BLASTX nr result

ID: Cephaelis21_contig00024983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024983
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]                   129   2e-28
pir||S49904 cyclin - common tobacco                                   124   9e-27
emb|CAB81558.1| cyclin B1 [Nicotiana tabacum]                         124   1e-26
emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]                    123   1e-26
ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>dbj|BAA20411.1| B-type cyclin [Catharanthus roseus]
          Length = 436

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/80 (76%), Positives = 72/80 (90%)
 Frame = -3

Query: 532 SMIAASAVYAARCTLNKNPLWDETLKFHTGFSEKQLLECAKLLVSLHAMASDHKLKAIYK 353
           SMIAASAVYAARCT NK P WD+TLK HTGFSE QL++CAK+LV+LHAMA+D+KLK I++
Sbjct: 356 SMIAASAVYAARCTFNKTPSWDDTLKLHTGFSEYQLIDCAKVLVNLHAMAADNKLKVIFR 415

Query: 352 KYSSTERGAVALFPPAKNLL 293
           KYSS ERG+VAL PPAK+LL
Sbjct: 416 KYSSLERGSVALLPPAKSLL 435


>pir||S49904 cyclin - common tobacco
          Length = 449

 Score =  124 bits (311), Expect = 9e-27
 Identities = 65/115 (56%), Positives = 82/115 (71%), Gaps = 7/115 (6%)
 Frame = -3

Query: 532 SMIAASAVYAARCTLNKNPLWDETLKFHTGFSEKQLLECAKLLVSLHAMASDHKLKAIYK 353
           SM+AAS+VYAAR TLNK PLW +TL+ HTG+SE QL+ECAK+LVS H  A++ KLKAIY+
Sbjct: 334 SMLAASSVYAARSTLNKTPLWTQTLQHHTGYSEDQLMECAKILVSYHLDAAESKLKAIYR 393

Query: 352 KYSSTERGAVALFPPAKNLLPSTA*FLMVLAFSLTRFVV-------DHCCILFSM 209
           K+SS +RGAVA FPPA+NLLP+T      L      F+V        +CC L S+
Sbjct: 394 KFSSPDRGAVAFFPPARNLLPTTTTDAASLVLEEFYFLVWEAFLGSFYCCDLSSL 448


>emb|CAB81558.1| cyclin B1 [Nicotiana tabacum]
          Length = 425

 Score =  124 bits (310), Expect = 1e-26
 Identities = 58/83 (69%), Positives = 72/83 (86%)
 Frame = -3

Query: 532 SMIAASAVYAARCTLNKNPLWDETLKFHTGFSEKQLLECAKLLVSLHAMASDHKLKAIYK 353
           SM+AAS+VYAAR TLNK PLW +TL+ HTG+SE QL+ECAK+LVS H  A++ KLKAIY+
Sbjct: 334 SMLAASSVYAARSTLNKTPLWTQTLQHHTGYSEDQLMECAKILVSYHLDAAESKLKAIYR 393

Query: 352 KYSSTERGAVALFPPAKNLLPST 284
           K+SS +RGAVA FPPA+NLLP+T
Sbjct: 394 KFSSPDRGAVAFFPPARNLLPTT 416


>emb|CAA99990.1| mitotic cyclin [Sesbania rostrata]
          Length = 445

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/80 (70%), Positives = 71/80 (88%)
 Frame = -3

Query: 532 SMIAASAVYAARCTLNKNPLWDETLKFHTGFSEKQLLECAKLLVSLHAMASDHKLKAIYK 353
           SM+AASAVYAARCTLNK+P+W+ETLK HTG+SE+QL++CA+LLVSLH+   + KLK +Y+
Sbjct: 360 SMVAASAVYAARCTLNKSPVWNETLKQHTGYSEEQLMDCARLLVSLHSTVGNGKLKVVYR 419

Query: 352 KYSSTERGAVALFPPAKNLL 293
           KYS  ERG+VA+ PPAKNLL
Sbjct: 420 KYSDPERGSVAVLPPAKNLL 439


>ref|XP_002308872.1| predicted protein [Populus trichocarpa] gi|222854848|gb|EEE92395.1|
           predicted protein [Populus trichocarpa]
          Length = 457

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/81 (70%), Positives = 66/81 (81%)
 Frame = -3

Query: 532 SMIAASAVYAARCTLNKNPLWDETLKFHTGFSEKQLLECAKLLVSLHAMASDHKLKAIYK 353
           SM+AASAVY ARCTLNK P W +TLK HTGFSE QL +CA LLV  H+ AS+H+L+ +Y+
Sbjct: 372 SMVAASAVYVARCTLNKTPFWTDTLKKHTGFSEPQLKDCAGLLVYFHSKASEHRLQTVYR 431

Query: 352 KYSSTERGAVALFPPAKNLLP 290
           KYS  ERGAVAL PPAKNLLP
Sbjct: 432 KYSKPERGAVALLPPAKNLLP 452


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