BLASTX nr result

ID: Cephaelis21_contig00024988 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024988
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAT08672.1| ribosomal protein L19 [Hyacinthus orientalis]          173   7e-41
ref|XP_002883026.1| 60S ribosomal protein L19 [Arabidopsis lyrat...   172   1e-40
gb|ACU16718.1| unknown [Glycine max]                                  172   1e-40
ref|NP_188300.1| 60S ribosomal protein L19-2 [Arabidopsis thalia...   172   1e-40
gb|ABC01909.1| 60S ribosomal protein L19-like protein [Solanum t...   172   2e-40

>gb|AAT08672.1| ribosomal protein L19 [Hyacinthus orientalis]
          Length = 203

 Score =  173 bits (438), Expect = 7e-41
 Identities = 86/123 (69%), Positives = 97/123 (78%)
 Frame = -3

Query: 459 IRKLIKDGLIIKRPGIVHSRSRAREVMEAERKGRHSGYGKRKGTREARLPTKVLWMXXXX 280
           IRKL+KDG II++P  +HSRSRAR  MEA+RKGRHSGYGKRKGTREARLPTKVLWM    
Sbjct: 41  IRKLVKDGFIIRKPQKIHSRSRARRAMEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMR 100

Query: 279 XXXXXXXXXRDSNKIDRHIYHDMYMKVKGNVFKNKRVLMESIHKLKTKKIRETLIPMQFK 100
                    R+S KID+H+YHDMYMKVKGNVFKNKRVLMESIHK K +K RE  I  QF+
Sbjct: 101 VLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTISDQFE 160

Query: 99  ARR 91
           A+R
Sbjct: 161 AKR 163


>ref|XP_002883026.1| 60S ribosomal protein L19 [Arabidopsis lyrata subsp. lyrata]
           gi|297328866|gb|EFH59285.1| 60S ribosomal protein L19
           [Arabidopsis lyrata subsp. lyrata]
          Length = 209

 Score =  172 bits (437), Expect = 1e-40
 Identities = 86/135 (63%), Positives = 102/135 (75%)
 Frame = -3

Query: 459 IRKLIKDGLIIKRPGIVHSRSRAREVMEAERKGRHSGYGKRKGTREARLPTKVLWMXXXX 280
           IRKL+KDG II++P  +HSRSRAR + EA+RKGRHSGYGKRKGTREARLPTK+LWM    
Sbjct: 41  IRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMR 100

Query: 279 XXXXXXXXXRDSNKIDRHIYHDMYMKVKGNVFKNKRVLMESIHKLKTKKIRETLIPMQFK 100
                    R+S KIDRH+YHDMYMKVKGNVFKNKRVLMESIHK+K +K RE  +  QF+
Sbjct: 101 VLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLSDQFE 160

Query: 99  ARRDQRNTVSVRIFS 55
           A+R +      R F+
Sbjct: 161 AKRIKNKASRERKFA 175


>gb|ACU16718.1| unknown [Glycine max]
          Length = 206

 Score =  172 bits (437), Expect = 1e-40
 Identities = 83/123 (67%), Positives = 98/123 (79%)
 Frame = -3

Query: 459 IRKLIKDGLIIKRPGIVHSRSRAREVMEAERKGRHSGYGKRKGTREARLPTKVLWMXXXX 280
           +RKL+KDG II++P  +HSRSRAR + EA+RKGRHSGYGKRKGTREARLPTK+LWM    
Sbjct: 41  VRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMR 100

Query: 279 XXXXXXXXXRDSNKIDRHIYHDMYMKVKGNVFKNKRVLMESIHKLKTKKIRETLIPMQFK 100
                    R+S KID+H+YHDMYMKVKGNVFKNKRVLMESIHK K +K RE  +P QF+
Sbjct: 101 VLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKALPDQFE 160

Query: 99  ARR 91
           A+R
Sbjct: 161 AKR 163


>ref|NP_188300.1| 60S ribosomal protein L19-2 [Arabidopsis thaliana]
           gi|17865565|sp|Q9LUQ6.1|RL192_ARATH RecName: Full=60S
           ribosomal protein L19-2 gi|11994633|dbj|BAB02770.1| 60S
           ribosome protein L19-like [Arabidopsis thaliana]
           gi|15010618|gb|AAK73968.1| AT3g16780/MGL6_23
           [Arabidopsis thaliana] gi|19699260|gb|AAL90996.1|
           AT3g16780/MGL6_23 [Arabidopsis thaliana]
           gi|332642343|gb|AEE75864.1| 60S ribosomal protein L19-2
           [Arabidopsis thaliana]
          Length = 209

 Score =  172 bits (437), Expect = 1e-40
 Identities = 86/135 (63%), Positives = 102/135 (75%)
 Frame = -3

Query: 459 IRKLIKDGLIIKRPGIVHSRSRAREVMEAERKGRHSGYGKRKGTREARLPTKVLWMXXXX 280
           IRKL+KDG II++P  +HSRSRAR + EA+RKGRHSGYGKRKGTREARLPTK+LWM    
Sbjct: 41  IRKLVKDGFIIRKPTKIHSRSRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMR 100

Query: 279 XXXXXXXXXRDSNKIDRHIYHDMYMKVKGNVFKNKRVLMESIHKLKTKKIRETLIPMQFK 100
                    R+S KIDRH+YHDMYMKVKGNVFKNKRVLMESIHK+K +K RE  +  QF+
Sbjct: 101 VLRRFLSKYRESKKIDRHMYHDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFE 160

Query: 99  ARRDQRNTVSVRIFS 55
           A+R +      R F+
Sbjct: 161 AKRIKNKASRERKFA 175


>gb|ABC01909.1| 60S ribosomal protein L19-like protein [Solanum tuberosum]
          Length = 209

 Score =  172 bits (435), Expect = 2e-40
 Identities = 86/135 (63%), Positives = 101/135 (74%)
 Frame = -3

Query: 459 IRKLIKDGLIIKRPGIVHSRSRAREVMEAERKGRHSGYGKRKGTREARLPTKVLWMXXXX 280
           IRKL+KDG II++P  +HSRSRAR + EA+RKGRHSGYGKRKGTREARLPTKVLWM    
Sbjct: 41  IRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRLR 100

Query: 279 XXXXXXXXXRDSNKIDRHIYHDMYMKVKGNVFKNKRVLMESIHKLKTKKIRETLIPMQFK 100
                    R+S KID+H+YHDMYMKVKGNVFKNKRVLME+IHK K +K RE  +  QF+
Sbjct: 101 VLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMENIHKTKAEKAREKTLSDQFE 160

Query: 99  ARRDQRNTVSVRIFS 55
           ARR +      R F+
Sbjct: 161 ARRAKNKASRERKFA 175


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