BLASTX nr result
ID: Cephaelis21_contig00024546
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00024546 (496 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel... 81 9e-14 emb|CBI35366.3| unnamed protein product [Vitis vinifera] 81 9e-14 ref|XP_002310362.1| chromatin remodeling complex subunit [Populu... 67 2e-09 ref|NP_564568.1| SNF2 and helicase domain-containing protein [Ar... 60 1e-07 ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis ... 60 2e-07 >ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like [Vitis vinifera] Length = 1013 Score = 80.9 bits (198), Expect(2) = 9e-14 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 20/143 (13%) Frame = +1 Query: 103 DYGWPTSKRPKRILPTTLQTSMANSGRQNFV---------DMSNRHFH--------LNY- 228 DY + +R LP+TLQ S ++G N V D + FH +NY Sbjct: 137 DYEKLSQPAMRRTLPSTLQPSAPSAGMNNTVGNIGSSHIHDSQGKSFHPVGPILNNMNYM 196 Query: 229 --DFGRGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGT 402 FGRG N+D V+M+EN GSR+L PSL HG+ S Y +S ++ G +E T Sbjct: 197 KEHFGRG--NDDEVIMYENSGSRILPPSLMHGKSVPSTQYGGVSESAYRPGVAEEMAANT 254 Query: 403 DERILFQAALKYLNGTTGEIDIP 471 DER+++QAAL+ LN E +P Sbjct: 255 DERLVYQAALQDLNQPKVEATLP 277 Score = 20.4 bits (41), Expect(2) = 9e-14 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 449 LQVKLTYPRKIALAWL 496 L V L +KIALAW+ Sbjct: 281 LTVSLLRHQKIALAWM 296 >emb|CBI35366.3| unnamed protein product [Vitis vinifera] Length = 907 Score = 80.9 bits (198), Expect(2) = 9e-14 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 20/143 (13%) Frame = +1 Query: 103 DYGWPTSKRPKRILPTTLQTSMANSGRQNFV---------DMSNRHFH--------LNY- 228 DY + +R LP+TLQ S ++G N V D + FH +NY Sbjct: 133 DYEKLSQPAMRRTLPSTLQPSAPSAGMNNTVGNIGSSHIHDSQGKSFHPVGPILNNMNYM 192 Query: 229 --DFGRGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGT 402 FGRG N+D V+M+EN GSR+L PSL HG+ S Y +S ++ G +E T Sbjct: 193 KEHFGRG--NDDEVIMYENSGSRILPPSLMHGKSVPSTQYGGVSESAYRPGVAEEMAANT 250 Query: 403 DERILFQAALKYLNGTTGEIDIP 471 DER+++QAAL+ LN E +P Sbjct: 251 DERLVYQAALQDLNQPKVEATLP 273 Score = 20.4 bits (41), Expect(2) = 9e-14 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 449 LQVKLTYPRKIALAWL 496 L V L +KIALAW+ Sbjct: 277 LTVSLLRHQKIALAWM 292 >ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222853265|gb|EEE90812.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 923 Score = 66.6 bits (161), Expect = 2e-09 Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 19/132 (14%) Frame = +1 Query: 133 KRILPTTLQTSMANSGRQNFV---------DMSNRHFHL---NYDFGRG-------RVNE 255 KR LP++L S ++ N V D+ +HL + RG + N Sbjct: 63 KRTLPSSLHPSEPSNKANNTVENASSSGSRDIYGNAYHLAGPSVTNSRGYTRDIHSKRNN 122 Query: 256 DGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGTDERILFQAALK 435 D ++M+EN GSR+ PS HG+P++ P S P +H DEN GTDER+++QAAL+ Sbjct: 123 DDIMMYENNGSRIPPPSFMHGKPSAQFP--GPSEPVYHSMAGDENAAGTDERLVYQAALE 180 Query: 436 YLNGTTGEIDIP 471 LN E ++P Sbjct: 181 DLNQPKVEANLP 192 >ref|NP_564568.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gi|14532630|gb|AAK64043.1| putative DNA-binding protein [Arabidopsis thaliana] gi|23296945|gb|AAN13207.1| putative DNA-binding protein [Arabidopsis thaliana] gi|332194424|gb|AEE32545.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana] Length = 981 Score = 60.1 bits (144), Expect(2) = 1e-07 Identities = 31/78 (39%), Positives = 46/78 (58%) Frame = +1 Query: 238 RGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGTDERIL 417 RG ++D + G+R+L PS+AHG AS + + LS P H G +E DER++ Sbjct: 141 RGGAHDDLGMGRVTNGTRILPPSVAHGTSASPSHFNGLSDPMHRNGIGEERNSENDERLI 200 Query: 418 FQAALKYLNGTTGEIDIP 471 +QAAL+ LN E+D+P Sbjct: 201 YQAALQELNQPKSEVDLP 218 Score = 20.4 bits (41), Expect(2) = 1e-07 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 449 LQVKLTYPRKIALAWL 496 L V L +KIALAW+ Sbjct: 222 LSVPLMKHQKIALAWM 237 >ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297337416|gb|EFH67833.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 980 Score = 59.7 bits (143), Expect(2) = 2e-07 Identities = 30/78 (38%), Positives = 46/78 (58%) Frame = +1 Query: 238 RGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGTDERIL 417 RG +++ + G+R+L PS+AHG AS + + LS P H G +E DER++ Sbjct: 141 RGGAHDEIGMGRVTNGTRILPPSVAHGTSASPSHFNGLSDPMHRNGIAEERNSENDERLI 200 Query: 418 FQAALKYLNGTTGEIDIP 471 +QAAL+ LN E+D+P Sbjct: 201 YQAALQELNQPKSEVDLP 218 Score = 20.4 bits (41), Expect(2) = 2e-07 Identities = 9/16 (56%), Positives = 11/16 (68%) Frame = +2 Query: 449 LQVKLTYPRKIALAWL 496 L V L +KIALAW+ Sbjct: 222 LSVPLMKHQKIALAWM 237