BLASTX nr result

ID: Cephaelis21_contig00024877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024877
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-lik...    90   2e-16
ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...    89   5e-16
ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-lik...    89   5e-16
emb|CBI29964.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002535175.1| hypothetical protein RCOM_2050800 [Ricinus c...    86   4e-15

>ref|XP_002276675.1| PREDICTED: pre-mRNA-splicing factor rse1-like [Vitis vinifera]
          Length = 1387

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 52/74 (70%), Positives = 59/74 (79%), Gaps = 3/74 (4%)
 Frame = +3

Query: 3    RSRESSVGARKMLDGDMLAQFLELTSMQQEAVLALHLSSPNKVMPSTKQ---SPPHITVN 173
            RSRE+S G  K+LDGDMLAQFLELTSMQQEAVLAL L S   V  S+KQ   SP  I+VN
Sbjct: 1316 RSRENSAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSP--ISVN 1373

Query: 174  QIVRLLERVHYALN 215
            ++V+LLERVHYALN
Sbjct: 1374 RVVQLLERVHYALN 1387


>ref|XP_004165211.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 158

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/71 (60%), Positives = 55/71 (77%)
 Frame = +3

Query: 3   RSRESSVGARKMLDGDMLAQFLELTSMQQEAVLALHLSSPNKVMPSTKQSPPHITVNQIV 182
           RSRE+ +G  K+LDGD+L QFLELTSMQQE VL+  + S + V PS+K  P  I +NQ+V
Sbjct: 88  RSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVGSLSAVKPSSKSMPASIPINQVV 147

Query: 183 RLLERVHYALN 215
           +LLER+HYALN
Sbjct: 148 QLLERIHYALN 158


>ref|XP_004136549.1| PREDICTED: pre-mRNA-splicing factor RSE1-like [Cucumis sativus]
          Length = 1376

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/71 (60%), Positives = 55/71 (77%)
 Frame = +3

Query: 3    RSRESSVGARKMLDGDMLAQFLELTSMQQEAVLALHLSSPNKVMPSTKQSPPHITVNQIV 182
            RSRE+ +G  K+LDGD+L QFLELTSMQQE VL+  + S + V PS+K  P  I +NQ+V
Sbjct: 1306 RSRENPIGVPKILDGDILTQFLELTSMQQELVLSSSVGSLSAVKPSSKSMPASIPINQVV 1365

Query: 183  RLLERVHYALN 215
            +LLER+HYALN
Sbjct: 1366 QLLERIHYALN 1376


>emb|CBI29964.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/77 (68%), Positives = 60/77 (77%), Gaps = 6/77 (7%)
 Frame = +3

Query: 3    RSRESSV---GARKMLDGDMLAQFLELTSMQQEAVLALHLSSPNKVMPSTKQ---SPPHI 164
            RSRE+SV   G  K+LDGDMLAQFLELTSMQQEAVLAL L S   V  S+KQ   SP  I
Sbjct: 1289 RSRENSVRKAGVSKILDGDMLAQFLELTSMQQEAVLALPLGSLETVTSSSKQTLLSP--I 1346

Query: 165  TVNQIVRLLERVHYALN 215
            +VN++V+LLERVHYALN
Sbjct: 1347 SVNRVVQLLERVHYALN 1363


>ref|XP_002535175.1| hypothetical protein RCOM_2050800 [Ricinus communis]
           gi|223523827|gb|EEF27208.1| hypothetical protein
           RCOM_2050800 [Ricinus communis]
          Length = 94

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 46/71 (64%), Positives = 54/71 (76%)
 Frame = +3

Query: 3   RSRESSVGARKMLDGDMLAQFLELTSMQQEAVLALHLSSPNKVMPSTKQSPPHITVNQIV 182
           RSRE+ VGA K+LDGD+LAQFLELTS QQEA+L+L L   + V    K  P  I VNQ+V
Sbjct: 24  RSRENPVGAPKILDGDVLAQFLELTSAQQEAILSLPLGLLDTVKKGLKPLPLPIPVNQVV 83

Query: 183 RLLERVHYALN 215
           +LLERVHYALN
Sbjct: 84  QLLERVHYALN 94


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