BLASTX nr result
ID: Cephaelis21_contig00027040
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00027040
(718 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 348 8e-94
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 348 8e-94
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 348 8e-94
ref|XP_002311536.1| rna-dependent RNA polymerase [Populus tricho... 334 1e-89
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 333 2e-89
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 348 bits (892), Expect = 8e-94
Identities = 162/207 (78%), Positives = 185/207 (89%), Gaps = 4/207 (1%)
Frame = -1
Query: 718 AELFSIAVDFPKTGVPAEIPSHLRVKEYPDFMEKSDKPTYESKHVIGKLFREVKDIAPDT 539
A+LFSIAVDFPKTGVPAEIP +LRVKEYPDFMEK+DKPTYES+ VIGKLFREVKDIAP
Sbjct: 684 AKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHN 743
Query: 538 CLVKSFTREMARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDNYGIKTEAEILSG 359
C ++SFTR++AR+SYDPDMEV GFEDY+ +AF YKSEYDYKLGNLMD YGIKTE+EILSG
Sbjct: 744 CNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSG 803
Query: 358 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFKKKG----GQLDDPFAKASAWYHVTYH 191
IM+MS+ FDR+KDAEA+G+AV+SLRKEARTWF K G + DD +AKASAWYHVTYH
Sbjct: 804 SIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 863
Query: 190 PSYWGCYNEGLNRAHFISFPWCVYDKL 110
P YWGCYNEG++R HF+SFPWCVYDKL
Sbjct: 864 PDYWGCYNEGMDRDHFLSFPWCVYDKL 890
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 348 bits (892), Expect = 8e-94
Identities = 162/207 (78%), Positives = 185/207 (89%), Gaps = 4/207 (1%)
Frame = -1
Query: 718 AELFSIAVDFPKTGVPAEIPSHLRVKEYPDFMEKSDKPTYESKHVIGKLFREVKDIAPDT 539
A+LFSIAVDFPKTGVPAEIP +LRVKEYPDFMEK+DKPTYES+ VIGKLFREVKDIAP
Sbjct: 886 AKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHN 945
Query: 538 CLVKSFTREMARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDNYGIKTEAEILSG 359
C ++SFTR++AR+SYDPDMEV GFEDY+ +AF YKSEYDYKLGNLMD YGIKTE+EILSG
Sbjct: 946 CNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSG 1005
Query: 358 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFKKKG----GQLDDPFAKASAWYHVTYH 191
IM+MS+ FDR+KDAEA+G+AV+SLRKEARTWF K G + DD +AKASAWYHVTYH
Sbjct: 1006 SIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 1065
Query: 190 PSYWGCYNEGLNRAHFISFPWCVYDKL 110
P YWGCYNEG++R HF+SFPWCVYDKL
Sbjct: 1066 PDYWGCYNEGMDRDHFLSFPWCVYDKL 1092
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 348 bits (892), Expect = 8e-94
Identities = 162/207 (78%), Positives = 185/207 (89%), Gaps = 4/207 (1%)
Frame = -1
Query: 718 AELFSIAVDFPKTGVPAEIPSHLRVKEYPDFMEKSDKPTYESKHVIGKLFREVKDIAPDT 539
A+LFSIAVDFPKTGVPAEIP +LRVKEYPDFMEK+DKPTYES+ VIGKLFREVKDIAP
Sbjct: 419 AKLFSIAVDFPKTGVPAEIPRNLRVKEYPDFMEKADKPTYESQSVIGKLFREVKDIAPHN 478
Query: 538 CLVKSFTREMARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDNYGIKTEAEILSG 359
C ++SFTR++AR+SYDPDMEV GFEDY+ +AF YKSEYDYKLGNLMD YGIKTE+EILSG
Sbjct: 479 CNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYKSEYDYKLGNLMDYYGIKTESEILSG 538
Query: 358 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFKKKG----GQLDDPFAKASAWYHVTYH 191
IM+MS+ FDR+KDAEA+G+AV+SLRKEARTWF K G + DD +AKASAWYHVTYH
Sbjct: 539 SIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNKMGSETDSEADDVYAKASAWYHVTYH 598
Query: 190 PSYWGCYNEGLNRAHFISFPWCVYDKL 110
P YWGCYNEG++R HF+SFPWCVYDKL
Sbjct: 599 PDYWGCYNEGMDRDHFLSFPWCVYDKL 625
>ref|XP_002311536.1| rna-dependent RNA polymerase [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| rna-dependent RNA polymerase
[Populus trichocarpa]
Length = 1133
Score = 334 bits (856), Expect = 1e-89
Identities = 156/207 (75%), Positives = 180/207 (86%), Gaps = 4/207 (1%)
Frame = -1
Query: 718 AELFSIAVDFPKTGVPAEIPSHLRVKEYPDFMEKSDKPTYESKHVIGKLFREVKDIAPDT 539
A FSIAVDFPKTGVPAEIPS+LR +EYPDFMEK DKP+YES++VIGKLFREVKDIAP T
Sbjct: 896 ARKFSIAVDFPKTGVPAEIPSNLRAREYPDFMEKPDKPSYESRNVIGKLFREVKDIAPRT 955
Query: 538 CLVKSFTREMARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDNYGIKTEAEILSG 359
++SFT ++AR+ YDPDMEVDGFEDY+D+AF YKS YDYKLGNLM+ YGIKTEAE+LSG
Sbjct: 956 SSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYKSNYDYKLGNLMEYYGIKTEAELLSG 1015
Query: 358 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFKKKG----GQLDDPFAKASAWYHVTYH 191
MKMS+ F +K+DAEA+GMAVRSL+KEAR+WF +KG Q DD AKASAWYHVTYH
Sbjct: 1016 SFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNEKGSGLDSQADDVDAKASAWYHVTYH 1075
Query: 190 PSYWGCYNEGLNRAHFISFPWCVYDKL 110
+YWGCYNEG+NR HF+SFPWCVYDKL
Sbjct: 1076 HNYWGCYNEGMNRDHFLSFPWCVYDKL 1102
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 333 bits (854), Expect = 2e-89
Identities = 155/207 (74%), Positives = 181/207 (87%), Gaps = 4/207 (1%)
Frame = -1
Query: 718 AELFSIAVDFPKTGVPAEIPSHLRVKEYPDFMEKSDKPTYESKHVIGKLFREVKDIAPDT 539
A+LFSIAVDFPKTGVPAEIP LRVKEYPDFMEK DKP+Y+S +VIGKLFREVK++AP+
Sbjct: 874 AKLFSIAVDFPKTGVPAEIPQELRVKEYPDFMEKPDKPSYQSHNVIGKLFREVKNLAPNE 933
Query: 538 CLVKSFTREMARKSYDPDMEVDGFEDYLDEAFDYKSEYDYKLGNLMDNYGIKTEAEILSG 359
C +K TRE ++ YDPDMEV+GFEDY+D+AF +KS+YDYKLGNLMD YG+KTEAEIL G
Sbjct: 934 CSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHKSKYDYKLGNLMDYYGVKTEAEILGG 993
Query: 358 GIMKMSRFFDRKKDAEAVGMAVRSLRKEARTWFKKKGGQL----DDPFAKASAWYHVTYH 191
GIMKMSR F +K+DAEA+ MAVRSLRKEAR+WF +KG +L DD +AKASAWY+VTYH
Sbjct: 994 GIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNEKGSELDEEIDDAYAKASAWYYVTYH 1053
Query: 190 PSYWGCYNEGLNRAHFISFPWCVYDKL 110
PSYWG YNEG+NR HF+SFPWCVYDKL
Sbjct: 1054 PSYWGQYNEGMNRDHFLSFPWCVYDKL 1080