BLASTX nr result
ID: Cephaelis21_contig00025905
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00025905
(1000 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinu... 44 6e-07
ref|NP_173743.1| 60S ribosomal protein L27a-2 [Arabidopsis thali... 44 1e-06
ref|NP_177217.1| 60S ribosomal protein L27a-3 [Arabidopsis thali... 44 1e-06
gb|ADR71245.1| 60S ribosomal protein L27B [Hevea brasiliensis] 43 1e-06
gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii] 43 1e-06
>ref|XP_002527925.1| 60S ribosomal protein L27a, putative [Ricinus communis]
gi|223532700|gb|EEF34482.1| 60S ribosomal protein L27a,
putative [Ricinus communis]
Length = 146
Score = 43.5 bits (101), Expect(2) = 6e-07
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 566 VNIDKLWPLLPSDVKNKQ*RERINLEMLLLPDLCDPVWLF*GVGQRDFLENYLYFMRLKL 745
VNIDKLW ++P DVK+K ++ + L + F +G+ EN ++ KL
Sbjct: 73 VNIDKLWSMIPEDVKDKANKDNVPLLDV------TQFGYFKVLGKGVLPENQPIVVKAKL 126
Query: 746 -SQMAEKKIKWGGVAVVLS 799
S++AEKKIK G AVVL+
Sbjct: 127 VSKIAEKKIKEAGGAVVLT 145
Score = 37.0 bits (84), Expect(2) = 6e-07
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 472 HLIFLN*YHREYFGKVNMRDFHELCNQFH 558
H I + YH YFGKV MR FH+L N+F+
Sbjct: 41 HRILFDKYHPGYFGKVGMRYFHKLRNKFY 69
>ref|NP_173743.1| 60S ribosomal protein L27a-2 [Arabidopsis thaliana]
gi|297845396|ref|XP_002890579.1| RPL27A [Arabidopsis
lyrata subsp. lyrata]
gi|20143883|sp|Q9LR33.1|R27A2_ARATH RecName: Full=60S
ribosomal protein L27a-2
gi|9295692|gb|AAF86998.1|AC005292_7 F26F24.13
[Arabidopsis thaliana]
gi|11692928|gb|AAG40067.1|AF324716_1 At1g23290
[Arabidopsis thaliana]
gi|13194820|gb|AAK15572.1|AF349525_1 putative 60s
ribosomal protein l27a [Arabidopsis thaliana]
gi|15294178|gb|AAK95266.1|AF410280_1 At1g23290/F26F24_23
[Arabidopsis thaliana] gi|23308283|gb|AAN18111.1|
At1g23290/F26F24_23 [Arabidopsis thaliana]
gi|297336421|gb|EFH66838.1| RPL27A [Arabidopsis lyrata
subsp. lyrata] gi|332192247|gb|AEE30368.1| 60S ribosomal
protein L27a-2 [Arabidopsis thaliana]
Length = 146
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 566 VNIDKLWPLLPSDVKNKQ*RERINLEMLLLPDLCDPVWLF*GVGQRDFLENYLYFMRLKL 745
VN+DKLW L+P DVK K ++ + L + F +G+ EN + ++ KL
Sbjct: 73 VNLDKLWSLVPEDVKAKSSKDNVPLIDVTQHG------FFKVLGKGHLPENKPFVVKAKL 126
Query: 746 -SQMAEKKIKWGGVAVVLS 799
S+ AEKKIK G AVVL+
Sbjct: 127 ISKTAEKKIKEAGGAVVLT 145
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 472 HLIFLN*YHREYFGKVNMRDFHELCNQF 555
H I + YH YFGKV MR FH+L N+F
Sbjct: 41 HRILFDKYHPGYFGKVGMRYFHKLRNKF 68
>ref|NP_177217.1| 60S ribosomal protein L27a-3 [Arabidopsis thaliana]
gi|297841813|ref|XP_002888788.1| 60S ribosomal protein
L27A [Arabidopsis lyrata subsp. lyrata]
gi|1710530|sp|P49637.2|R27A3_ARATH RecName: Full=60S
ribosomal protein L27a-3
gi|12324756|gb|AAG52338.1|AC011663_17 60S ribosomal
protein L27A; 82981-83421 [Arabidopsis thaliana]
gi|12325037|gb|AAG52464.1|AC010796_3 60S ribosomal
protein L27A; 71521-71081 [Arabidopsis thaliana]
gi|1107487|emb|CAA63025.1| 60S ribosomal protein L27a
[Arabidopsis thaliana] gi|14517370|gb|AAK62576.1|
At1g70600/F5A18_22 [Arabidopsis thaliana]
gi|15081672|gb|AAK82491.1| At1g70600/F5A18_22
[Arabidopsis thaliana] gi|20147177|gb|AAM10305.1|
At1g70600/F5A18_22 [Arabidopsis thaliana]
gi|297334629|gb|EFH65047.1| 60S ribosomal protein L27A
[Arabidopsis lyrata subsp. lyrata]
gi|332196966|gb|AEE35087.1| 60S ribosomal protein L27a-3
[Arabidopsis thaliana]
Length = 146
Score = 43.5 bits (101), Expect(2) = 1e-06
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 566 VNIDKLWPLLPSDVKNKQ*RERINLEMLLLPDLCDPVWLF*GVGQRDFLENYLYFMRLKL 745
VN+DKLW L+P DVK K ++ + L + F +G+ EN + ++ KL
Sbjct: 73 VNLDKLWSLVPEDVKAKSTKDNVPLIDVTQHG------FFKVLGKGHLPENKPFVVKAKL 126
Query: 746 -SQMAEKKIKWGGVAVVLS 799
S+ AEKKIK G AVVL+
Sbjct: 127 ISKTAEKKIKEAGGAVVLT 145
Score = 36.2 bits (82), Expect(2) = 1e-06
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1
Query: 472 HLIFLN*YHREYFGKVNMRDFHELCNQF 555
H I + YH YFGKV MR FH+L N+F
Sbjct: 41 HRILFDKYHPGYFGKVGMRYFHKLRNKF 68
>gb|ADR71245.1| 60S ribosomal protein L27B [Hevea brasiliensis]
Length = 146
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 566 VNIDKLWPLLPSDVKNKQ*RERINLEMLLLPDLCDPVWLF*GVGQRDFLENYLYFMRLKL 745
VNIDKLW L+P +VK+K ++ N+ M+ + F +G+ EN ++ KL
Sbjct: 73 VNIDKLWSLIPQEVKDKASKD--NVPMIDVTQ----YGYFKVLGKGALPENKPIVVKAKL 126
Query: 746 -SQMAEKKIKWGGVAVVLS 799
S++AEKKIK G AVVL+
Sbjct: 127 VSKIAEKKIKENGGAVVLT 145
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 472 HLIFLN*YHREYFGKVNMRDFHELCNQFH 558
H I + YH YFGKV MR FH+L N+F+
Sbjct: 41 HRILFDKYHPGYFGKVGMRYFHKLRNKFY 69
>gb|ACJ02353.1| 60S ribosomal protein L27A [Vernicia fordii]
Length = 146
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 566 VNIDKLWPLLPSDVKNKQ*RERINLEMLLLPDLCDPVWLF*GVGQRDFLENYLYFMRLKL 745
VNIDKLW ++P +VK+K ++ N+ ML + F +G+ EN ++ KL
Sbjct: 73 VNIDKLWSMVPQEVKDKASKD--NVPMLDVTQF----GYFKVLGKGVLPENQPIVVKAKL 126
Query: 746 -SQMAEKKIKWGGVAVVLS 799
S++AEKKIK G AVVL+
Sbjct: 127 VSKIAEKKIKENGGAVVLT 145
Score = 37.0 bits (84), Expect(2) = 1e-06
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 472 HLIFLN*YHREYFGKVNMRDFHELCNQFH 558
H I + YH YFGKV MR FH+L N+F+
Sbjct: 41 HRILFDKYHPGYFGKVGMRYFHKLRNKFY 69