BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024905
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276502.1| PREDICTED: splicing factor U2af small subuni...    99   2e-24
dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]      98   6e-24
ref|NP_174086.1| splicing factor U2af small subunit A [Arabidops...    98   6e-24
ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arab...    98   6e-24
ref|NP_001077609.1| splicing factor U2af small subunit A [Arabid...    98   6e-24

>ref|XP_002276502.1| PREDICTED: splicing factor U2af small subunit B isoform 1 [Vitis
           vinifera] gi|359491881|ref|XP_003634337.1| PREDICTED:
           splicing factor U2af small subunit B isoform 2 [Vitis
           vinifera]
          Length = 272

 Score = 99.0 bits (245), Expect(2) = 2e-24
 Identities = 50/62 (80%), Positives = 52/62 (83%)
 Frame = -3

Query: 374 KLGKFGEIESLNFYDNLADHMIGNVYV*FKEEE*AAATLQSLYGRFYSGRPIITDFSPSL 195
           +LGKFGEIESLN  DNLADHMIGNVYV FKEEE AAA LQ+L GRFYSGRPII DFSP  
Sbjct: 88  ELGKFGEIESLNVCDNLADHMIGNVYVQFKEEEQAAAALQALQGRFYSGRPIIADFSPVT 147

Query: 194 TF 189
            F
Sbjct: 148 DF 149



 Score = 40.8 bits (94), Expect(2) = 2e-24
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = -2

Query: 204 PVTDFREVTYRQFEENNCN 148
           PVTDFRE T RQFEENNCN
Sbjct: 145 PVTDFREATCRQFEENNCN 163


>dbj|BAJ34257.1| unnamed protein product [Thellungiella halophila]
          Length = 308

 Score = 98.2 bits (243), Expect(2) = 6e-24
 Identities = 49/62 (79%), Positives = 52/62 (83%)
 Frame = -3

Query: 374 KLGKFGEIESLNFYDNLADHMIGNVYV*FKEEE*AAATLQSLYGRFYSGRPIITDFSPSL 195
           +LGKFGEIESLN  DNLADHMIGNVYV FKEE+ AAA LQ+L GRFYSGRPII DFSP  
Sbjct: 88  ELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVT 147

Query: 194 TF 189
            F
Sbjct: 148 DF 149



 Score = 39.7 bits (91), Expect(2) = 6e-24
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 204 PVTDFREVTYRQFEENNCN 148
           PVTDFRE T RQ+EENNCN
Sbjct: 145 PVTDFREATCRQYEENNCN 163


>ref|NP_174086.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
           gi|75336807|sp|Q9S709.1|U2AFA_ARATH RecName:
           Full=Splicing factor U2af small subunit A; AltName:
           Full=U2 auxiliary factor 35 kDa subunit A; AltName:
           Full=U2 small nuclear ribonucleoprotein auxiliary factor
           small subunit A; Short=U2 snRNP auxiliary factor small
           subunit A; AltName: Full=Zinc finger CCCH
           domain-containing protein 8; Short=AtC3H8
           gi|5668775|gb|AAD46002.1|AC005916_14 Strong similarity
           to gb|Y18349 U2 snRNP auxiliary factor, small subunit
           from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come
           from this gene [Arabidopsis thaliana]
           gi|6693017|gb|AAF24943.1|AC012375_6 T22C5.10
           [Arabidopsis thaliana]
           gi|12744991|gb|AAK06875.1|AF344324_1 putative U2 snRNP
           auxiliary factor [Arabidopsis thaliana]
           gi|17528936|gb|AAL38678.1| putative U2 snRNP auxiliary
           factor [Arabidopsis thaliana] gi|19699275|gb|AAL91249.1|
           At1g27650/T22C5_2 [Arabidopsis thaliana]
           gi|20465943|gb|AAM20157.1| putative U2 snRNP auxiliary
           factor protein [Arabidopsis thaliana]
           gi|21595106|gb|AAM66073.1| putative U2 snRNP auxiliary
           factor [Arabidopsis thaliana] gi|21689611|gb|AAM67427.1|
           At1g27650/T22C5_2 [Arabidopsis thaliana]
           gi|332192737|gb|AEE30858.1| splicing factor U2af small
           subunit A [Arabidopsis thaliana]
          Length = 296

 Score = 98.2 bits (243), Expect(2) = 6e-24
 Identities = 49/62 (79%), Positives = 52/62 (83%)
 Frame = -3

Query: 374 KLGKFGEIESLNFYDNLADHMIGNVYV*FKEEE*AAATLQSLYGRFYSGRPIITDFSPSL 195
           +LGKFGEIESLN  DNLADHMIGNVYV FKEE+ AAA LQ+L GRFYSGRPII DFSP  
Sbjct: 88  ELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVT 147

Query: 194 TF 189
            F
Sbjct: 148 DF 149



 Score = 39.7 bits (91), Expect(2) = 6e-24
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 204 PVTDFREVTYRQFEENNCN 148
           PVTDFRE T RQ+EENNCN
Sbjct: 145 PVTDFREATCRQYEENNCN 163


>ref|XP_002890741.1| hypothetical protein ARALYDRAFT_472969 [Arabidopsis lyrata subsp.
           lyrata] gi|297336583|gb|EFH67000.1| hypothetical protein
           ARALYDRAFT_472969 [Arabidopsis lyrata subsp. lyrata]
          Length = 296

 Score = 98.2 bits (243), Expect(2) = 6e-24
 Identities = 49/62 (79%), Positives = 52/62 (83%)
 Frame = -3

Query: 374 KLGKFGEIESLNFYDNLADHMIGNVYV*FKEEE*AAATLQSLYGRFYSGRPIITDFSPSL 195
           +LGKFGEIESLN  DNLADHMIGNVYV FKEE+ AAA LQ+L GRFYSGRPII DFSP  
Sbjct: 88  ELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVT 147

Query: 194 TF 189
            F
Sbjct: 148 DF 149



 Score = 39.7 bits (91), Expect(2) = 6e-24
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 204 PVTDFREVTYRQFEENNCN 148
           PVTDFRE T RQ+EENNCN
Sbjct: 145 PVTDFREATCRQYEENNCN 163


>ref|NP_001077609.1| splicing factor U2af small subunit A [Arabidopsis thaliana]
           gi|332192738|gb|AEE30859.1| splicing factor U2af small
           subunit A [Arabidopsis thaliana]
          Length = 246

 Score = 98.2 bits (243), Expect(2) = 6e-24
 Identities = 49/62 (79%), Positives = 52/62 (83%)
 Frame = -3

Query: 374 KLGKFGEIESLNFYDNLADHMIGNVYV*FKEEE*AAATLQSLYGRFYSGRPIITDFSPSL 195
           +LGKFGEIESLN  DNLADHMIGNVYV FKEE+ AAA LQ+L GRFYSGRPII DFSP  
Sbjct: 38  ELGKFGEIESLNICDNLADHMIGNVYVQFKEEDQAAAALQALQGRFYSGRPIIADFSPVT 97

Query: 194 TF 189
            F
Sbjct: 98  DF 99



 Score = 39.7 bits (91), Expect(2) = 6e-24
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = -2

Query: 204 PVTDFREVTYRQFEENNCN 148
           PVTDFRE T RQ+EENNCN
Sbjct: 95  PVTDFREATCRQYEENNCN 113