BLASTX nr result

ID: Cephaelis21_contig00024546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024546
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent hel...    81   9e-14
emb|CBI35366.3| unnamed protein product [Vitis vinifera]               81   9e-14
ref|XP_002310362.1| chromatin remodeling complex subunit [Populu...    67   2e-09
ref|NP_564568.1| SNF2 and helicase domain-containing protein [Ar...    60   1e-07
ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis ...    60   2e-07

>ref|XP_002267403.2| PREDICTED: uncharacterized ATP-dependent helicase C23E6.02-like
           [Vitis vinifera]
          Length = 1013

 Score = 80.9 bits (198), Expect(2) = 9e-14
 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
 Frame = +1

Query: 103 DYGWPTSKRPKRILPTTLQTSMANSGRQNFV---------DMSNRHFH--------LNY- 228
           DY   +    +R LP+TLQ S  ++G  N V         D   + FH        +NY 
Sbjct: 137 DYEKLSQPAMRRTLPSTLQPSAPSAGMNNTVGNIGSSHIHDSQGKSFHPVGPILNNMNYM 196

Query: 229 --DFGRGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGT 402
              FGRG  N+D V+M+EN GSR+L PSL HG+   S  Y  +S  ++  G  +E    T
Sbjct: 197 KEHFGRG--NDDEVIMYENSGSRILPPSLMHGKSVPSTQYGGVSESAYRPGVAEEMAANT 254

Query: 403 DERILFQAALKYLNGTTGEIDIP 471
           DER+++QAAL+ LN    E  +P
Sbjct: 255 DERLVYQAALQDLNQPKVEATLP 277



 Score = 20.4 bits (41), Expect(2) = 9e-14
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 449 LQVKLTYPRKIALAWL 496
           L V L   +KIALAW+
Sbjct: 281 LTVSLLRHQKIALAWM 296


>emb|CBI35366.3| unnamed protein product [Vitis vinifera]
          Length = 907

 Score = 80.9 bits (198), Expect(2) = 9e-14
 Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
 Frame = +1

Query: 103 DYGWPTSKRPKRILPTTLQTSMANSGRQNFV---------DMSNRHFH--------LNY- 228
           DY   +    +R LP+TLQ S  ++G  N V         D   + FH        +NY 
Sbjct: 133 DYEKLSQPAMRRTLPSTLQPSAPSAGMNNTVGNIGSSHIHDSQGKSFHPVGPILNNMNYM 192

Query: 229 --DFGRGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGT 402
              FGRG  N+D V+M+EN GSR+L PSL HG+   S  Y  +S  ++  G  +E    T
Sbjct: 193 KEHFGRG--NDDEVIMYENSGSRILPPSLMHGKSVPSTQYGGVSESAYRPGVAEEMAANT 250

Query: 403 DERILFQAALKYLNGTTGEIDIP 471
           DER+++QAAL+ LN    E  +P
Sbjct: 251 DERLVYQAALQDLNQPKVEATLP 273



 Score = 20.4 bits (41), Expect(2) = 9e-14
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 449 LQVKLTYPRKIALAWL 496
           L V L   +KIALAW+
Sbjct: 277 LTVSLLRHQKIALAWM 292


>ref|XP_002310362.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222853265|gb|EEE90812.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 923

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 19/132 (14%)
 Frame = +1

Query: 133 KRILPTTLQTSMANSGRQNFV---------DMSNRHFHL---NYDFGRG-------RVNE 255
           KR LP++L  S  ++   N V         D+    +HL   +    RG       + N 
Sbjct: 63  KRTLPSSLHPSEPSNKANNTVENASSSGSRDIYGNAYHLAGPSVTNSRGYTRDIHSKRNN 122

Query: 256 DGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGTDERILFQAALK 435
           D ++M+EN GSR+  PS  HG+P++  P    S P +H    DEN  GTDER+++QAAL+
Sbjct: 123 DDIMMYENNGSRIPPPSFMHGKPSAQFP--GPSEPVYHSMAGDENAAGTDERLVYQAALE 180

Query: 436 YLNGTTGEIDIP 471
            LN    E ++P
Sbjct: 181 DLNQPKVEANLP 192


>ref|NP_564568.1| SNF2 and helicase domain-containing protein [Arabidopsis thaliana]
           gi|14532630|gb|AAK64043.1| putative DNA-binding protein
           [Arabidopsis thaliana] gi|23296945|gb|AAN13207.1|
           putative DNA-binding protein [Arabidopsis thaliana]
           gi|332194424|gb|AEE32545.1| SNF2 and helicase
           domain-containing protein [Arabidopsis thaliana]
          Length = 981

 Score = 60.1 bits (144), Expect(2) = 1e-07
 Identities = 31/78 (39%), Positives = 46/78 (58%)
 Frame = +1

Query: 238 RGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGTDERIL 417
           RG  ++D  +     G+R+L PS+AHG  AS + +  LS P H  G  +E     DER++
Sbjct: 141 RGGAHDDLGMGRVTNGTRILPPSVAHGTSASPSHFNGLSDPMHRNGIGEERNSENDERLI 200

Query: 418 FQAALKYLNGTTGEIDIP 471
           +QAAL+ LN    E+D+P
Sbjct: 201 YQAALQELNQPKSEVDLP 218



 Score = 20.4 bits (41), Expect(2) = 1e-07
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 449 LQVKLTYPRKIALAWL 496
           L V L   +KIALAW+
Sbjct: 222 LSVPLMKHQKIALAWM 237


>ref|XP_002891574.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337416|gb|EFH67833.1| SNF2 domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 980

 Score = 59.7 bits (143), Expect(2) = 2e-07
 Identities = 30/78 (38%), Positives = 46/78 (58%)
 Frame = +1

Query: 238 RGRVNEDGVVMHENKGSRVLLPSLAHGRPASSNPYVNLSVPSHHMGDVDENPRGTDERIL 417
           RG  +++  +     G+R+L PS+AHG  AS + +  LS P H  G  +E     DER++
Sbjct: 141 RGGAHDEIGMGRVTNGTRILPPSVAHGTSASPSHFNGLSDPMHRNGIAEERNSENDERLI 200

Query: 418 FQAALKYLNGTTGEIDIP 471
           +QAAL+ LN    E+D+P
Sbjct: 201 YQAALQELNQPKSEVDLP 218



 Score = 20.4 bits (41), Expect(2) = 2e-07
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 449 LQVKLTYPRKIALAWL 496
           L V L   +KIALAW+
Sbjct: 222 LSVPLMKHQKIALAWM 237


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