BLASTX nr result

ID: Cephaelis21_contig00025525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00025525
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...   169   4e-40
ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|2...   164   2e-38
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...   161   9e-38
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...   158   8e-37
dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]                155   9e-36

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic [Vitis vinifera]
           gi|297741486|emb|CBI32618.3| unnamed protein product
           [Vitis vinifera]
          Length = 842

 Score =  169 bits (428), Expect = 4e-40
 Identities = 80/103 (77%), Positives = 92/103 (89%)
 Frame = +3

Query: 93  YNILMKACGTDYHHAKALMDEMKTEGLSPNHISWSILMDICGGSGNVKGVLQILRSMHWA 272
           YNILMKACGTDY+ AKALMDEMKT GLSPNHISWSIL+DICGG+GN+ G ++IL++M  A
Sbjct: 504 YNILMKACGTDYYRAKALMDEMKTAGLSPNHISWSILIDICGGTGNIVGAVRILKTMREA 563

Query: 273 DIQPDVVAYTTAIKVCVEHKNLKVAFSLLEEMKRYQIKPNLVS 401
            I+PDVVAYTTAIK CVE KNLK+AFSL  EMKRYQI+PNLV+
Sbjct: 564 GIKPDVVAYTTAIKYCVESKNLKIAFSLFAEMKRYQIQPNLVT 606


>ref|XP_002326162.1| predicted protein [Populus trichocarpa] gi|222833355|gb|EEE71832.1|
           predicted protein [Populus trichocarpa]
          Length = 828

 Score =  164 bits (414), Expect = 2e-38
 Identities = 78/103 (75%), Positives = 90/103 (87%)
 Frame = +3

Query: 93  YNILMKACGTDYHHAKALMDEMKTEGLSPNHISWSILMDICGGSGNVKGVLQILRSMHWA 272
           Y++LMKACG+DYH AKALMDEMKT G+SPNHISWSIL+DICG SGNV G +QIL++M  A
Sbjct: 515 YHMLMKACGSDYHRAKALMDEMKTVGISPNHISWSILIDICGVSGNVSGAVQILKNMRMA 574

Query: 273 DIQPDVVAYTTAIKVCVEHKNLKVAFSLLEEMKRYQIKPNLVS 401
            ++PDVVAYTTAIKVCVE KNLK+AFSL  EMKR QI PNLV+
Sbjct: 575 GVEPDVVAYTTAIKVCVETKNLKLAFSLFAEMKRCQINPNLVT 617


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score =  161 bits (408), Expect = 9e-38
 Identities = 76/103 (73%), Positives = 90/103 (87%)
 Frame = +3

Query: 93  YNILMKACGTDYHHAKALMDEMKTEGLSPNHISWSILMDICGGSGNVKGVLQILRSMHWA 272
           YN LMKACG+DY+ AKALMDEM+  GLSPNHISWSIL+DICG SGN++G +QIL++M  A
Sbjct: 451 YNTLMKACGSDYNRAKALMDEMQAVGLSPNHISWSILIDICGSSGNMEGAIQILKNMRMA 510

Query: 273 DIQPDVVAYTTAIKVCVEHKNLKVAFSLLEEMKRYQIKPNLVS 401
            I+PDV+AYTTAIKV VE KNLK+AFSL  EMKRYQ+KPNLV+
Sbjct: 511 GIEPDVIAYTTAIKVSVESKNLKMAFSLFAEMKRYQLKPNLVT 553


>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score =  158 bits (400), Expect = 8e-37
 Identities = 75/103 (72%), Positives = 90/103 (87%)
 Frame = +3

Query: 93  YNILMKACGTDYHHAKALMDEMKTEGLSPNHISWSILMDICGGSGNVKGVLQILRSMHWA 272
           YNILMKACGTDY+HAKALM+EMK+ GL+PNHISWSIL+DICG S +V+  +QIL +M  A
Sbjct: 521 YNILMKACGTDYYHAKALMEEMKSVGLTPNHISWSILVDICGRSHDVESAVQILTTMRMA 580

Query: 273 DIQPDVVAYTTAIKVCVEHKNLKVAFSLLEEMKRYQIKPNLVS 401
            + PDVVAYTTAIKVCVE KN K+AFSL EEMKR++I+PNLV+
Sbjct: 581 GVDPDVVAYTTAIKVCVEGKNWKLAFSLFEEMKRFEIQPNLVT 623


>dbj|BAC42187.2| unknown protein [Arabidopsis thaliana]
          Length = 852

 Score =  155 bits (391), Expect = 9e-36
 Identities = 72/103 (69%), Positives = 89/103 (86%)
 Frame = +3

Query: 93  YNILMKACGTDYHHAKALMDEMKTEGLSPNHISWSILMDICGGSGNVKGVLQILRSMHWA 272
           YNIL+KACGTDY+  K LMDEMK+ GLSPN I+WS L+D+CGGSG+V+G ++ILR+MH A
Sbjct: 529 YNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSA 588

Query: 273 DIQPDVVAYTTAIKVCVEHKNLKVAFSLLEEMKRYQIKPNLVS 401
             +PDVVAYTTAIK+C E+K LK+AFSL EEM+RYQIKPN V+
Sbjct: 589 GTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVT 631


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