BLASTX nr result

ID: Cephaelis21_contig00027027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00027027
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   126   2e-27
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...   124   1e-26
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   122   2e-26
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   121   7e-26
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   117   1e-24

>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  126 bits (316), Expect = 2e-27
 Identities = 53/141 (37%), Positives = 88/141 (62%)
 Frame = +2

Query: 5    EFNHHPRCGHLRMTHLAYADDIMLFCRGDVTSVQILWDSLQSFGGCAGLQPNPHKSNIFM 184
            +FNHH +C  + +T+L +ADD++LFCRGD  SV ++ ++++ F    GL+ NP K  +F 
Sbjct: 995  DFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFF 1054

Query: 185  ADVDDRERDVICAYTGISLGEFPVRYLGIPLGAGRLRVSHYRPMIESIAQQIGLWTPASL 364
              +D   ++ +   T  + G+ PVRYLG+PL   RL +  Y P+I+ I  ++  WT   L
Sbjct: 1055 GGMDGCSKENLRRITDFAEGKLPVRYLGVPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLL 1114

Query: 365  SFAGRLQLIIAVLQGIQCFWL 427
            S+AGR+QL+ ++   I  +W+
Sbjct: 1115 SYAGRIQLVKSITSAIAMYWM 1135


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score =  124 bits (310), Expect = 1e-26
 Identities = 53/141 (37%), Positives = 87/141 (61%)
 Frame = +2

Query: 5    EFNHHPRCGHLRMTHLAYADDIMLFCRGDVTSVQILWDSLQSFGGCAGLQPNPHKSNIFM 184
            +FNHH +C  + +T+L +ADD++LFCRGD  SV ++ ++++ F    GL+ NP K  +F 
Sbjct: 878  DFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSMMMETIRKFSDSTGLKVNPAKCQMFF 937

Query: 185  ADVDDRERDVICAYTGISLGEFPVRYLGIPLGAGRLRVSHYRPMIESIAQQIGLWTPASL 364
              +D   ++ +   T  + G+ PVRYLG+PL   RL +  Y P+I+ I  ++  WT   L
Sbjct: 938  GGMDGCSKENLRRITDFAEGKLPVRYLGMPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLL 997

Query: 365  SFAGRLQLIIAVLQGIQCFWL 427
            S AGR+QL+ ++   I  +W+
Sbjct: 998  SHAGRIQLVKSITSAIAMYWM 1018


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/140 (40%), Positives = 85/140 (60%)
 Frame = +2

Query: 5    EFNHHPRCGHLRMTHLAYADDIMLFCRGDVTSVQILWDSLQSFGGCAGLQPNPHKSNIFM 184
            +FN HP+C  L +THL +ADD+++FCR D +S+  +  + Q F   +GL  +  KSNI+ 
Sbjct: 671  DFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYF 730

Query: 185  ADVDDRERDVICAYTGISLGEFPVRYLGIPLGAGRLRVSHYRPMIESIAQQIGLWTPASL 364
              VDD     +  Y  + LGE P RYLG+PL + +L  +  +P++E I  +   W    L
Sbjct: 731  CGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLL 790

Query: 365  SFAGRLQLIIAVLQGIQCFW 424
            S+AGRLQLI ++L  +Q +W
Sbjct: 791  SYAGRLQLIKSILSSMQNYW 810


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score =  121 bits (303), Expect = 7e-26
 Identities = 60/141 (42%), Positives = 85/141 (60%)
 Frame = +2

Query: 5   EFNHHPRCGHLRMTHLAYADDIMLFCRGDVTSVQILWDSLQSFGGCAGLQPNPHKSNIFM 184
           EF +HPRC  L +THL +ADD+M+   G + SV  +   L  F    GL+    K+ +++
Sbjct: 407 EFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYL 466

Query: 185 ADVDDRERDVICAYTGISLGEFPVRYLGIPLGAGRLRVSHYRPMIESIAQQIGLWTPASL 364
           A V D  R ++ +     +G+ PVRYLG+PL   RL  S Y P+I+ I ++IG+WT   L
Sbjct: 467 AGVSDHSRQLMSSRYSFGVGKLPVRYLGLPLVTKRLTTSDYSPLIDQIRRRIGMWTSRYL 526

Query: 365 SFAGRLQLIIAVLQGIQCFWL 427
           SFAGRL LI +VL  I  FW+
Sbjct: 527 SFAGRLSLINSVLWSITNFWM 547


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
           [Arabidopsis thaliana]
          Length = 1164

 Score =  117 bits (292), Expect = 1e-24
 Identities = 55/138 (39%), Positives = 87/138 (63%)
 Frame = +2

Query: 14  HHPRCGHLRMTHLAYADDIMLFCRGDVTSVQILWDSLQSFGGCAGLQPNPHKSNIFMADV 193
           +HP+   L ++HL +ADD+M+F  G  +S+  + +SL+ F G +GL  N +K+ ++ A +
Sbjct: 580 YHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKTQLYHAGL 639

Query: 194 DDRERDVICAYTGISLGEFPVRYLGIPLGAGRLRVSHYRPMIESIAQQIGLWTPASLSFA 373
              E D + +Y G  LG  PVRYLG+PL + +L ++ Y P+IE I  +   W    LSFA
Sbjct: 640 SQSESDSMASY-GFKLGSLPVRYLGLPLMSRKLTIAEYAPLIEKITARFNSWVVRLLSFA 698

Query: 374 GRLQLIIAVLQGIQCFWL 427
           GR+QL+ +V+ GI  FW+
Sbjct: 699 GRVQLLASVISGIVNFWI 716


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