BLASTX nr result

ID: Cephaelis21_contig00025897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025897
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-...   234   1e-59
ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   228   1e-57
ref|XP_002511850.1| Protein AFR, putative [Ricinus communis] gi|...   219   3e-55
ref|XP_002320790.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   191   9e-47

>ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera]
           gi|297745280|emb|CBI40360.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  234 bits (598), Expect = 1e-59
 Identities = 112/186 (60%), Positives = 142/186 (76%), Gaps = 4/186 (2%)
 Frame = -2

Query: 704 FAIGGLGPKSSNPLSWDAYNPQTNSWKSHGDPNVLCDIEDSVVFDGKIYVRCGSSQASCH 525
           +AIGGLG KS++P SWD YNP TNSWKSH DPN++ DIEDS+V D KIY+RCG+S  + H
Sbjct: 174 YAIGGLGSKSNDPHSWDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYIRCGTSGLTSH 233

Query: 524 VYAIAYETSSGTWEDADPDMVRGWHGPAVVVNGTLYVLDQTSGTRMIKWQKDTRQWVSVG 345
           VYA+ Y  S GTW+ AD DMV GW GPAVVV+GTLYVLDQ  GTR++ WQK++R+WV+VG
Sbjct: 234 VYAVVYNPSHGTWQHADADMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQKESRKWVAVG 293

Query: 344 RFASKMTRPPCRLVPIGKNILIIGQGLNTTVFCTENAGE----IVTLSIPVGSTSDIEVV 177
           R +  +T PPCRLV IGK+I +IG+GL+T VF   N G     +V+ SIP   TSD +V+
Sbjct: 294 RLSPLLTCPPCRLVAIGKSIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIP-KLTSDDDVI 352

Query: 176 SCRSVA 159
           SC+ +A
Sbjct: 353 SCKILA 358


>ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein
           SKIP4-like [Vitis vinifera]
          Length = 359

 Score =  228 bits (580), Expect = 1e-57
 Identities = 107/186 (57%), Positives = 139/186 (74%), Gaps = 4/186 (2%)
 Frame = -2

Query: 704 FAIGGLGPKSSNPLSWDAYNPQTNSWKSHGDPNVLCDIEDSVVFDGKIYVRCGSSQASCH 525
           +AIGGLG KS++P SWD YNP TNSWKSH DPN++ DIED++V D KIY+RCG+S  + H
Sbjct: 174 YAIGGLGSKSNDPHSWDTYNPHTNSWKSHSDPNIVPDIEDTIVLDEKIYIRCGTSALTSH 233

Query: 524 VYAIAYETSSGTWEDADPDMVRGWHGPAVVVNGTLYVLDQTSGTRMIKWQKDTRQWVSVG 345
           VY + Y  S GTW+ AD DMV GW GPAVVV+G  +VLDQ  GTR++ WQK++ +WV+VG
Sbjct: 234 VYVVVYNPSHGTWQHADADMVLGWQGPAVVVDGXFFVLDQRLGTRLMMWQKESTKWVAVG 293

Query: 344 RFASKMTRPPCRLVPIGKNILIIGQGLNTTVFCTENAGE----IVTLSIPVGSTSDIEVV 177
           R +  +T PPCRLV IGK+I +IG+GL+T VF   NAG     +V+ SIP   TSD +V+
Sbjct: 294 RLSPLLTCPPCRLVAIGKSIFVIGKGLSTVVFDIGNAGNMGGVMVSSSIP-KLTSDDDVI 352

Query: 176 SCRSVA 159
           SC+ +A
Sbjct: 353 SCKILA 358


>ref|XP_002511850.1| Protein AFR, putative [Ricinus communis]
           gi|223549030|gb|EEF50519.1| Protein AFR, putative
           [Ricinus communis]
          Length = 353

 Score =  219 bits (559), Expect = 3e-55
 Identities = 103/186 (55%), Positives = 136/186 (73%), Gaps = 4/186 (2%)
 Frame = -2

Query: 704 FAIGGLGPKSSNPLSWDAYNPQTNSWKSHGDPNVLCDIEDSVVFDGKIYVRCGSSQASCH 525
           +AIGGLG K S+P SWD ++   N W+SH D N++ D+EDS+V DGKIY+RCG+S  S H
Sbjct: 168 YAIGGLGSKLSDPHSWDTFDAHKNCWESHSDANIVPDVEDSIVLDGKIYIRCGASSVSSH 227

Query: 524 VYAIAYETSSGTWEDADPDMVRGWHGPAVVVNGTLYVLDQTSGTRMIKWQKDTRQWVSVG 345
           VYA+ YE  +GTW+ AD DM  GW GPAVVV   LYVLDQ+SGTR++ W+KD R+W++VG
Sbjct: 228 VYAVLYEPLNGTWQHADVDMASGWRGPAVVVXXCLYVLDQSSGTRLMIWRKDKREWMAVG 287

Query: 344 RFASKMTRPPCRLVPIGKNILIIGQGLNTTVFCTENAGE----IVTLSIPVGSTSDIEVV 177
           R +S +TRPPCR+V IGK I IIG+GL+T VF     G     +V+ SIP G   + +V+
Sbjct: 288 RLSSLLTRPPCRIVAIGKRIFIIGKGLSTVVFDIGKTGNMEGVMVSSSIP-GLNYEDDVI 346

Query: 176 SCRSVA 159
           SC+S+A
Sbjct: 347 SCKSLA 352


>ref|XP_002320790.1| predicted protein [Populus trichocarpa] gi|222861563|gb|EEE99105.1|
           predicted protein [Populus trichocarpa]
          Length = 347

 Score =  194 bits (492), Expect = 2e-47
 Identities = 93/185 (50%), Positives = 130/185 (70%), Gaps = 6/185 (3%)
 Frame = -2

Query: 704 FAIGGLGPKSSNPLSWDAYNPQTNSWKSHGDPNVLCDIEDSVVFDGKIYVRCGSSQA--S 531
           +AIGGL   S++P SWD + P+TNSW+ H +   + ++ED VV DGKIY+RC +S +  S
Sbjct: 160 YAIGGLASTSNDPYSWDIFYPRTNSWEFHSNDCAVPEVEDCVVLDGKIYIRCQASASTMS 219

Query: 530 CHVYAIAYETSSGTWEDADPDMVRGWHGPAVVVNGTLYVLDQTSGTRMIKWQKDTRQWVS 351
              YA+ YE SSG W+ AD DMV GW GPA+VV+GTLYVLDQ+SGT+++ WQKD R+WV 
Sbjct: 220 SPFYAVVYEPSSGMWQRADADMVSGWQGPAIVVDGTLYVLDQSSGTKLMMWQKDKREWVV 279

Query: 350 VGRFASKMTRPPCRLVPIGKNILIIGQGLNTTVFCTENAGEI----VTLSIPVGSTSDIE 183
           V R ++ +T+PPC+L  IGK + I+G+GL+T V  T   G +    V  SIP   T+D +
Sbjct: 280 VKRLSTLLTKPPCQLAAIGKKLFIVGRGLSTVVLDTSQTGSVEGAMVGTSIPGLITAD-K 338

Query: 182 VVSCR 168
           V++C+
Sbjct: 339 VLNCK 343


>ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score =  191 bits (486), Expect = 9e-47
 Identities = 94/186 (50%), Positives = 126/186 (67%), Gaps = 4/186 (2%)
 Frame = -2

Query: 704 FAIGGLGPKSSNPLSWDAYNPQTNSWKSHGDPNVLCDIEDSVVFDGKIYVRCGS-SQASC 528
           +AIGGL   SS+  SWD ++P T  W  H DPN+  DIEDSVV DGKIY RC   +  + 
Sbjct: 177 YAIGGLVSNSSDN-SWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAP 235

Query: 527 HVYAIAYETSSGTWEDADPDMVRGWHGPAVVVNGTLYVLDQTSGTRMIKWQKDTRQWVSV 348
           H +A+ YE SSGTW+ AD DMV GW GPAVVV GTLYVLDQ+ GTR++ W K+ R+W+ V
Sbjct: 236 HAFAVVYEPSSGTWQYADADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPV 295

Query: 347 GRFASKMTRPPCRLVPIGKNILIIGQGLNTTVFCT---ENAGEIVTLSIPVGSTSDIEVV 177
           G+ +  +TRPPC+LV +GK+I I+G+ L+T V       N G+++  S   G  SD  V+
Sbjct: 296 GKLSPLLTRPPCQLVAVGKSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVI 355

Query: 176 SCRSVA 159
           SC+ ++
Sbjct: 356 SCKCLS 361


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