BLASTX nr result
ID: Cephaelis21_contig00025892
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00025892
(1068 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containi... 383 e-104
emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera] 383 e-104
gb|ABK28160.1| unknown [Arabidopsis thaliana] 363 4e-98
gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arab... 363 4e-98
ref|NP_178378.1| pentatricopeptide repeat-containing protein [Ar... 363 4e-98
>ref|XP_002270695.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02750
[Vitis vinifera] gi|296086418|emb|CBI32007.3| unnamed
protein product [Vitis vinifera]
Length = 617
Score = 383 bits (984), Expect = e-104
Identities = 194/355 (54%), Positives = 255/355 (71%)
Frame = +3
Query: 3 QILHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRN 182
QILH Q+IK+GF DI+ ATAL D+YMKL + A KVF+E P + N ISGFSRN
Sbjct: 53 QILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRN 112
Query: 183 GLCNEVLKMFRLANLRNVKLDSVTIASWLSGCVDVKPGVQLHCWAIKMGVQIDIYVATSL 362
G E L F+ L N + +SVTIAS L C V+ Q+HC AIK+GV+ DIYVAT++
Sbjct: 113 GYFREALGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAV 172
Query: 363 LTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPS 542
+T+Y C +LV A++++ I K++V YNA++SG++QNG P V + F ++ +S E P+
Sbjct: 173 VTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPN 232
Query: 543 LVTLISVTSACADLNYLRFGRQVHGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFK 722
VTL+S+ SAC+ L Y+RFGRQ+HG + K ++ FDT VGTALVDMYSKCG W AY +F
Sbjct: 233 SVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFI 292
Query: 723 ELSSRKNLITWNSMIAGMMLNDQCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGKEA 902
ELS +NL+TWNSMIAGMMLN Q +IAVELF +LE EGL PDSATW+T+ISGFS+ G+
Sbjct: 293 ELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVV 352
Query: 903 EAFIFVRKMISVAVVPCPKCIASLLKACSALSTLRSGQEIHAYVFRTGINSNKFV 1067
EAF F KM S V+ K I SLL+ACSALS L+SG+EIH + RT I++++F+
Sbjct: 353 EAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFI 407
Score = 128 bits (321), Expect = 3e-27
Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRNGL 188
+H IK G + DI+ ATA+ +Y + A KVFD+ + YNA ISG +NG
Sbjct: 153 VHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGA 212
Query: 189 CNEVLKMFR-LANLRNVKLDSVTIASWLSGC---VDVKPGVQLHCWAIKMGVQIDIYVAT 356
+ V +F+ L +SVT+ S LS C + ++ G Q+H +K+ + D V T
Sbjct: 213 PHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGT 272
Query: 357 SLLTLYLCCRDLVSAERLY-RLIQCKSLVFYNAYMSGMVQNG------------------ 479
+L+ +Y C A ++ L ++LV +N+ ++GM+ NG
Sbjct: 273 ALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLE 332
Query: 480 ---VPW-----------QVLNAFNEMRGTSSEK--PSLVTLISVTSACADLNYLRFGRQV 611
W QV+ AF S SL ++ S+ AC+ L+ L+ G+++
Sbjct: 333 PDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEI 392
Query: 612 HGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELSSR-KNLITWNSMIAGMMLND 788
HG + + D + TAL+DMY KCG A +VF + + + WN+MI+G N
Sbjct: 393 HGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNG 452
Query: 789 QCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGK 896
+ + A E+F ++++E + P+SAT +I+S S G+
Sbjct: 453 KYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGE 488
Score = 76.3 bits (186), Expect = 1e-11
Identities = 74/331 (22%), Positives = 133/331 (40%), Gaps = 42/331 (12%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLS-------------------------------- 92
+H ++K FD TAL D+Y K
Sbjct: 255 IHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNG 314
Query: 93 RMDDATKVFDEFP----RPTIALYNAAISGFSRNGLCNEVLKMFRLANLRNVKLDSVTIA 260
+ D A ++F++ P A +N ISGFS+ G E K F V +I
Sbjct: 315 QSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSIT 374
Query: 261 SWLSGCVDV---KPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQCK 431
S L C + + G ++H I+ + D +++T+L+ +Y+ C A R++ Q K
Sbjct: 375 SLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIK 434
Query: 432 --SLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFGR 605
F+NA +SG +NG FN+M+ +P+ TL+S+ S C+ + G
Sbjct: 435 PDDPAFWNAMISGYGRNGKYQSAFEIFNQMQ-EEKVQPNSATLVSILSVCSHTGEIDRGW 493
Query: 606 QVHGFIAKGKLIFDTKVG-TALVDMYSKCGSWDSAYKVFKELSSRKNLITWNSMIAGMML 782
Q+ + + + T +VD+ + G A ++ E+ ++ + S++
Sbjct: 494 QLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEM-PEASVSVFASLLGACRH 552
Query: 783 NDQCEIAVELFVRLEDEGLIPDSATWSTIIS 875
+ + E+ +L + L P T I+S
Sbjct: 553 HSDSALGEEMAKKLSE--LEPQDPTPFVILS 581
>emb|CAN74703.1| hypothetical protein VITISV_029224 [Vitis vinifera]
Length = 677
Score = 383 bits (984), Expect = e-104
Identities = 194/355 (54%), Positives = 255/355 (71%)
Frame = +3
Query: 3 QILHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRN 182
QILH Q+IK+GF DI+ ATAL D+YMKL + A KVF+E P + N ISGFSRN
Sbjct: 113 QILHTQLIKTGFHLDIYAATALADMYMKLHLLSYALKVFEEMPHRNLPSLNVTISGFSRN 172
Query: 183 GLCNEVLKMFRLANLRNVKLDSVTIASWLSGCVDVKPGVQLHCWAIKMGVQIDIYVATSL 362
G E L F+ L N + +SVTIAS L C V+ Q+HC AIK+GV+ DIYVAT++
Sbjct: 173 GYFREALGAFKQVGLGNFRPNSVTIASVLPACASVELDGQVHCLAIKLGVESDIYVATAV 232
Query: 363 LTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPS 542
+T+Y C +LV A++++ I K++V YNA++SG++QNG P V + F ++ +S E P+
Sbjct: 233 VTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGAPHLVFDVFKDLLESSGEVPN 292
Query: 543 LVTLISVTSACADLNYLRFGRQVHGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFK 722
VTL+S+ SAC+ L Y+RFGRQ+HG + K ++ FDT VGTALVDMYSKCG W AY +F
Sbjct: 293 SVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFI 352
Query: 723 ELSSRKNLITWNSMIAGMMLNDQCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGKEA 902
ELS +NL+TWNSMIAGMMLN Q +IAVELF +LE EGL PDSATW+T+ISGFS+ G+
Sbjct: 353 ELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVV 412
Query: 903 EAFIFVRKMISVAVVPCPKCIASLLKACSALSTLRSGQEIHAYVFRTGINSNKFV 1067
EAF F KM S V+ K I SLL+ACSALS L+SG+EIH + RT I++++F+
Sbjct: 413 EAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEIHGHTIRTNIDTDEFI 467
Score = 128 bits (321), Expect = 3e-27
Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 40/336 (11%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRNGL 188
+H IK G + DI+ ATA+ +Y + A KVFD+ + YNA ISG +NG
Sbjct: 213 VHCLAIKLGVESDIYVATAVVTMYSNCGELVLAKKVFDQILDKNVVSYNAFISGLLQNGA 272
Query: 189 CNEVLKMFR-LANLRNVKLDSVTIASWLSGC---VDVKPGVQLHCWAIKMGVQIDIYVAT 356
+ V +F+ L +SVT+ S LS C + ++ G Q+H +K+ + D V T
Sbjct: 273 PHLVFDVFKDLLESSGEVPNSVTLVSILSACSKLLYIRFGRQIHGLVVKIEINFDTMVGT 332
Query: 357 SLLTLYLCCRDLVSAERLY-RLIQCKSLVFYNAYMSGMVQNG------------------ 479
+L+ +Y C A ++ L ++LV +N+ ++GM+ NG
Sbjct: 333 ALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNGQSDIAVELFEQLEPEGLE 392
Query: 480 ---VPW-----------QVLNAFNEMRGTSSEK--PSLVTLISVTSACADLNYLRFGRQV 611
W QV+ AF S SL ++ S+ AC+ L+ L+ G+++
Sbjct: 393 PDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSITSLLRACSALSALQSGKEI 452
Query: 612 HGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELSSR-KNLITWNSMIAGMMLND 788
HG + + D + TAL+DMY KCG A +VF + + + WN+MI+G N
Sbjct: 453 HGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIKPDDPAFWNAMISGYGRNG 512
Query: 789 QCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGK 896
+ + A E+F ++++E + P+SAT +I+S S G+
Sbjct: 513 KYQSAFEIFNQMQEEKVQPNSATLVSILSVCSHTGE 548
Score = 76.3 bits (186), Expect = 1e-11
Identities = 74/331 (22%), Positives = 133/331 (40%), Gaps = 42/331 (12%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLS-------------------------------- 92
+H ++K FD TAL D+Y K
Sbjct: 315 IHGLVVKIEINFDTMVGTALVDMYSKCGCWHWAYGIFIELSGSRNLVTWNSMIAGMMLNG 374
Query: 93 RMDDATKVFDEFP----RPTIALYNAAISGFSRNGLCNEVLKMFRLANLRNVKLDSVTIA 260
+ D A ++F++ P A +N ISGFS+ G E K F V +I
Sbjct: 375 QSDIAVELFEQLEPEGLEPDSATWNTMISGFSQQGQVVEAFKFFHKMQSAGVIASLKSIT 434
Query: 261 SWLSGCVDV---KPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQCK 431
S L C + + G ++H I+ + D +++T+L+ +Y+ C A R++ Q K
Sbjct: 435 SLLRACSALSALQSGKEIHGHTIRTNIDTDEFISTALIDMYMKCGHSYLARRVFCQFQIK 494
Query: 432 --SLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFGR 605
F+NA +SG +NG FN+M+ +P+ TL+S+ S C+ + G
Sbjct: 495 PDDPAFWNAMISGYGRNGKYQSAFEIFNQMQ-EEKVQPNSATLVSILSVCSHTGEIDRGW 553
Query: 606 QVHGFIAKGKLIFDTKVG-TALVDMYSKCGSWDSAYKVFKELSSRKNLITWNSMIAGMML 782
Q+ + + + T +VD+ + G A ++ E+ ++ + S++
Sbjct: 554 QLFKMMNRDYGLNPTSEHFGCMVDLLGRSGRLKEAQELIHEM-PEASVSVFASLLGACRH 612
Query: 783 NDQCEIAVELFVRLEDEGLIPDSATWSTIIS 875
+ + E+ +L + L P T I+S
Sbjct: 613 HSDSALGEEMAKKLSE--LEPQDPTPFVILS 641
>gb|ABK28160.1| unknown [Arabidopsis thaliana]
Length = 614
Score = 363 bits (932), Expect = 4e-98
Identities = 179/355 (50%), Positives = 251/355 (70%)
Frame = +3
Query: 3 QILHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRN 182
+ILH Q++K+GF D+ TATAL +YMK+ ++ DA KV DE P IA NAA+SG N
Sbjct: 51 RILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN 110
Query: 183 GLCNEVLKMFRLANLRNVKLDSVTIASWLSGCVDVKPGVQLHCWAIKMGVQIDIYVATSL 362
G C + +MF A + ++SVT+AS L GC D++ G+QLHC A+K G ++++YV TSL
Sbjct: 111 GFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSL 170
Query: 363 LTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPS 542
+++Y C + V A R++ + KS+V YNA++SG+++NGV V + FN MR SSE+P+
Sbjct: 171 VSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPN 230
Query: 543 LVTLISVTSACADLNYLRFGRQVHGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFK 722
VT ++ +ACA L L++GRQ+HG + K + F+T VGTAL+DMYSKC W SAY VF
Sbjct: 231 DVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFT 290
Query: 723 ELSSRKNLITWNSMIAGMMLNDQCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGKEA 902
EL +NLI+WNS+I+GMM+N Q E AVELF +L+ EGL PDSATW+++ISGFS+LGK
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 903 EAFIFVRKMISVAVVPCPKCIASLLKACSALSTLRSGQEIHAYVFRTGINSNKFV 1067
EAF F +M+SV +VP KC+ SLL ACS + TL++G+EIH +V + + FV
Sbjct: 351 EAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Score = 147 bits (371), Expect = 4e-33
Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 41/379 (10%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRNGL 188
LH +KSGF+ +++ T+L +Y + A ++F++ P ++ YNA ISG NG+
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 189 CNEVLKMFRLAN-LRNVKLDSVTIASWLSGC---VDVKPGVQLHCWAIKMGVQIDIYVAT 356
N V +F L + + + VT + ++ C ++++ G QLH +K Q + V T
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT 270
Query: 357 SLLTLYLCCRDLVSAERLY-RLIQCKSLVFYNAYMSGMVQNG------------------ 479
+L+ +Y CR SA ++ L ++L+ +N+ +SGM+ NG
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 480 ---VPW-----------QVLNAFNEMRGTSSEK--PSLVTLISVTSACADLNYLRFGRQV 611
W +V+ AF S PSL L S+ SAC+D+ L+ G+++
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 612 HGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELSSR-KNLITWNSMIAGMMLND 788
HG + K D V T+L+DMY KCG A ++F + K+ + WN MI+G +
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHG 450
Query: 789 QCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGK-EAEAFIFVRKMISVAVVPCPKCI 965
+CE A+E+F L +E + P AT++ ++S S G E + IF P + I
Sbjct: 451 ECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI 510
Query: 966 ASLLKACSALSTLRSGQEI 1022
++ LR +E+
Sbjct: 511 GCMIDLLGRSGRLREAKEV 529
Score = 94.4 bits (233), Expect = 4e-17
Identities = 54/178 (30%), Positives = 96/178 (53%)
Frame = +3
Query: 282 DVKPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMS 461
DV G LH +K G +D++ AT+L+++Y+ + + A ++ + + + NA +S
Sbjct: 46 DVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVS 105
Query: 462 GMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFGRQVHGFIAKGKLI 641
G+++NG F + R + S S VT+ SV C D + G Q+H K
Sbjct: 106 GLLENGFCRDAFRMFGDARVSGSGMNS-VTVASVLGGCGD---IEGGMQLHCLAMKSGFE 161
Query: 642 FDTKVGTALVDMYSKCGSWDSAYKVFKELSSRKNLITWNSMIAGMMLNDQCEIAVELF 815
+ VGT+LV MYS+CG W A ++F+++ K+++T+N+ I+G+M N + +F
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKV-PHKSVVTYNAFISGLMENGVMNLVPSVF 218
Score = 79.7 bits (195), Expect = 1e-12
Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 44/285 (15%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFP------------------- 131
LH ++K FQF+ TAL D+Y K A VF E
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 132 -----------------RPTIALYNAAISGFSRNGLCNEVLKMFRLANLRNVKLDSVT-I 257
+P A +N+ ISGFS+ G E K F L V + S+ +
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKCL 371
Query: 258 ASWLSGCVDV---KPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQ- 425
S LS C D+ K G ++H IK + DI+V TSL+ +Y+ C A R++ +
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 426 -CKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFG 602
K VF+N +SG ++G + F +R E PSL T +V SAC+ + G
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE-PSLATFTAVLSACSHCGNVEKG 490
Query: 603 RQVHGFIAK--GKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELS 731
Q+ + + G +G ++D+ + G A +V ++S
Sbjct: 491 SQIFRLMQEEYGYKPSTEHIG-CMIDLLGRSGRLREAKEVIDQMS 534
>gb|ABE65422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 613
Score = 363 bits (932), Expect = 4e-98
Identities = 179/355 (50%), Positives = 251/355 (70%)
Frame = +3
Query: 3 QILHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRN 182
+ILH Q++K+GF D+ TATAL +YMK+ ++ DA KV DE P IA NAA+SG N
Sbjct: 51 RILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN 110
Query: 183 GLCNEVLKMFRLANLRNVKLDSVTIASWLSGCVDVKPGVQLHCWAIKMGVQIDIYVATSL 362
G C + +MF A + ++SVT+AS L GC D++ G+QLHC A+K G ++++YV TSL
Sbjct: 111 GFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSL 170
Query: 363 LTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPS 542
+++Y C + V A R++ + KS+V YNA++SG+++NGV V + FN MR SSE+P+
Sbjct: 171 VSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPN 230
Query: 543 LVTLISVTSACADLNYLRFGRQVHGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFK 722
VT ++ +ACA L L++GRQ+HG + K + F+T VGTAL+DMYSKC W SAY VF
Sbjct: 231 DVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFT 290
Query: 723 ELSSRKNLITWNSMIAGMMLNDQCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGKEA 902
EL +NLI+WNS+I+GMM+N Q E AVELF +L+ EGL PDSATW+++ISGFS+LGK
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 903 EAFIFVRKMISVAVVPCPKCIASLLKACSALSTLRSGQEIHAYVFRTGINSNKFV 1067
EAF F +M+SV +VP KC+ SLL ACS + TL++G+EIH +V + + FV
Sbjct: 351 EAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Score = 146 bits (368), Expect = 1e-32
Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 41/379 (10%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRNGL 188
LH +KSGF+ +++ T+L +Y + A ++F++ P ++ YNA ISG NG+
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 189 CNEVLKMFRLAN-LRNVKLDSVTIASWLSGC---VDVKPGVQLHCWAIKMGVQIDIYVAT 356
N V +F L + + + VT + ++ C ++++ G QLH +K Q + V T
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT 270
Query: 357 SLLTLYLCCRDLVSAERLY-RLIQCKSLVFYNAYMSGMVQNG------------------ 479
+L+ +Y CR SA ++ L ++L+ +N+ +SGM+ NG
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 480 ---VPW-----------QVLNAFNEMRGTSSEK--PSLVTLISVTSACADLNYLRFGRQV 611
W +V+ AF S PSL L S+ SAC+D+ L+ G+++
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 612 HGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELSSR-KNLITWNSMIAGMMLND 788
HG + K D V T+L+DMY KCG A ++F + ++ + WN MI+G +
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPRDPVFWNVMISGYGKHG 450
Query: 789 QCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGK-EAEAFIFVRKMISVAVVPCPKCI 965
+CE A+E+F L +E + P AT++ ++S S G E + IF P + I
Sbjct: 451 ECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI 510
Query: 966 ASLLKACSALSTLRSGQEI 1022
++ LR +E+
Sbjct: 511 GCMIDLLGRSGRLREAKEV 529
Score = 94.4 bits (233), Expect = 4e-17
Identities = 54/178 (30%), Positives = 96/178 (53%)
Frame = +3
Query: 282 DVKPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMS 461
DV G LH +K G +D++ AT+L+++Y+ + + A ++ + + + NA +S
Sbjct: 46 DVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVS 105
Query: 462 GMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFGRQVHGFIAKGKLI 641
G+++NG F + R + S S VT+ SV C D + G Q+H K
Sbjct: 106 GLLENGFCRDAFRMFGDARVSGSGMNS-VTVASVLGGCGD---IEGGMQLHCLAMKSGFE 161
Query: 642 FDTKVGTALVDMYSKCGSWDSAYKVFKELSSRKNLITWNSMIAGMMLNDQCEIAVELF 815
+ VGT+LV MYS+CG W A ++F+++ K+++T+N+ I+G+M N + +F
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKV-PHKSVVTYNAFISGLMENGVMNLVPSVF 218
Score = 79.7 bits (195), Expect = 1e-12
Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 44/285 (15%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFP------------------- 131
LH ++K FQF+ TAL D+Y K A VF E
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 132 -----------------RPTIALYNAAISGFSRNGLCNEVLKMFRLANLRNVKLDSVT-I 257
+P A +N+ ISGFS+ G E K F L V + S+ +
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKCL 371
Query: 258 ASWLSGCVDV---KPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQC 428
S LS C D+ K G ++H IK + DI+V TSL+ +Y+ C A R++ +
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 429 K--SLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFG 602
K VF+N +SG ++G + F +R E PSL T +V SAC+ + G
Sbjct: 432 KPRDPVFWNVMISGYGKHGECESAIEIFELLREEKVE-PSLATFTAVLSACSHCGNVEKG 490
Query: 603 RQVHGFIAK--GKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELS 731
Q+ + + G +G ++D+ + G A +V ++S
Sbjct: 491 SQIFRLMQEEYGYKPSTEHIG-CMIDLLGRSGRLREAKEVIDQMS 534
>ref|NP_178378.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546778|sp|Q1PFA6.2|PP144_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02750 gi|2947066|gb|AAC05347.1| hypothetical protein
[Arabidopsis thaliana] gi|330250526|gb|AEC05620.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 613
Score = 363 bits (932), Expect = 4e-98
Identities = 179/355 (50%), Positives = 251/355 (70%)
Frame = +3
Query: 3 QILHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRN 182
+ILH Q++K+GF D+ TATAL +YMK+ ++ DA KV DE P IA NAA+SG N
Sbjct: 51 RILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLEN 110
Query: 183 GLCNEVLKMFRLANLRNVKLDSVTIASWLSGCVDVKPGVQLHCWAIKMGVQIDIYVATSL 362
G C + +MF A + ++SVT+AS L GC D++ G+QLHC A+K G ++++YV TSL
Sbjct: 111 GFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSL 170
Query: 363 LTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPS 542
+++Y C + V A R++ + KS+V YNA++SG+++NGV V + FN MR SSE+P+
Sbjct: 171 VSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPN 230
Query: 543 LVTLISVTSACADLNYLRFGRQVHGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFK 722
VT ++ +ACA L L++GRQ+HG + K + F+T VGTAL+DMYSKC W SAY VF
Sbjct: 231 DVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFT 290
Query: 723 ELSSRKNLITWNSMIAGMMLNDQCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGKEA 902
EL +NLI+WNS+I+GMM+N Q E AVELF +L+ EGL PDSATW+++ISGFS+LGK
Sbjct: 291 ELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVI 350
Query: 903 EAFIFVRKMISVAVVPCPKCIASLLKACSALSTLRSGQEIHAYVFRTGINSNKFV 1067
EAF F +M+SV +VP KC+ SLL ACS + TL++G+EIH +V + + FV
Sbjct: 351 EAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFV 405
Score = 147 bits (371), Expect = 4e-33
Identities = 107/379 (28%), Positives = 181/379 (47%), Gaps = 41/379 (10%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFPRPTIALYNAAISGFSRNGL 188
LH +KSGF+ +++ T+L +Y + A ++F++ P ++ YNA ISG NG+
Sbjct: 151 LHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGV 210
Query: 189 CNEVLKMFRLAN-LRNVKLDSVTIASWLSGC---VDVKPGVQLHCWAIKMGVQIDIYVAT 356
N V +F L + + + VT + ++ C ++++ G QLH +K Q + V T
Sbjct: 211 MNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGT 270
Query: 357 SLLTLYLCCRDLVSAERLY-RLIQCKSLVFYNAYMSGMVQNG------------------ 479
+L+ +Y CR SA ++ L ++L+ +N+ +SGM+ NG
Sbjct: 271 ALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLK 330
Query: 480 ---VPW-----------QVLNAFNEMRGTSSEK--PSLVTLISVTSACADLNYLRFGRQV 611
W +V+ AF S PSL L S+ SAC+D+ L+ G+++
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEI 390
Query: 612 HGFIAKGKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELSSR-KNLITWNSMIAGMMLND 788
HG + K D V T+L+DMY KCG A ++F + K+ + WN MI+G +
Sbjct: 391 HGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHG 450
Query: 789 QCEIAVELFVRLEDEGLIPDSATWSTIISGFSRLGK-EAEAFIFVRKMISVAVVPCPKCI 965
+CE A+E+F L +E + P AT++ ++S S G E + IF P + I
Sbjct: 451 ECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHI 510
Query: 966 ASLLKACSALSTLRSGQEI 1022
++ LR +E+
Sbjct: 511 GCMIDLLGRSGRLREAKEV 529
Score = 94.4 bits (233), Expect = 4e-17
Identities = 54/178 (30%), Positives = 96/178 (53%)
Frame = +3
Query: 282 DVKPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQCKSLVFYNAYMS 461
DV G LH +K G +D++ AT+L+++Y+ + + A ++ + + + NA +S
Sbjct: 46 DVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVS 105
Query: 462 GMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFGRQVHGFIAKGKLI 641
G+++NG F + R + S S VT+ SV C D + G Q+H K
Sbjct: 106 GLLENGFCRDAFRMFGDARVSGSGMNS-VTVASVLGGCGD---IEGGMQLHCLAMKSGFE 161
Query: 642 FDTKVGTALVDMYSKCGSWDSAYKVFKELSSRKNLITWNSMIAGMMLNDQCEIAVELF 815
+ VGT+LV MYS+CG W A ++F+++ K+++T+N+ I+G+M N + +F
Sbjct: 162 MEVYVGTSLVSMYSRCGEWVLAARMFEKV-PHKSVVTYNAFISGLMENGVMNLVPSVF 218
Score = 79.7 bits (195), Expect = 1e-12
Identities = 78/285 (27%), Positives = 120/285 (42%), Gaps = 44/285 (15%)
Frame = +3
Query: 9 LHVQIIKSGFQFDIHTATALTDVYMKLSRMDDATKVFDEFP------------------- 131
LH ++K FQF+ TAL D+Y K A VF E
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING 312
Query: 132 -----------------RPTIALYNAAISGFSRNGLCNEVLKMFRLANLRNVKLDSVT-I 257
+P A +N+ ISGFS+ G E K F L V + S+ +
Sbjct: 313 QHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKCL 371
Query: 258 ASWLSGCVDV---KPGVQLHCWAIKMGVQIDIYVATSLLTLYLCCRDLVSAERLYRLIQ- 425
S LS C D+ K G ++H IK + DI+V TSL+ +Y+ C A R++ +
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 426 -CKSLVFYNAYMSGMVQNGVPWQVLNAFNEMRGTSSEKPSLVTLISVTSACADLNYLRFG 602
K VF+N +SG ++G + F +R E PSL T +V SAC+ + G
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVE-PSLATFTAVLSACSHCGNVEKG 490
Query: 603 RQVHGFIAK--GKLIFDTKVGTALVDMYSKCGSWDSAYKVFKELS 731
Q+ + + G +G ++D+ + G A +V ++S
Sbjct: 491 SQIFRLMQEEYGYKPSTEHIG-CMIDLLGRSGRLREAKEVIDQMS 534