BLASTX nr result

ID: Cephaelis21_contig00024721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024721
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_004169818.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    65   7e-09
ref|XP_004152157.1| PREDICTED: uncharacterized protein LOC101204...    65   7e-09
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08

>ref|XP_002299341.1| predicted protein [Populus trichocarpa] gi|222846599|gb|EEE84146.1|
           predicted protein [Populus trichocarpa]
          Length = 306

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 11/81 (13%)
 Frame = -1

Query: 299 RVRAVAPAKVLGPPPSAAVDMDEEKSSMEL-----------GKKRSLSISVLLSKPILAL 153
           RVRAV  AKV GP      D +E +S ++L            + ++LSISV+LSKPILAL
Sbjct: 223 RVRAVQAAKVSGPSSPPKHDTEESQSQLKLKTVEPSSRELLDEGQNLSISVMLSKPILAL 282

Query: 152 EFNCLKMKVGAPTVVTTHSKN 90
           E +CLKM+V AP VV+ HSK+
Sbjct: 283 ELSCLKMQVEAPVVVSQHSKS 303


>ref|XP_002303755.1| predicted protein [Populus trichocarpa] gi|222841187|gb|EEE78734.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/68 (55%), Positives = 49/68 (72%)
 Frame = -1

Query: 299 RVRAVAPAKVLGPPPSAAVDMDEEKSSMELGKKRSLSISVLLSKPILALEFNCLKMKVGA 120
           RVRAV  AKV  P  ++  D +E  S  E   +++L+ISV+LSKPILALEF+CLKM+V A
Sbjct: 218 RVRAVRAAKVSRPSLTSKQDAEESLSEHE---RQNLTISVMLSKPILALEFSCLKMQVEA 274

Query: 119 PTVVTTHS 96
           P VV+ HS
Sbjct: 275 PVVVSQHS 282


>ref|XP_004169818.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101230754 [Cucumis sativus]
          Length = 289

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
 Frame = -1

Query: 299 RVRAVAPAKVLGPPPSAAVDMDEEKSSMELGK----KRSLSISVLLSKPILALEFNCLKM 132
           RVRAV PA V  P  + A D D        G+    ++SL  SVLLSKPILALEF+C++M
Sbjct: 211 RVRAVKPATVSIPALNRAEDGDHHSHITRTGEYGEHEQSLCTSVLLSKPILALEFSCMEM 270

Query: 131 KVGAPTVVTTHSKNPLR 81
           +V APTVV+ + K+ LR
Sbjct: 271 QVQAPTVVSQYFKHSLR 287


>ref|XP_004152157.1| PREDICTED: uncharacterized protein LOC101204328 [Cucumis sativus]
          Length = 289

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
 Frame = -1

Query: 299 RVRAVAPAKVLGPPPSAAVDMDEEKSSMELGK----KRSLSISVLLSKPILALEFNCLKM 132
           RVRAV PA V  P  + A D D        G+    ++SL  SVLLSKPILALEF+C++M
Sbjct: 211 RVRAVKPATVSIPALNRAEDGDHHSHITRTGEYGEHEQSLCTSVLLSKPILALEFSCMEM 270

Query: 131 KVGAPTVVTTHSKNPLR 81
           +V APTVV+ + K+ LR
Sbjct: 271 QVQAPTVVSQYFKHSLR 287


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Vitis vinifera]
          Length = 835

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 15/87 (17%)
 Frame = -1

Query: 299  RVRAVAPAKVLGPPPSAAVDMDEEK---------SSME------LGKKRSLSISVLLSKP 165
            RVRAV PA+V  P P    + + EK         SSM+      +    +L +SV+LSKP
Sbjct: 746  RVRAVKPARVSSPSPGPKNEKENEKEGSPRHQIFSSMDSTAVETIENGENLCVSVMLSKP 805

Query: 164  ILALEFNCLKMKVGAPTVVTTHSKNPL 84
            +LALEFNCL M+V AP VV+  SKN L
Sbjct: 806  VLALEFNCLNMQVEAPIVVSHCSKNTL 832


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