BLASTX nr result
ID: Cephaelis21_contig00024908
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00024908
(622 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containi... 135 2e-39
emb|CBI36552.3| unnamed protein product [Vitis vinifera] 135 2e-39
ref|XP_003610281.1| Pentatricopeptide repeat-containing protein ... 133 1e-38
ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containi... 132 1e-35
ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 130 5e-35
>ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 135 bits (341), Expect(2) = 2e-39
Identities = 67/109 (61%), Positives = 83/109 (76%)
Frame = -3
Query: 329 PDKFLYNELIRGFSQNNSPFDSIAVYSHLRGKTDLKPDNFTYAFVVSAVSSSGLQKVGIL 150
PD FLYN LIR FS NNSP ++++Y+HLR T L+PDNFTYAFV+S SS GL G+L
Sbjct: 71 PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGL---GLL 127
Query: 149 LHGHVIVSGFGSDLFVGSALVDMYMNFSKMRYACRVFEGIPKRDGVLWN 3
LH H IV+GFGSDLFVGSA+V Y FS++ A +VF+G+ +RD VLWN
Sbjct: 128 LHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWN 176
Score = 52.4 bits (124), Expect(2) = 2e-39
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -1
Query: 517 THAQIILNGLSKDLATLTKLTHKLFDFKAASEAKLLLTSL 398
THAQIILNGL DL T+TKLTHKL KA +A LL +++
Sbjct: 29 THAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI 68
Score = 61.6 bits (148), Expect = 1e-07
Identities = 30/104 (28%), Positives = 60/104 (57%)
Frame = -3
Query: 314 YNELIRGFSQNNSPFDSIAVYSHLRGKTDLKPDNFTYAFVVSAVSSSGLQKVGILLHGHV 135
+N +I G++QN +I+++ ++ K +++P+ T ++SA + G +G +H +
Sbjct: 377 WNAMISGYAQNGLTEKAISLFQEMQ-KCEVRPNPVTVTSILSACAQLGALSLGKWVHDLI 435
Query: 134 IVSGFGSDLFVGSALVDMYMNFSKMRYACRVFEGIPKRDGVLWN 3
F S++FV +AL+DMY + A R+F +P+++ V WN
Sbjct: 436 NRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWN 479
>emb|CBI36552.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 135 bits (341), Expect(2) = 2e-39
Identities = 67/109 (61%), Positives = 83/109 (76%)
Frame = -3
Query: 329 PDKFLYNELIRGFSQNNSPFDSIAVYSHLRGKTDLKPDNFTYAFVVSAVSSSGLQKVGIL 150
PD FLYN LIR FS NNSP ++++Y+HLR T L+PDNFTYAFV+S SS GL G+L
Sbjct: 71 PDLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGL---GLL 127
Query: 149 LHGHVIVSGFGSDLFVGSALVDMYMNFSKMRYACRVFEGIPKRDGVLWN 3
LH H IV+GFGSDLFVGSA+V Y FS++ A +VF+G+ +RD VLWN
Sbjct: 128 LHAHSIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWN 176
Score = 52.4 bits (124), Expect(2) = 2e-39
Identities = 25/40 (62%), Positives = 30/40 (75%)
Frame = -1
Query: 517 THAQIILNGLSKDLATLTKLTHKLFDFKAASEAKLLLTSL 398
THAQIILNGL DL T+TKLTHKL KA +A LL +++
Sbjct: 29 THAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI 68
>ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 783
Score = 133 bits (334), Expect(2) = 1e-38
Identities = 64/109 (58%), Positives = 85/109 (77%)
Frame = -3
Query: 329 PDKFLYNELIRGFSQNNSPFDSIAVYSHLRGKTDLKPDNFTYAFVVSAVSSSGLQKVGIL 150
PD FL+N L+RGFS N+SP SI++Y+HLR T+L PDNFTYAF V+A S+ K +L
Sbjct: 73 PDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSND---KHLML 129
Query: 149 LHGHVIVSGFGSDLFVGSALVDMYMNFSKMRYACRVFEGIPKRDGVLWN 3
LH H I+ G+GS++FVGSALVD+Y FS++ YA +VF+G+P+RD VLWN
Sbjct: 130 LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWN 178
Score = 52.8 bits (125), Expect(2) = 1e-38
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -1
Query: 517 THAQIILNGLSKDLATLTKLTHKLFDFKAASEAKLLLTSLSK 392
THAQ ILNG DLATLTKLT KLFDF A A+ L S+ K
Sbjct: 31 THAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFFSVPK 72
>ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 132 bits (333), Expect(2) = 1e-35
Identities = 63/109 (57%), Positives = 81/109 (74%)
Frame = -3
Query: 329 PDKFLYNELIRGFSQNNSPFDSIAVYSHLRGKTDLKPDNFTYAFVVSAVSSSGLQKVGIL 150
PD FL+N LIRGFS N P SI +Y+HLR KT+L+PDNFTYAF +SA S ++VG+L
Sbjct: 75 PDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVL 134
Query: 149 LHGHVIVSGFGSDLFVGSALVDMYMNFSKMRYACRVFEGIPKRDGVLWN 3
LH H IV G S+LFVGSA+VD+Y F++ A +VF+ +P+RD VLWN
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWN 183
Score = 43.1 bits (100), Expect(2) = 1e-35
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -1
Query: 511 AQIILNGLSKDLATLTKLTHKLFDFKAASEAKLLLTSLSK 392
AQ+IL+G+ DL+++TKLTHK FD A + + L +SK
Sbjct: 35 AQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSK 74
>ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 130 bits (327), Expect(2) = 5e-35
Identities = 62/109 (56%), Positives = 80/109 (73%)
Frame = -3
Query: 329 PDKFLYNELIRGFSQNNSPFDSIAVYSHLRGKTDLKPDNFTYAFVVSAVSSSGLQKVGIL 150
PD FL+N LIRGFS N P SI +Y+HLR T+L+PDNFTYAF +SA S ++VG+L
Sbjct: 75 PDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVL 134
Query: 149 LHGHVIVSGFGSDLFVGSALVDMYMNFSKMRYACRVFEGIPKRDGVLWN 3
LH H IV G S+LFVGSA+VD+Y F++ A +VF+ +P+RD VLWN
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWN 183
Score = 43.1 bits (100), Expect(2) = 5e-35
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -1
Query: 511 AQIILNGLSKDLATLTKLTHKLFDFKAASEAKLLLTSLSK 392
AQ+IL+G+ DL+++TKLTHK FD A + + L +SK
Sbjct: 35 AQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSK 74