BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025758
         (796 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               97   5e-18
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    97   5e-18
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    94   3e-17
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    93   6e-17
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...    90   6e-16

>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 3/227 (1%)
 Frame = +1

Query: 1    QRIMTNDNRAKKGLTDSTACDQCGHPLETTLHILRDYAYTRKAWLLINPTEVISNFYGLP 180
            Q +MT + R ++ L+ S  C  C   +E+ LH+LRD       W+ + P      F+   
Sbjct: 419  QAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKS 478

Query: 181  WED*LTHILGMTVNVEDTCAVECILVNNILELVE*KKWGCIQRGTYYQQRSCSTAWSSVN 360
              + L   LG      D    E I  + I  ++    W       + +   C      V 
Sbjct: 479  LFEWLYDNLG------DRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVK 532

Query: 361  HTAIGVNQEKQK---VSMSSSTCQSEATWQKLAEGWVKLNSDGIRATESGWASAGGVIRD 531
              A+ V +       V ++    +    W     GWVK+N+DG      G ASAGGV+RD
Sbjct: 533  EWAVEVYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRD 592

Query: 532  HRGE*ICDYGILIGRCSVVQAKLWGCLDGFSLAWDRKFRNVEVELDN 672
              G     + + IGRCS  QA+LWG   G   AW++K   VE+E+D+
Sbjct: 593  CTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDS 639


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 96.7 bits (239), Expect = 5e-18
 Identities = 66/227 (29%), Positives = 99/227 (43%), Gaps = 3/227 (1%)
 Frame = +1

Query: 1   QRIMTNDNRAKKGLTDSTACDQCGHPLETTLHILRDYAYTRKAWLLINPTEVISNFYGLP 180
           Q +MT + R ++ L+ S  C  C   +E+ LH+LRD       W+ + P      F+   
Sbjct: 310 QAVMTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKS 369

Query: 181 WED*LTHILGMTVNVEDTCAVECILVNNILELVE*KKWGCIQRGTYYQQRSCSTAWSSVN 360
             + L   LG      D    E I  + I  ++    W       + +   C      V 
Sbjct: 370 LFEWLYDNLG------DRSGCEDIPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVK 423

Query: 361 HTAIGVNQEKQK---VSMSSSTCQSEATWQKLAEGWVKLNSDGIRATESGWASAGGVIRD 531
             A+ V +       V ++    +    W     GWVK+N+DG      G ASAGGV+RD
Sbjct: 424 EWAVEVYRAHSGNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVLRD 483

Query: 532 HRGE*ICDYGILIGRCSVVQAKLWGCLDGFSLAWDRKFRNVEVELDN 672
             G     + + IGRCS  QA+LWG   G   AW++K   VE+E+D+
Sbjct: 484 CTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDS 530


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 71/227 (31%), Positives = 97/227 (42%), Gaps = 3/227 (1%)
 Frame = +1

Query: 1    QRIMTNDNRAKKGLTDSTACDQCGHPLETTLHILRDYAYTRKAWLLINPTEVISNFYGLP 180
            Q IMTN  R ++ L+D+  C  C    ET +HILRD       W  I P      F+   
Sbjct: 489  QVIMTNMERQRRHLSDTGICQVCKGGDETIIHILRDCPAMYGIWTRIIPRRKRGTFFTQT 548

Query: 181  WED*LTHILGMTVNVEDTCAVECILVNNILELVE*KKWGCIQRGTYYQQRSCSTAWSSVN 360
              + +   LG +  V D C   C+            KW C     +     C      V 
Sbjct: 549  LLEWVYDNLGDSGKV-DGCPWSCVRWG--------WKWRC--GNVFGVNGKCRDMVKFVR 597

Query: 361  HTAIGVNQEKQKVSMSSST---CQSEATWQKLAEGWVKLNSDGIRATESGWASAGGVIRD 531
              A  V Q       S       +   +W K AEGW+KLN+DG      G A+AGG++R 
Sbjct: 598  DRASEVIQAHLVEGNSGKIRGRIERMVSWVKPAEGWLKLNTDGASKGNPGLATAGGILRQ 657

Query: 532  HRGE*ICDYGILIGRCSVVQAKLWGCLDGFSLAWDRKFRNVEVELDN 672
              G  I  + + IG CS   A+LW    G  +AW+RK   +EVE+D+
Sbjct: 658  QDGSWIGGFAVNIGICSAPLAELWRVYYGLYIAWERKITRLEVEVDS 704


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 93.2 bits (230), Expect = 6e-17
 Identities = 69/230 (30%), Positives = 103/230 (44%), Gaps = 6/230 (2%)
 Frame = +1

Query: 1   QRIMTNDNRAKKGLTDSTACDQCGHPLETTLHILRDYAYTRKAWLLINPTEVISNFYG-- 174
           Q I+TN  R ++ L+D+  C  C    ET LH+LRD       W  + P + I  F+   
Sbjct: 16  QVIITNVERYRRHLSDTRVCQICQGGEETILHVLRDCPAMAGIWSRLVPRDQIRQFFTAS 75

Query: 175 -LPWED*LTHILGMTVNVEDTCAVECILVNNILELVE*KKWGCIQRGTYYQQRSCSTAWS 351
            L W         +  N+ +  +   + V   + +    KW C     +     C     
Sbjct: 76  LLEW---------IYKNLRERGSWPTVFV---MAVWWGWKWRC--GNIFGGNGKCRDRVK 121

Query: 352 SVNHTAIGV---NQEKQKVSMSSSTCQSEATWQKLAEGWVKLNSDGIRATESGWASAGGV 522
            +   A  V   N   +   +  S  +   +W    +GWVKLN+DG      G+A+AGGV
Sbjct: 122 FIKDLAEEVAIANAFVKGNEVRVSRVERLVSWVSPEDGWVKLNTDGASRGNPGFATAGGV 181

Query: 523 IRDHRGE*ICDYGILIGRCSVVQAKLWGCLDGFSLAWDRKFRNVEVELDN 672
           +RDH G  I  + + IG CS   A+LWG   G  +AW R  R VE+E+D+
Sbjct: 182 LRDHNGAWIGGFAVNIGVCSAPLAELWGVYYGLFIAWGRGARRVELEVDS 231


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
 Frame = +1

Query: 1    QRIMTNDNRAKKGLTDSTACDQCGHPLETTLHILRDYAYTRKAWLLINPTEVISNFYG-- 174
            Q ++TN  R ++ + DS  C  C    E+ +H+LRD       W+ + P      F+   
Sbjct: 366  QVVLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETS 425

Query: 175  -LPWED*LTHILGMTVNVEDTCAVECILVNNILELVE*KKWGCIQRGTYYQQRSC----- 336
             L W         M  N+++    E      +  L     W       + +   C     
Sbjct: 426  LLEW---------MYGNLKERSDSERRSWPTLFALTVWWGWKWRCGYVFGEDSRCRDRVK 476

Query: 337  --STAWSSVNHTAIGVNQEKQKVSMSSSTCQSEATWQKLAEGWVKLNSDGIRATESGWAS 510
               +A + V    +  N + ++  +     +    W+K AEGWV +N+DG      G A+
Sbjct: 477  FLKSAVAEVEAAHLAANGDAREDVL----VERMIAWRKPAEGWVTMNTDGASHGNPGQAT 532

Query: 511  AGGVIRDHRGE*ICDYGILIGRCSVVQAKLWGCLDGFSLAWDRKFRNVEVELDN 672
            AGGVIRD  G  +  + + IG CS   A+LWG   G  +AW+R +R V +E+D+
Sbjct: 533  AGGVIRDEHGSWLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDS 586