BLASTX nr result

ID: Cephaelis21_contig00024549 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024549
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532346.1| gamma-tubulin complex component, putative [R...   145   3e-33
ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubuli...   143   1e-32
ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3...   143   1e-32
ref|XP_002309295.1| tubulin gamma complex-associated protein [Po...   141   6e-32
ref|XP_002322735.1| tubulin gamma complex-associated protein [Po...   139   2e-31

>ref|XP_002532346.1| gamma-tubulin complex component, putative [Ricinus communis]
           gi|223527963|gb|EEF30048.1| gamma-tubulin complex
           component, putative [Ricinus communis]
          Length = 855

 Score =  145 bits (366), Expect = 3e-33
 Identities = 77/123 (62%), Positives = 89/123 (72%)
 Frame = -3

Query: 369 EDDDQKVLDLVKELVHRLLYXXXXXXXXXXXXXXXXXSVTPQQFQQSLRYALRILSSRMN 190
           E+D QK++DLVKELVHRLL                        FQ +LRYA+RILSSR+ 
Sbjct: 3   EEDQQKIIDLVKELVHRLLSQNPNFKTPNSNP-------NSTDFQNALRYAVRILSSRLT 55

Query: 189 PSIAPDDAAMAESIKRHLATQGKSSEALTFTDLYSKFSMKTGPGSVKNKWAVLYLLKTIS 10
           PSI+PD AA+AESIKR LATQGKSS+ALTF DLY+KF+ K GPGSV NKWAVLYLLK IS
Sbjct: 56  PSISPDSAAIAESIKRRLATQGKSSQALTFADLYNKFASKNGPGSVNNKWAVLYLLKIIS 115

Query: 9   EDQ 1
           ED+
Sbjct: 116 EDE 118


>ref|XP_004161669.1| PREDICTED: LOW QUALITY PROTEIN: gamma-tubulin complex component
           3-like [Cucumis sativus]
          Length = 846

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/123 (62%), Positives = 90/123 (73%)
 Frame = -3

Query: 369 EDDDQKVLDLVKELVHRLLYXXXXXXXXXXXXXXXXXSVTPQQFQQSLRYALRILSSRMN 190
           EDD  KVLDL+K+LV RLL                    T   FQ+SLRYA+RIL+SRM 
Sbjct: 3   EDDSTKVLDLIKDLVLRLLSHNPTSNSSP----------TSSDFQKSLRYAIRILTSRMT 52

Query: 189 PSIAPDDAAMAESIKRHLATQGKSSEALTFTDLYSKFSMKTGPGSVKNKWAVLYLLKTIS 10
           PSIAPD AA+AESIKR LAT+GKSS+ALTF DLY+KF+ KTGPGSV NKWAVLYLLK ++
Sbjct: 53  PSIAPDAAAIAESIKRRLATEGKSSQALTFADLYTKFASKTGPGSVNNKWAVLYLLKIVA 112

Query: 9   EDQ 1
           ED+
Sbjct: 113 EDR 115


>ref|XP_004144694.1| PREDICTED: gamma-tubulin complex component 3-like [Cucumis sativus]
          Length = 846

 Score =  143 bits (361), Expect = 1e-32
 Identities = 77/123 (62%), Positives = 90/123 (73%)
 Frame = -3

Query: 369 EDDDQKVLDLVKELVHRLLYXXXXXXXXXXXXXXXXXSVTPQQFQQSLRYALRILSSRMN 190
           EDD  KVLDL+K+LV RLL                    T   FQ+SLRYA+RIL+SRM 
Sbjct: 3   EDDSTKVLDLIKDLVLRLLSHNPTSNSSP----------TSSDFQKSLRYAIRILTSRMT 52

Query: 189 PSIAPDDAAMAESIKRHLATQGKSSEALTFTDLYSKFSMKTGPGSVKNKWAVLYLLKTIS 10
           PSIAPD AA+AESIKR LAT+GKSS+ALTF DLY+KF+ KTGPGSV NKWAVLYLLK ++
Sbjct: 53  PSIAPDAAAIAESIKRRLATEGKSSQALTFADLYTKFASKTGPGSVNNKWAVLYLLKIVA 112

Query: 9   EDQ 1
           ED+
Sbjct: 113 EDR 115


>ref|XP_002309295.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222855271|gb|EEE92818.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 860

 Score =  141 bits (355), Expect = 6e-32
 Identities = 77/122 (63%), Positives = 87/122 (71%)
 Frame = -3

Query: 369 EDDDQKVLDLVKELVHRLLYXXXXXXXXXXXXXXXXXSVTPQQFQQSLRYALRILSSRMN 190
           EDD Q +LDLVKELV+RLL                        FQ SLRYA+RILSSR+ 
Sbjct: 5   EDDQQNILDLVKELVNRLLSQNPQNPRPPISNPNP----NSPDFQNSLRYAIRILSSRLT 60

Query: 189 PSIAPDDAAMAESIKRHLATQGKSSEALTFTDLYSKFSMKTGPGSVKNKWAVLYLLKTIS 10
           PSIAPD AA+AESIKR LATQGKSS+ALT  +LY+KF+ KTGPGS+ NKWAVLYLLK IS
Sbjct: 61  PSIAPDAAAIAESIKRGLATQGKSSQALTLAELYNKFASKTGPGSINNKWAVLYLLKIIS 120

Query: 9   ED 4
           ED
Sbjct: 121 ED 122


>ref|XP_002322735.1| tubulin gamma complex-associated protein [Populus trichocarpa]
           gi|222867365|gb|EEF04496.1| tubulin gamma
           complex-associated protein [Populus trichocarpa]
          Length = 844

 Score =  139 bits (351), Expect = 2e-31
 Identities = 77/126 (61%), Positives = 92/126 (73%), Gaps = 2/126 (1%)
 Frame = -3

Query: 372 MEDDDQKVLDLVKELVHRLLYXXXXXXXXXXXXXXXXXSVTPQQ--FQQSLRYALRILSS 199
           ME+D Q +LDLVKELV+RLL                  + TP    FQ SLRYA+RILSS
Sbjct: 1   MEEDQQTILDLVKELVNRLL------SQNPQNPKPPISNTTPNSPDFQNSLRYAIRILSS 54

Query: 198 RMNPSIAPDDAAMAESIKRHLATQGKSSEALTFTDLYSKFSMKTGPGSVKNKWAVLYLLK 19
           R+ PSIAPD  A++ESIKR LATQGKSS+ALTF++LY+KF+ KTG GS+ NKWAVLYLLK
Sbjct: 55  RLTPSIAPDAVAISESIKRGLATQGKSSQALTFSELYNKFASKTGSGSINNKWAVLYLLK 114

Query: 18  TISEDQ 1
            ISED+
Sbjct: 115 IISEDK 120


Top