BLASTX nr result

ID: Cephaelis21_contig00025887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025887
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264972.2| PREDICTED: GTP-binding protein At2g22870, pa...   177   2e-42
ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana] gi|2...   164   2e-38
ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata] g...   164   2e-38
ref|XP_004147081.1| PREDICTED: GTP-binding protein At2g22870-lik...   162   7e-38

>ref|XP_002264972.2| PREDICTED: GTP-binding protein At2g22870, partial [Vitis vinifera]
          Length = 213

 Score =  177 bits (450), Expect = 2e-42
 Identities = 100/172 (58%), Positives = 123/172 (71%), Gaps = 11/172 (6%)
 Frame = -3

Query: 484 LVTLRSR-FFTLPLTSLIHSPQHLSCKA-PSFFLSHKTQMVETLQLKSH---------SC 338
           ++ LR+R   +L +TSL+ S    S +A P FFL  K  +  +                 
Sbjct: 1   MLLLRNRGLLSLQVTSLLSSSSSSSSQATPPFFLCFKNTLFHSTHQNPSPKPKPKPQTQH 60

Query: 337 YISCFATKSSTPGSVSEAAQFAQTELFIPPGINLNEVTDDMMLPGSNIVLGPYAGDAKIK 158
           ++S   T+     ++S+ A+FAQT LF+PPG++  EVTDDM+LPGSNIVLGPYAG A+IK
Sbjct: 61  HVSASKTEKQ---AISDTARFAQTFLFVPPGVDPEEVTDDMVLPGSNIVLGPYAGHAQIK 117

Query: 157 EVEFVKSSNRPKDCPKDDRPEFAMLGRSNVGKSSLINALVRKKEVALTSKKP 2
           EVEFVKSS+RPKDCPKDDRPEFA+LGRSNVGKSSLINALVRKKEVALTSKKP
Sbjct: 118 EVEFVKSSSRPKDCPKDDRPEFAILGRSNVGKSSLINALVRKKEVALTSKKP 169


>ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  164 bits (416), Expect = 1e-38
 Identities = 89/162 (54%), Positives = 117/162 (72%), Gaps = 1/162 (0%)
 Frame = -3

Query: 484 LVTLRSRFFTLPLTSLIHSPQHLSCKAP-SFFLSHKTQMVETLQLKSHSCYISCFATKSS 308
           ++ LR+R FTL  +SL    QH     P +F  ++ T+         H       A+K+S
Sbjct: 1   MLLLRNRLFTL--SSLPSLTQHAKNPFPLTFSFNYSTREPPNRNPSGHVS-----ASKTS 53

Query: 307 TPGSVSEAAQFAQTELFIPPGINLNEVTDDMMLPGSNIVLGPYAGDAKIKEVEFVKSSNR 128
            P  +S+ A+F +T LF+PPG++ ++VT++++LPGSNIV+GPYAG ++IKEVEFVKSS R
Sbjct: 54  KPPPLSDVARFVRTVLFVPPGVDPDKVTEEIILPGSNIVVGPYAGHSQIKEVEFVKSSGR 113

Query: 127 PKDCPKDDRPEFAMLGRSNVGKSSLINALVRKKEVALTSKKP 2
            KDCP+DDRPEFA+LGRSNVGKSSLIN L RKKEVALTSKKP
Sbjct: 114 AKDCPRDDRPEFAILGRSNVGKSSLINVLARKKEVALTSKKP 155


>ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana]
           gi|21903474|sp|O81004.2|Y2287_ARATH RecName:
           Full=GTP-binding protein At2g22870; AltName:
           Full=Protein EMBRYO DEFECTIVE 2001
           gi|20197273|gb|AAC32434.2| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|21592880|gb|AAM64830.1| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|52354269|gb|AAU44455.1| hypothetical protein
           AT2G22870 [Arabidopsis thaliana]
           gi|55740571|gb|AAV63878.1| hypothetical protein
           At2g22870 [Arabidopsis thaliana]
           gi|330252273|gb|AEC07367.1| GTP-binding protein
           [Arabidopsis thaliana]
          Length = 300

 Score =  164 bits (415), Expect = 2e-38
 Identities = 93/169 (55%), Positives = 115/169 (68%), Gaps = 7/169 (4%)
 Frame = -3

Query: 487 MLVTLRSRFFTLPLTSLIHSPQHLSCKAPSFFLSHKTQMVETLQLKSHSCYISCFATKSS 308
           M++ LR R  T+ LT LI                 K+Q   TLQ   +  +IS     +S
Sbjct: 1   MVLLLRYRSLTINLTPLIP----------------KSQKFHTLQSFRNPNFISIPKISAS 44

Query: 307 TPG-------SVSEAAQFAQTELFIPPGINLNEVTDDMMLPGSNIVLGPYAGDAKIKEVE 149
           T         S+S+A +FA++ LFIPPG+ + E+TDDM+LPGSNIV+GP+AG ++IKEVE
Sbjct: 45  TNNPTTTTNRSISDATKFAKSVLFIPPGVEIEELTDDMVLPGSNIVIGPFAGHSQIKEVE 104

Query: 148 FVKSSNRPKDCPKDDRPEFAMLGRSNVGKSSLINALVRKKEVALTSKKP 2
           FVKSS R +DCPKDDRPE A+LGRSNVGKSSLIN LVRKKEVALTSKKP
Sbjct: 105 FVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKP 153


>ref|XP_002878640.1| EMB2001 [Arabidopsis lyrata subsp. lyrata]
           gi|297324479|gb|EFH54899.1| EMB2001 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 300

 Score =  164 bits (415), Expect = 2e-38
 Identities = 95/169 (56%), Positives = 117/169 (69%), Gaps = 7/169 (4%)
 Frame = -3

Query: 487 MLVTLRSRFFTLPLTSLIHSPQHLSCKAPSFFLSHKTQMVETLQLKSHSCYISC--FATK 314
           M++ LR R  T+ LT LI               SHK     TLQ   +  +IS    +  
Sbjct: 1   MVLLLRYRSLTINLTPLIPK-------------SHK---FHTLQSFRNPNFISIPKISAS 44

Query: 313 SSTPG-----SVSEAAQFAQTELFIPPGINLNEVTDDMMLPGSNIVLGPYAGDAKIKEVE 149
           S+ P      S+S+AA+FA++ LFIPPG+ + E+TDDM+LPGSNIV+GP+AG ++IKEVE
Sbjct: 45  SNNPATTTNRSISDAAKFAKSVLFIPPGVEIEELTDDMVLPGSNIVIGPFAGHSQIKEVE 104

Query: 148 FVKSSNRPKDCPKDDRPEFAMLGRSNVGKSSLINALVRKKEVALTSKKP 2
           FVKSS R +DCPKDDRPE A+LGRSNVGKSSLIN LVRKKEVALTSKKP
Sbjct: 105 FVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKP 153


>ref|XP_004147081.1| PREDICTED: GTP-binding protein At2g22870-like [Cucumis sativus]
          Length = 225

 Score =  162 bits (410), Expect = 7e-38
 Identities = 76/104 (73%), Positives = 95/104 (91%)
 Frame = -3

Query: 313 SSTPGSVSEAAQFAQTELFIPPGINLNEVTDDMMLPGSNIVLGPYAGDAKIKEVEFVKSS 134
           S    S+S++A+FA+T LFIPPG++ ++++D+M+LPGSNIVLGPYAGD+++KEVEFVKSS
Sbjct: 98  SPAKSSISDSARFARTVLFIPPGVDADDISDEMILPGSNIVLGPYAGDSRVKEVEFVKSS 157

Query: 133 NRPKDCPKDDRPEFAMLGRSNVGKSSLINALVRKKEVALTSKKP 2
            R +DCPKD +PEFA+LGRSNVGKSSLINALVRKKEVALTSKKP
Sbjct: 158 ARARDCPKDSKPEFAILGRSNVGKSSLINALVRKKEVALTSKKP 201


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