BLASTX nr result

ID: Cephaelis21_contig00024470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024470
         (958 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513427.1| pentatricopeptide repeat-containing protein,...    96   1e-17
ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containi...    92   2e-16
ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|2...    91   3e-16
ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|2...    86   1e-14
gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucu...    85   3e-14

>ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547335|gb|EEF48830.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 567

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 48/78 (61%), Positives = 58/78 (74%)
 Frame = -2

Query: 957 LVLGLCKSRRTDLSLEVLEMMIEKGYMPNETTYNXXXXXXXXXXXXELAGVVLRELHQRQ 778
           L+LG CKS RTDLSLEV EMMIEKGY P+ETTY             ELA  VLRELH RQ
Sbjct: 487 LILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQ 546

Query: 777 VVSRNSVERIVMQYDVQG 724
           V+S+++VER++MQYD++G
Sbjct: 547 VMSQSTVERLIMQYDLEG 564


>ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
           gi|147852271|emb|CAN82234.1| hypothetical protein
           VITISV_038804 [Vitis vinifera]
          Length = 567

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 45/78 (57%), Positives = 57/78 (73%)
 Frame = -2

Query: 957 LVLGLCKSRRTDLSLEVLEMMIEKGYMPNETTYNXXXXXXXXXXXXELAGVVLRELHQRQ 778
           L+LGLCK R+TDLSL V EMM++KGYMPNETTY             ELA  VL+EL+ RQ
Sbjct: 487 LILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKELYLRQ 546

Query: 777 VVSRNSVERIVMQYDVQG 724
            V R+++ER+VMQYD++G
Sbjct: 547 AVGRSTLERLVMQYDLEG 564


>ref|XP_002300545.1| predicted protein [Populus trichocarpa] gi|222847803|gb|EEE85350.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 47/78 (60%), Positives = 56/78 (71%)
 Frame = -2

Query: 957 LVLGLCKSRRTDLSLEVLEMMIEKGYMPNETTYNXXXXXXXXXXXXELAGVVLRELHQRQ 778
           L+LG CKS RTDLSLE+ EMMI KGY PNETTY             ELA  VL+EL+ RQ
Sbjct: 487 LILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQ 546

Query: 777 VVSRNSVERIVMQYDVQG 724
           V+ RN+VER+VMQYD++G
Sbjct: 547 VMRRNTVERLVMQYDLKG 564


>ref|XP_002317023.1| predicted protein [Populus trichocarpa] gi|222860088|gb|EEE97635.1|
           predicted protein [Populus trichocarpa]
          Length = 455

 Score = 86.3 bits (212), Expect = 1e-14
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -2

Query: 957 LVLGLCKSRRTDLSLEVLEMMIEKGYMPNETTYNXXXXXXXXXXXXELAGVVLRELHQRQ 778
           L+LG CKS RTDLSL++LEMM+EKGY PNETTY             ELA  VL+EL  RQ
Sbjct: 375 LILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEEKELAAEVLKELLLRQ 434

Query: 777 VVSRNSVERIVMQYDVQ 727
           V+ RN+ ER+V+QY+++
Sbjct: 435 VMRRNTAERLVLQYNLE 451


>gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 41/76 (53%), Positives = 55/76 (72%)
 Frame = -2

Query: 957 LVLGLCKSRRTDLSLEVLEMMIEKGYMPNETTYNXXXXXXXXXXXXELAGVVLRELHQRQ 778
           L+LG CKSRRTDL+L+V E+M+ KGY+PNETTY             +LA  VLREL  R 
Sbjct: 486 LILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRD 545

Query: 777 VVSRNSVERIVMQYDV 730
           V+S++++ER+VMQYD+
Sbjct: 546 VISQSTLERLVMQYDL 561


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