BLASTX nr result
ID: Cephaelis21_contig00025640
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00025640 (434 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa]... 86 3e-15 ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein... 84 2e-14 emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera] 84 2e-14 ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative ... 82 3e-14 ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein... 81 8e-14 >ref|XP_002326116.1| PAF1 complex component [Populus trichocarpa] gi|222833309|gb|EEE71786.1| PAF1 complex component [Populus trichocarpa] Length = 1056 Score = 85.9 bits (211), Expect = 3e-15 Identities = 41/54 (75%), Positives = 48/54 (88%) Frame = -3 Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4 ++LGQ EKA EF++KA K+DPRD QAFLDLGELLISTD GAALDAFKTAR+L + Sbjct: 384 VQLGQTEKAQEFLRKAAKIDPRDAQAFLDLGELLISTDTGAALDAFKTARSLLK 437 >ref|XP_002279485.2| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Vitis vinifera] gi|297738576|emb|CBI27821.3| unnamed protein product [Vitis vinifera] Length = 1091 Score = 83.6 bits (205), Expect = 2e-14 Identities = 39/54 (72%), Positives = 48/54 (88%) Frame = -3 Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4 ++LGQ EKA E+++KATK+DPRD QAFLDLGELLI++D GAALDAFKTAR L + Sbjct: 387 VQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLITSDTGAALDAFKTARGLLK 440 >emb|CAN67377.1| hypothetical protein VITISV_017914 [Vitis vinifera] Length = 788 Score = 83.6 bits (205), Expect = 2e-14 Identities = 39/54 (72%), Positives = 48/54 (88%) Frame = -3 Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4 ++LGQ EKA E+++KATK+DPRD QAFLDLGELLI++D GAALDAFKTAR L + Sbjct: 387 VQLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLITSDTGAALDAFKTARGLLK 440 >ref|XP_002516292.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis] gi|223544778|gb|EEF46294.1| tpr repeat nuclear phosphoprotein, putative [Ricinus communis] Length = 1065 Score = 82.4 bits (202), Expect = 3e-14 Identities = 39/53 (73%), Positives = 47/53 (88%) Frame = -3 Query: 162 RLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4 +LGQ EKA E+++KATK+DPRD QAFLDLGELLIS+D GAALDA KTAR+L + Sbjct: 361 QLGQTEKAQEYLRKATKIDPRDAQAFLDLGELLISSDTGAALDALKTARSLLK 413 >ref|XP_003533781.1| PREDICTED: RNA polymerase-associated protein CTR9 homolog [Glycine max] Length = 1086 Score = 81.3 bits (199), Expect = 8e-14 Identities = 38/54 (70%), Positives = 47/54 (87%) Frame = -3 Query: 165 LRLGQAEKAYEFIKKATKVDPRDPQAFLDLGELLISTDAGAALDAFKTARNLFQ 4 ++LGQ +K +FI+KATK+DPRD QAFL+LGELLI +D GAALDAFKTAR LF+ Sbjct: 384 VQLGQTDKGQDFIRKATKIDPRDAQAFLELGELLILSDTGAALDAFKTARTLFK 437