BLASTX nr result

ID: Cephaelis21_contig00024813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024813
         (712 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...   217   2e-54
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas...   214   1e-53
emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]   212   5e-53
emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]   210   2e-52
emb|CAN79138.1| hypothetical protein VITISV_034815 [Vitis vinifera]   209   6e-52

>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1229

 Score =  217 bits (553), Expect = 2e-54
 Identities = 104/235 (44%), Positives = 155/235 (65%), Gaps = 2/235 (0%)
 Frame = +2

Query: 11   IPNIINNEDNNFLQAIPSDTEIHQMIFEMDPNSAPGPDGFSGLFFQSCWQIIRKDVVQAI 190
            I  +++  DN+FL  IP+D E+   +F ++ + APGPDGF+  F+ S W II  DV + I
Sbjct: 307  IEPMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREI 366

Query: 191  QSFFCGSSLPSGYSATLITLIPKNSNPHSFSEFRPISLCNFIYKLISKILTKRLEQFLPK 370
            + FF   + P   + T I LIPK+  P   +++RPI+LCN  YK+++KI+TKR++  LPK
Sbjct: 367  RLFFTSKNFPRRMNETHIRLIPKDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPK 426

Query: 371  LISLNQCGFVKGRQMSDNILLAQELTTHL--NSRSRGGNSILKLDLSKAFDRVSWVFILA 544
            LIS NQ  FV GR +SDN+L+  E+   L  +S  +  +  +K D+SKA+DRV W F+  
Sbjct: 427  LISENQSAFVPGRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKK 486

Query: 545  VMRKFGFGEIWLDMIWRLISNCHFSVLINGSPFGYFPSSRGLRQGDPISPALFII 709
            V+++FGF  IW+D +   +++  +S LING+P G    +RGLRQGDP+SP LFI+
Sbjct: 487  VLQRFGFHSIWIDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFIL 541


>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 528

 Score =  214 bits (546), Expect = 1e-53
 Identities = 102/229 (44%), Positives = 150/229 (65%)
 Frame = +2

Query: 26  NNEDNNFLQAIPSDTEIHQMIFEMDPNSAPGPDGFSGLFFQSCWQIIRKDVVQAIQSFFC 205
           N   N+ L  IPS+ EI Q +F ++ +SAPGPDGF   F+Q  W I+++DV++A+  FF 
Sbjct: 105 NQIANHALTMIPSNDEIKQAVFSLNNDSAPGPDGFGSCFYQIYWDIVKEDVIKAVLQFFN 164

Query: 206 GSSLPSGYSATLITLIPKNSNPHSFSEFRPISLCNFIYKLISKILTKRLEQFLPKLISLN 385
              +   ++A  + LIPK  N  S  +FRPI++ NF +K+ISKIL  RL Q +P ++S  
Sbjct: 165 TGWILPNFNANTLILIPKTQNADSMDQFRPIAMANFKFKIISKILADRLAQIMPNIVSQE 224

Query: 386 QCGFVKGRQMSDNILLAQELTTHLNSRSRGGNSILKLDLSKAFDRVSWVFILAVMRKFGF 565
           Q GF++GR + D + LA E    L+ +S GGN   K+D+SKAFD ++W F+L V+++FGF
Sbjct: 225 QRGFIQGRNIKDCVCLASEAINMLDQKSFGGNLAFKVDISKAFDTLNWKFLLKVLKQFGF 284

Query: 566 GEIWLDMIWRLISNCHFSVLINGSPFGYFPSSRGLRQGDPISPALFIIA 712
            E + + I  ++ +   S+ INGS  GYF  SRG+RQGDP+SP LF +A
Sbjct: 285 SETFCNWIDAILQSAKLSICINGSQQGYFSCSRGVRQGDPLSPLLFCLA 333


>emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]
          Length = 1215

 Score =  212 bits (540), Expect = 5e-53
 Identities = 97/216 (44%), Positives = 144/216 (66%)
 Frame = +2

Query: 62   SDTEIHQMIFEMDPNSAPGPDGFSGLFFQSCWQIIRKDVVQAIQSFFCGSSLPSGYSATL 241
            ++ EIH  +  M+ + APGPDGF+  F+Q CW+ +++++V   + FF   S     ++T 
Sbjct: 503  TEAEIHSALMGMNGDKAPGPDGFTVAFWQFCWEFVKEEIVDVFKEFFEDKSFAKSLNSTF 562

Query: 242  ITLIPKNSNPHSFSEFRPISLCNFIYKLISKILTKRLEQFLPKLISLNQCGFVKGRQMSD 421
            + LIPK        +FRPISL   +YKL++K+L  R+++ L K++SL+Q  FVKGRQ+ D
Sbjct: 563  LVLIPKKGGAEDLGDFRPISLLGGVYKLLAKVLANRIKEVLDKVVSLDQNAFVKGRQILD 622

Query: 422  NILLAQELTTHLNSRSRGGNSILKLDLSKAFDRVSWVFILAVMRKFGFGEIWLDMIWRLI 601
              L+A E+  +   R   G  I KLD+ KA+D ++W F++ VMRK GFG+ W+  IW  I
Sbjct: 623  ASLIANEVIDYWFKRKEKG-LICKLDIEKAYDSINWNFLMKVMRKMGFGDRWMKWIWWCI 681

Query: 602  SNCHFSVLINGSPFGYFPSSRGLRQGDPISPALFII 709
            S+  FS+L+NG P GYFP+SRGLRQGDP+SP LF++
Sbjct: 682  SSASFSILVNGVPAGYFPNSRGLRQGDPLSPYLFVL 717


>emb|CAN78583.1| hypothetical protein VITISV_029931 [Vitis vinifera]
          Length = 1875

 Score =  210 bits (535), Expect = 2e-52
 Identities = 94/213 (44%), Positives = 142/213 (66%)
 Frame = +2

Query: 71   EIHQMIFEMDPNSAPGPDGFSGLFFQSCWQIIRKDVVQAIQSFFCGSSLPSGYSATLITL 250
            EIH  + +M+ + APGPDGF+G F+Q+CW+ ++++++   + FF   S     + T + L
Sbjct: 1175 EIHSALMDMNGDKAPGPDGFTGAFWQTCWEFVKEEIMDLFKEFFVQKSFAKSLNTTFLVL 1234

Query: 251  IPKNSNPHSFSEFRPISLCNFIYKLISKILTKRLEQFLPKLISLNQCGFVKGRQMSDNIL 430
            IPK        EFRPISL   +YKL++K+L  RL++ L K++S++Q  FV+GRQ+ D  L
Sbjct: 1235 IPKKGGAEDLGEFRPISLLGGLYKLVAKVLANRLKKVLGKVVSMDQNAFVRGRQILDASL 1294

Query: 431  LAQELTTHLNSRSRGGNSILKLDLSKAFDRVSWVFILAVMRKFGFGEIWLDMIWRLISNC 610
            +A E+      R   G  I KLD+ KA+D ++W F++ V++K GFG  W++ IW  IS  
Sbjct: 1295 IANEVVDFWYKRKEKG-LICKLDIEKAYDSINWNFLMKVLQKMGFGSRWMEWIWWCISTA 1353

Query: 611  HFSVLINGSPFGYFPSSRGLRQGDPISPALFII 709
             FS+L+NG P G+FPSS+GLRQGDP+SP LF++
Sbjct: 1354 KFSILVNGVPAGFFPSSKGLRQGDPLSPYLFVM 1386


>emb|CAN79138.1| hypothetical protein VITISV_034815 [Vitis vinifera]
          Length = 1596

 Score =  209 bits (531), Expect = 6e-52
 Identities = 94/213 (44%), Positives = 141/213 (66%)
 Frame = +2

Query: 71   EIHQMIFEMDPNSAPGPDGFSGLFFQSCWQIIRKDVVQAIQSFFCGSSLPSGYSATLITL 250
            EIH  +  M+ + APGPDGF+G F+Q+CW+ +++D++   + F+   S     + T + L
Sbjct: 903  EIHAALMGMNGDKAPGPDGFTGAFWQTCWEFVKEDIMDLFKEFYVQKSFEKSLNTTFLVL 962

Query: 251  IPKNSNPHSFSEFRPISLCNFIYKLISKILTKRLEQFLPKLISLNQCGFVKGRQMSDNIL 430
            IPK        EFRPISL   +YKL++K+L  RL++ L K++S++Q  FV+GRQ+ D  L
Sbjct: 963  IPKKGGAEDLGEFRPISLLGGLYKLVAKVLANRLKKVLGKVVSMDQNAFVRGRQILDASL 1022

Query: 431  LAQELTTHLNSRSRGGNSILKLDLSKAFDRVSWVFILAVMRKFGFGEIWLDMIWRLISNC 610
            +A E+      R   G  I KLD+ KA+D ++W F++ V++K GFG  W++ IW  IS  
Sbjct: 1023 IANEVVDFWYKRKEKG-LICKLDIEKAYDSINWSFLMKVLQKMGFGTWWMEWIWWCISTA 1081

Query: 611  HFSVLINGSPFGYFPSSRGLRQGDPISPALFII 709
             FS+L+NG P G+FPSS+GLRQGDP+SP LF++
Sbjct: 1082 KFSILVNGVPAGFFPSSKGLRQGDPLSPYLFVM 1114