BLASTX nr result

ID: Cephaelis21_contig00025640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025640
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]...    86   3e-15
ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein...    84   2e-14
emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]    84   2e-14
ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ...    82   3e-14
ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein...    81   8e-14

>ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]
           gi|222833309|gb|EEE71786.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 1056

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/54 (75%), Positives = 48/54 (88%)
 Frame = -3

Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4
           ++LGQ EKA EF++KA K+DPRD QAFLDLGELLISTD GAALDAFKTAR+L +
Sbjct: 384 VQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELLISTDTGAALDAFKTARSLLK 437


>ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis
           vinifera] gi|297738576|emb|CBI27821.3| unnamed protein
           product [Vitis vinifera]
          Length = 1091

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = -3

Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4
           ++LGQ EKA E+++KATK+DPRD QAFLDLGELLI++D GAALDAFKTAR L +
Sbjct: 387 VQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLITSDTGAALDAFKTARGLLK 440


>emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera]
          Length = 788

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 39/54 (72%), Positives = 48/54 (88%)
 Frame = -3

Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4
           ++LGQ EKA E+++KATK+DPRD QAFLDLGELLI++D GAALDAFKTAR L +
Sbjct: 387 VQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLITSDTGAALDAFKTARGLLK 440


>ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis]
           gi|223544778|gb|EEF46294.1| tpr repeat nuclear
           phosphoprotein, putative [Ricinus communis]
          Length = 1065

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/53 (73%), Positives = 47/53 (88%)
 Frame = -3

Query: 162 RLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4
           +LGQ EKA E+++KATK+DPRD QAFLDLGELLIS+D GAALDA KTAR+L +
Sbjct: 361 QLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLISSDTGAALDALKTARSLLK 413


>ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine
           max]
          Length = 1086

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 38/54 (70%), Positives = 47/54 (87%)
 Frame = -3

Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4
           ++LGQ +K  +FI+KATK+DPRD QAFL+LGELLI +D GAALDAFKTAR LF+
Sbjct: 384 VQLGQTDKGQDFIRKATKIDPRDAQAFLELGELLILSDTGAALDAFKTARTLFK 437


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