BLASTX nr result

ID: Cephaelis21_contig00024906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024906
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519465.1| PREDICTED: rRNA-processing protein UTP23 hom...    95   5e-18
gb|ACU20877.1| unknown [Glycine max]                                   95   5e-18
ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 hom...    94   1e-17
ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 hom...    91   1e-16

>ref|XP_003519465.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 MRVKKQKRHRKIVRFFTACFGFREPFKVLCDGTLVHHLLVNRITPADT 285
           M+VKKQKRHRKI+ F+TACFGFR+PFKVLCDGT VHHLLVNRITPADT
Sbjct: 1   MKVKKQKRHRKILTFYTACFGFRKPFKVLCDGTFVHHLLVNRITPADT 48


>gb|ACU20877.1| unknown [Glycine max]
          Length = 231

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 42/48 (87%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 MRVKKQKRHRKIVRFFTACFGFREPFKVLCDGTLVHHLLVNRITPADT 285
           M+VKKQKRHRKI+ F+TACFGFR+PFKVLCDGT VHHLLVNRITPADT
Sbjct: 1   MKVKKQKRHRKILTFYTACFGFRKPFKVLCDGTFVHHLLVNRITPADT 48


>ref|XP_003545538.1| PREDICTED: rRNA-processing protein UTP23 homolog [Glycine max]
          Length = 285

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/48 (85%), Positives = 46/48 (95%)
 Frame = +1

Query: 142 MRVKKQKRHRKIVRFFTACFGFREPFKVLCDGTLVHHLLVNRITPADT 285
           M+VKKQKRHRKI+ F+TACFGFR+P+KVLCDGT VHHLLVNRITPADT
Sbjct: 1   MKVKKQKRHRKILTFYTACFGFRKPYKVLCDGTFVHHLLVNRITPADT 48


>ref|XP_002328233.1| predicted protein [Populus trichocarpa] gi|222837748|gb|EEE76113.1|
           predicted protein [Populus trichocarpa]
          Length = 251

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 38/48 (79%), Positives = 44/48 (91%)
 Frame = +1

Query: 142 MRVKKQKRHRKIVRFFTACFGFREPFKVLCDGTLVHHLLVNRITPADT 285
           MRVKKQKRHR+ VRF+TACFGFR+P+KVLCDGT +HHL+VN I PADT
Sbjct: 1   MRVKKQKRHRRAVRFYTACFGFRQPYKVLCDGTFIHHLIVNNIAPADT 48


>ref|XP_002276803.1| PREDICTED: rRNA-processing protein UTP23 homolog [Vitis vinifera]
           gi|296082256|emb|CBI21261.3| unnamed protein product
           [Vitis vinifera]
          Length = 284

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 39/47 (82%), Positives = 44/47 (93%)
 Frame = +1

Query: 142 MRVKKQKRHRKIVRFFTACFGFREPFKVLCDGTLVHHLLVNRITPAD 282
           MR+KKQKRHRKIVRF+TACFGFR+PFKVLCDGT VHHL+VN I+P D
Sbjct: 1   MRLKKQKRHRKIVRFYTACFGFRQPFKVLCDGTFVHHLIVNHISPPD 47


Top