BLASTX nr result

ID: Cephaelis21_contig00024916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024916
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520712.1| histone h2a, putative [Ricinus communis] gi|...   183   4e-44
ref|XP_003554230.1| PREDICTED: histone H2AX-like [Glycine max]        177   3e-42
ref|XP_002271506.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...   176   6e-42
ref|XP_003521229.1| PREDICTED: histone H2AX-like [Glycine max]        173   5e-41
sp|P35063.1|H2AX_PICAB RecName: Full=Histone H2AX gi|297871|emb|...   171   2e-40

>ref|XP_002520712.1| histone h2a, putative [Ricinus communis]
           gi|223540097|gb|EEF41674.1| histone h2a, putative
           [Ricinus communis]
          Length = 141

 Score =  183 bits (465), Expect = 4e-44
 Identities = 95/122 (77%), Positives = 102/122 (83%)
 Frame = -2

Query: 690 SVSRSEKAGLQFPVGRIARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDN 511
           +VSRS KAGLQFPVGR+ARFLKKGRYAQRVGSGSP                 AGNAARDN
Sbjct: 20  AVSRSSKAGLQFPVGRVARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDN 79

Query: 510 KRNRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQNLLPKKSSKDGKPEVGSLSQ 331
           K+NRIIPRHIQLAVRNDEELSKLLGAVTIA+GGVLPNIHQNLLPKKS+K GK E+GS+SQ
Sbjct: 80  KKNRIIPRHIQLAVRNDEELSKLLGAVTIASGGVLPNIHQNLLPKKSAKGGKGEIGSVSQ 139

Query: 330 EF 325
           EF
Sbjct: 140 EF 141


>ref|XP_003554230.1| PREDICTED: histone H2AX-like [Glycine max]
          Length = 144

 Score =  177 bits (449), Expect = 3e-42
 Identities = 90/122 (73%), Positives = 99/122 (81%)
 Frame = -2

Query: 690 SVSRSEKAGLQFPVGRIARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDN 511
           SVSRS KAGLQFPVGR+AR+LK GRYAQRVGSGSP                 AGNAARDN
Sbjct: 23  SVSRSSKAGLQFPVGRVARYLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDN 82

Query: 510 KRNRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQNLLPKKSSKDGKPEVGSLSQ 331
           K+ RI+PRHIQLAVRNDEELSKL+G+VTIANGGVLPNIHQNLLPKK++  GKPE+GS SQ
Sbjct: 83  KKTRIVPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKAAGKGKPEIGSASQ 142

Query: 330 EF 325
           EF
Sbjct: 143 EF 144


>ref|XP_002271506.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147835834|emb|CAN75194.1| hypothetical protein
           VITISV_016149 [Vitis vinifera]
           gi|147855437|emb|CAN79608.1| hypothetical protein
           VITISV_009851 [Vitis vinifera]
           gi|296086659|emb|CBI32294.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  176 bits (446), Expect = 6e-42
 Identities = 94/122 (77%), Positives = 99/122 (81%)
 Frame = -2

Query: 690 SVSRSEKAGLQFPVGRIARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDN 511
           SVSRS+KAGLQFPVGRIARFLKKGRYAQRVGSGSP                 AGNAARDN
Sbjct: 18  SVSRSQKAGLQFPVGRIARFLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDN 77

Query: 510 KRNRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQNLLPKKSSKDGKPEVGSLSQ 331
           K+NRIIPRHIQLAVRNDEEL KLLG VTIA+GGVLPNIHQNLLPKK+ K GK E+GS SQ
Sbjct: 78  KKNRIIPRHIQLAVRNDEELGKLLGGVTIASGGVLPNIHQNLLPKKTGK-GKGEIGSASQ 136

Query: 330 EF 325
           EF
Sbjct: 137 EF 138


>ref|XP_003521229.1| PREDICTED: histone H2AX-like [Glycine max]
          Length = 144

 Score =  173 bits (438), Expect = 5e-41
 Identities = 89/122 (72%), Positives = 97/122 (79%)
 Frame = -2

Query: 690 SVSRSEKAGLQFPVGRIARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDN 511
           SVSRS KAGLQFPVGR+AR+LK GRYAQRVGSGSP                 AGNAARDN
Sbjct: 23  SVSRSSKAGLQFPVGRVARYLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDN 82

Query: 510 KRNRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQNLLPKKSSKDGKPEVGSLSQ 331
           K+ RI+PRHIQLAVRNDEELSKL+G+VTIANGGVLPNIHQNLLPKK +  GK E+GS SQ
Sbjct: 83  KKTRIVPRHIQLAVRNDEELSKLMGSVTIANGGVLPNIHQNLLPKKVAGKGKTEIGSASQ 142

Query: 330 EF 325
           EF
Sbjct: 143 EF 144


>sp|P35063.1|H2AX_PICAB RecName: Full=Histone H2AX gi|297871|emb|CAA48030.1| histone H2A
           [Picea abies] gi|30024112|emb|CAC84681.1| putative
           histone H2B [Pinus pinaster] gi|116779069|gb|ABK21126.1|
           unknown [Picea sitchensis]
          Length = 138

 Score =  171 bits (434), Expect = 2e-40
 Identities = 91/122 (74%), Positives = 99/122 (81%)
 Frame = -2

Query: 690 SVSRSEKAGLQFPVGRIARFLKKGRYAQRVGSGSPXXXXXXXXXXXXXXXXXAGNAARDN 511
           SVSRS+KAGLQFPVGRIARFLK G+YA+RVG+G+P                 AGNAARDN
Sbjct: 18  SVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDN 77

Query: 510 KRNRIIPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQNLLPKKSSKDGKPEVGSLSQ 331
           K+NRI+PRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQ LLPKKS KD K E+GS SQ
Sbjct: 78  KKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQVLLPKKSGKD-KGEIGSASQ 136

Query: 330 EF 325
           EF
Sbjct: 137 EF 138


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