BLASTX nr result

ID: Cephaelis21_contig00025568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025568
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138155.1| PREDICTED: ABC transporter A family member 2...    64   2e-16
emb|CAB41856.1| ABC-type transport-like protein [Arabidopsis tha...    62   4e-16
ref|NP_190357.2| ABC transporter A family member 2 [Arabidopsis ...    62   4e-16
ref|XP_002877573.1| hypothetical protein ARALYDRAFT_485135 [Arab...    62   4e-16
ref|XP_002866451.1| predicted protein [Arabidopsis lyrata subsp....    60   9e-15

>ref|XP_004138155.1| PREDICTED: ABC transporter A family member 2-like [Cucumis sativus]
           gi|449477295|ref|XP_004154984.1| PREDICTED: ABC
           transporter A family member 2-like [Cucumis sativus]
          Length = 976

 Score = 63.5 bits (153), Expect(2) = 2e-16
 Identities = 30/44 (68%), Positives = 34/44 (77%)
 Frame = +2

Query: 197 IVTVLFGMMFQFDFFIHNSFGVVFLMFFLFQFNMVNFLYT*RSF 328
           I TVLFGMMFQFDFF  N+F VVFL+FFLFQ NMV F +   +F
Sbjct: 286 IFTVLFGMMFQFDFFSKNNFAVVFLVFFLFQLNMVGFAFMLSAF 329



 Score = 46.6 bits (109), Expect(2) = 2e-16
 Identities = 19/25 (76%), Positives = 22/25 (88%)
 Frame = +3

Query: 111 RAMTMMGVYDAAYWLSWVTLEGIIT 185
           +AMTMMG+YD AYWLSW+T EGI T
Sbjct: 257 QAMTMMGLYDTAYWLSWLTWEGITT 281


>emb|CAB41856.1| ABC-type transport-like protein [Arabidopsis thaliana]
          Length = 1011

 Score = 62.0 bits (149), Expect(2) = 4e-16
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 197 IVTVLFGMMFQFDFFIHNSFGVVFLMFFLFQFNMVNFLYT*RSF 328
           ++TVLFGMMFQFDFF+ NSF VVFL+F LFQFN++   +   +F
Sbjct: 286 LLTVLFGMMFQFDFFLKNSFPVVFLLFMLFQFNLIGLAFMLSAF 329



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 111 RAMTMMGVYDAAYWLSWVTLEGIIT 185
           +AMTMMGV+D AYWLSW+T EGI+T
Sbjct: 257 QAMTMMGVFDTAYWLSWLTWEGILT 281


>ref|NP_190357.2| ABC transporter A family member 2 [Arabidopsis thaliana]
           gi|75327852|sp|Q84K47.1|AB2A_ARATH RecName: Full=ABC
           transporter A family member 2; Short=ABC transporter
           ABCA.2; Short=AtABCA2; AltName: Full=ABC2 homolog 1
           gi|28393591|gb|AAO42215.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|28973103|gb|AAO63876.1| putative ABC transporter
           protein [Arabidopsis thaliana]
           gi|332644802|gb|AEE78323.1| ABC transporter A family
           member 2 [Arabidopsis thaliana]
          Length = 983

 Score = 62.0 bits (149), Expect(2) = 4e-16
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 197 IVTVLFGMMFQFDFFIHNSFGVVFLMFFLFQFNMVNFLYT*RSF 328
           ++TVLFGMMFQFDFF+ NSF VVFL+F LFQFN++   +   +F
Sbjct: 286 LLTVLFGMMFQFDFFLKNSFPVVFLLFMLFQFNLIGLAFMLSAF 329



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 111 RAMTMMGVYDAAYWLSWVTLEGIIT 185
           +AMTMMGV+D AYWLSW+T EGI+T
Sbjct: 257 QAMTMMGVFDTAYWLSWLTWEGILT 281


>ref|XP_002877573.1| hypothetical protein ARALYDRAFT_485135 [Arabidopsis lyrata subsp.
           lyrata] gi|297323411|gb|EFH53832.1| hypothetical protein
           ARALYDRAFT_485135 [Arabidopsis lyrata subsp. lyrata]
          Length = 982

 Score = 62.0 bits (149), Expect(2) = 4e-16
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = +2

Query: 197 IVTVLFGMMFQFDFFIHNSFGVVFLMFFLFQFNMVNFLYT*RSF 328
           ++TVLFGMMFQFDFF+ NSF VVFL+F LFQFN++   +   +F
Sbjct: 286 LLTVLFGMMFQFDFFLKNSFPVVFLLFMLFQFNLIGLAFMLSAF 329



 Score = 47.4 bits (111), Expect(2) = 4e-16
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 111 RAMTMMGVYDAAYWLSWVTLEGIIT 185
           +AMTMMGV+D AYWLSW+T EGI+T
Sbjct: 257 QAMTMMGVFDTAYWLSWLTWEGILT 281


>ref|XP_002866451.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297312286|gb|EFH42710.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 954

 Score = 60.5 bits (145), Expect(2) = 9e-15
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = +2

Query: 206 VLFGMMFQFDFFIHNSFGVVFLMFFLFQFNMVNFLY 313
           VLFGMMFQFDFF+ NSF +VFL+FFLFQFNM+   +
Sbjct: 292 VLFGMMFQFDFFLKNSFVLVFLLFFLFQFNMIGLAF 327



 Score = 44.3 bits (103), Expect(2) = 9e-15
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +3

Query: 114 AMTMMGVYDAAYWLSWVTLEGIIT 185
           AMT MGVYD+AYWLSW+  EGI+T
Sbjct: 261 AMTTMGVYDSAYWLSWLLWEGILT 284


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