
            Q+S+LEKQW+LS E T           K+M +T SG+SA                     
Sbjct: 115  QKSMLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPT 174

Query: 900  XXXXXXXPIIGPELLQNRFKGYLKGVVSEELLTHNQVVLLSKTMKDGLRLEEQKTRLRKR 1079
                    IIGPELLQNR KGY+KGVVSEELLTH +V+ LSK ++ GL LEEQK+RL++R
Sbjct: 175  SAAKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKER 234

Query: 1080 LGCEPSEEQLASALNISRAELQLKFVECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 1259
            LGCEPS++QLA +L +SR +LQ   +ECSLARE+LAMSN+RLVMSIAQRYDN+GAEMAD 
Sbjct: 235  LGCEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADL 294

Query: 1260 XXXXXXXXXXXXEKYDASKGFKISTYVYWWIRQGVSRALVENSRTMRLPTHLHERLSLIR 1439
                        EK+D SKG+KISTYVYWWIRQGVSRALVENSRT+RLPT+LHERLSLIR
Sbjct: 295  VQGGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIR 354

Query: 1440 NAKIRLEEKGVTPSTDKIAEYLNMSQKKVRNATEAICKVISLDREAFPSLNALPGETMHS 1619
            NAK RLEEKG+TPS + IA  LNMSQKKVRNATEA  K+ SLDREAFPSLN LPGET+HS
Sbjct: 355  NAKARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHS 414

Query: 1620 YIADYRQENNPWHGVDEWALK 1682
            YIAD   ENNPWHGVD WALK
Sbjct: 415  YIADNHLENNPWHGVDVWALK 435


>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
          Length = 502

 Score =  459 bits (1182), Expect = e-127
 Identities = 252/433 (58%), Positives = 300/433 (69%), Gaps = 3/433 (0%)
 Frame = +3

Query: 393  AVIGLSAGKRLLNSSYFYSDLTEKLYNSNNSDLHRHXXXXXXXXXXXXXXXXXXQINTSF 572
            A+IGLSAG R+L+SS++YS LTEK   S+++    H                    + S+
Sbjct: 3    AIIGLSAGNRILSSSFYYSVLTEKFCVSDHALPCHHFPSPKNVINAKNSS----NYSPSY 58

Query: 573  PFHRQIQSTTALKEHVETATSAPSVTQPWFYRLPNQIDEECSDPDEYPVEALLQLQRSIL 752
              +R+ QS  ALKEHV+ A++  S T+PW        +  CS+ D   VE LL LQ+S+L
Sbjct: 59   VSNRKKQSVKALKEHVDIASNRDSDTEPWVQMFKQLQNGSCSEEDS--VEVLLLLQKSML 116

Query: 753  EKQWSLSSES--TRSNNCKQ-MQVTSSGSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 923
            EKQW+LS+E   T  NNCK+ MQ+T SG+SA                             
Sbjct: 117  EKQWNLSAEKAMTNENNCKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRS 176

Query: 924  IIGPELLQNRFKGYLKGVVSEELLTHNQVVLLSKTMKDGLRLEEQKTRLRKRLGCEPSEE 1103
            +IGPELLQNR KGY+ GVV +ELLTH +VV LSK +K GL LEEQK+RL++RLGCEPS++
Sbjct: 177  VIGPELLQNRSKGYINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDD 236

Query: 1104 QLASALNISRAELQLKFVECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXXX 1283
            QLA +L ISRA+L+   +ECSLAREKLAMSN+RLVMSIAQRYD  G EMAD         
Sbjct: 237  QLAISLKISRADLRSTLIECSLAREKLAMSNVRLVMSIAQRYDTNGTEMADLIQGGLIGL 296

Query: 1284 XXXXEKYDASKGFKISTYVYWWIRQGVSRALVENSRTMRLPTHLHERLSLIRNAKIRLEE 1463
                EK+D S+GFKISTYVYWWIRQGVSRALVENSRT+RLP HLHERLSLIRNAKI+L+E
Sbjct: 297  LRGIEKFDHSRGFKISTYVYWWIRQGVSRALVENSRTLRLPIHLHERLSLIRNAKIKLKE 356

Query: 1464 KGVTPSTDKIAEYLNMSQKKVRNATEAICKVISLDREAFPSLNALPGETMHSYIADYRQE 1643
             G+TPS +KIAE LNMSQKKVRNATEA  KV SLDREAFPSLN LPGET+HSYIAD R E
Sbjct: 357  NGITPSIEKIAECLNMSQKKVRNATEASSKVFSLDREAFPSLNGLPGETLHSYIADNRLE 416

Query: 1644 NNPWHGVDEWALK 1682
            N PWHGVDEW LK
Sbjct: 417  NIPWHGVDEWMLK 429


>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  456 bits (1174), Expect = e-126
 Identities = 259/437 (59%), Positives = 304/437 (69%)
 Frame = +3

Query: 372  SSIMATAAVIGLSAGKRLLNSSYFYSDLTEKLYNSNNSDLHRHXXXXXXXXXXXXXXXXX 551
            S +M TAAVIGLSAG RLL SS+ YSD+ EKL +  N     H                 
Sbjct: 70   SHMMGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPS- 128

Query: 552  XQINTSFPFHRQIQSTTALKEHVETATSAPSVTQPWFYRLPNQIDEECSDPDEYPVEALL 731
               N +   +R IQS  ALKEHVE+A SAPS   P      +++++E     EY VEA L
Sbjct: 129  ---NYTPSSNRSIQSMKALKEHVESA-SAPSTADPDLSSSSSEVEDE-----EYLVEAFL 179

Query: 732  QLQRSILEKQWSLSSESTRSNNCKQMQVTSSGSSAXXXXXXXXXXXXXXXXXXXXXXXXX 911
             LQ+S+LEKQW+LS ++ +    K+ +VT SG+SA                         
Sbjct: 180  LLQKSMLEKQWNLSFKARQ----KRREVTCSGTSARQRRISGRKRVMNEKSKSRVRAALG 235

Query: 912  XXXPIIGPELLQNRFKGYLKGVVSEELLTHNQVVLLSKTMKDGLRLEEQKTRLRKRLGCE 1091
                      ++NR KGY+KGVVSEELLTH QVVLLS  +K GL LE+ K+RL++R+G E
Sbjct: 236  ----------VENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSE 285

Query: 1092 PSEEQLASALNISRAELQLKFVECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXX 1271
            P++EQ+A++L +SRAELQ K +ECSLAREKLAMSN+RLVMSIAQRYDNMGAEMAD     
Sbjct: 286  PTDEQVAASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 345

Query: 1272 XXXXXXXXEKYDASKGFKISTYVYWWIRQGVSRALVENSRTMRLPTHLHERLSLIRNAKI 1451
                    EK+D+SKGFKISTYVYWWIRQGVSRALVENSRT+RLP+HLHERLSLIRNAKI
Sbjct: 346  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKI 405

Query: 1452 RLEEKGVTPSTDKIAEYLNMSQKKVRNATEAICKVISLDREAFPSLNALPGETMHSYIAD 1631
            RLEEKG+TPS D+IAE LNMSQKKVRNATEAI KV SLDREAFPSLN LPGET+HSYIAD
Sbjct: 406  RLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIAD 465

Query: 1632 YRQENNPWHGVDEWALK 1682
             R ENNPWHGVDEWALK
Sbjct: 466  VRLENNPWHGVDEWALK 482