BLASTX nr result

ID: Cephaelis21_contig00025890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025890
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO42095.1| putative F-box protein [Arabidopsis thaliana]           67   5e-09
ref|NP_974940.1| actin-related protein 8 [Arabidopsis thaliana] ...    67   5e-09
ref|XP_002866129.1| hypothetical protein ARALYDRAFT_495706 [Arab...    67   5e-09
tpg|DAA00032.1| TPA_exp: actin-related protein 8A; AtARP8A [Arab...    67   5e-09
gb|AAM53249.1|AF507917_1 actin-related protein 8A [Arabidopsis t...    67   5e-09

>gb|AAO42095.1| putative F-box protein [Arabidopsis thaliana]
          Length = 387

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +3

Query: 879 VTKGGSGYCKFGWSKYISPSGRSATFLEFGNIE 977
           +  GGSGYCKFGWSKY SPSGRSATFLEFGNIE
Sbjct: 137 IIDGGSGYCKFGWSKYASPSGRSATFLEFGNIE 169


>ref|NP_974940.1| actin-related protein 8 [Arabidopsis thaliana]
           gi|332009348|gb|AED96731.1| actin-related protein 8
           [Arabidopsis thaliana]
          Length = 387

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +3

Query: 879 VTKGGSGYCKFGWSKYISPSGRSATFLEFGNIE 977
           +  GGSGYCKFGWSKY SPSGRSATFLEFGNIE
Sbjct: 137 IIDGGSGYCKFGWSKYASPSGRSATFLEFGNIE 169


>ref|XP_002866129.1| hypothetical protein ARALYDRAFT_495706 [Arabidopsis lyrata subsp.
           lyrata] gi|297311964|gb|EFH42388.1| hypothetical protein
           ARALYDRAFT_495706 [Arabidopsis lyrata subsp. lyrata]
          Length = 473

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +3

Query: 879 VTKGGSGYCKFGWSKYISPSGRSATFLEFGNIE 977
           +  GGSGYCKFGWSKY SPSGRSATFLEFGNIE
Sbjct: 139 IIDGGSGYCKFGWSKYASPSGRSATFLEFGNIE 171


>tpg|DAA00032.1| TPA_exp: actin-related protein 8A; AtARP8A [Arabidopsis thaliana]
          Length = 241

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +3

Query: 879 VTKGGSGYCKFGWSKYISPSGRSATFLEFGNIE 977
           +  GGSGYCKFGWSKY SPSGRSATFLEFGNIE
Sbjct: 137 IIDGGSGYCKFGWSKYASPSGRSATFLEFGNIE 169


>gb|AAM53249.1|AF507917_1 actin-related protein 8A [Arabidopsis thaliana]
          Length = 241

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 29/33 (87%), Positives = 30/33 (90%)
 Frame = +3

Query: 879 VTKGGSGYCKFGWSKYISPSGRSATFLEFGNIE 977
           +  GGSGYCKFGWSKY SPSGRSATFLEFGNIE
Sbjct: 137 IIDGGSGYCKFGWSKYASPSGRSATFLEFGNIE 169


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