BLASTX nr result

ID: Cephaelis21_contig00027077 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027077
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   102   4e-20
ref|XP_002303904.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    87   2e-15
ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    87   2e-15
ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    86   2e-15

>ref|XP_002268974.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24 [Vitis
           vinifera] gi|296081305|emb|CBI17749.3| unnamed protein
           product [Vitis vinifera]
          Length = 553

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/80 (63%), Positives = 60/80 (75%), Gaps = 4/80 (5%)
 Frame = -3

Query: 232 DLSGT----GKCLDSKDGVNRASNGPVATARHLLPRGLINLGNLCFLNATLQALLSCSPF 65
           DL+GT       +  K  + +A NGP    ++LLPRGLIN GNLCFLNATLQALLSC+PF
Sbjct: 164 DLNGTIDDSSTFVPLKKEILKAPNGPAPAVKNLLPRGLINSGNLCFLNATLQALLSCTPF 223

Query: 64  VQLLQELRYRDIPDIGYPTL 5
           +QLLQELR RDIP +GYPTL
Sbjct: 224 IQLLQELRIRDIPKVGYPTL 243


>ref|XP_002303904.1| predicted protein [Populus trichocarpa] gi|222841336|gb|EEE78883.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 44/58 (75%), Positives = 50/58 (86%)
 Frame = -3

Query: 199 KDGVNRASNGPVATARHLLPRGLINLGNLCFLNATLQALLSCSPFVQLLQELRYRDIP 26
           K+ V +A++GP+   + LLPRGLIN GNLCFLNATLQALLSCSPFVQLLQELR RDIP
Sbjct: 173 KEDVWKANDGPLPAVKSLLPRGLINTGNLCFLNATLQALLSCSPFVQLLQELRIRDIP 230


>ref|XP_003534373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Glycine
           max]
          Length = 532

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/61 (68%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -3

Query: 184 RASNG-PVATARHLLPRGLINLGNLCFLNATLQALLSCSPFVQLLQELRYRDIPDIGYPT 8
           +A NG  V   + +LPRGLIN GNLCFLNAT+QALLSCSPFV LLQ+LR R++P +GYPT
Sbjct: 163 KAPNGHAVMHVKDILPRGLINSGNLCFLNATMQALLSCSPFVHLLQQLRTRNLPKVGYPT 222

Query: 7   L 5
           L
Sbjct: 223 L 223


>ref|XP_003595735.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
           gi|355484783|gb|AES65986.1| Ubiquitin carboxyl-terminal
           hydrolase [Medicago truncatula]
          Length = 532

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 47/79 (59%), Positives = 57/79 (72%), Gaps = 4/79 (5%)
 Frame = -3

Query: 226 SGTGKCLDSK---DGVNRASNG-PVATARHLLPRGLINLGNLCFLNATLQALLSCSPFVQ 59
           +G+G    SK     + +A NG  V   + L PRGLIN GNLCFL+AT+QALL+CSPFVQ
Sbjct: 149 NGSGGDSSSKLFEQNLKKAPNGHAVMHVKDLQPRGLINSGNLCFLSATVQALLACSPFVQ 208

Query: 58  LLQELRYRDIPDIGYPTLR 2
           LLQELR R IP +GYPTL+
Sbjct: 209 LLQELRTRTIPKVGYPTLK 227


>ref|XP_004163102.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Cucumis
           sativus]
          Length = 542

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/65 (64%), Positives = 50/65 (76%)
 Frame = -3

Query: 199 KDGVNRASNGPVATARHLLPRGLINLGNLCFLNATLQALLSCSPFVQLLQELRYRDIPDI 20
           K+   RASN  V ++  LLPRGLIN GNLCFLN+TLQALLSC PFV LL+ L+ R+IP +
Sbjct: 170 KENFRRASNVSVTSSTTLLPRGLINSGNLCFLNSTLQALLSCPPFVDLLRNLQNREIPKV 229

Query: 19  GYPTL 5
           GY TL
Sbjct: 230 GYSTL 234


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