BLASTX nr result

ID: Cephaelis21_contig00024464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024464
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   256   3e-66
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              256   3e-66
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ...   249   3e-64
ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cu...   247   2e-63
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62

>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  256 bits (655), Expect = 3e-66
 Identities = 120/162 (74%), Positives = 147/162 (90%)
 Frame = -1

Query: 731 HAWTCIASKEEVKERASQWDQPVTEYIDLAERYLGFQQPGSVYGFSDAGNGYKRLSWTFE 552
           HAW C AS++EV+ERA+QWDQPV++YI LAER+LGFQQPGSVYGFSDAG+G++RLSWTFE
Sbjct: 41  HAWLCNASEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFE 100

Query: 551 KEGIKLEWRWKCQPSVNSKKTTADIMDFLMDANIKLSEEVVRKTESFERMRVEAEKCLAQ 372
           KEG KLEWRWKC  S +S+ TTA ++DFLM+ANI+LSEEVV KT+SFER++VEAEKCLAQ
Sbjct: 101 KEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQ 160

Query: 371 SEKLSMEKEEFETEIYAKFVAVLNSKKSKLRELRDRLSKQKT 246
           SEK + EK EFE+ IYAKF+ VLNSKK+KLRELRD++SK++T
Sbjct: 161 SEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQISKEET 202


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  256 bits (655), Expect = 3e-66
 Identities = 120/162 (74%), Positives = 147/162 (90%)
 Frame = -1

Query: 731 HAWTCIASKEEVKERASQWDQPVTEYIDLAERYLGFQQPGSVYGFSDAGNGYKRLSWTFE 552
           HAW C AS++EV+ERA+QWDQPV++YI LAER+LGFQQPGSVYGFSDAG+G++RLSWTFE
Sbjct: 41  HAWLCNASEDEVRERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFE 100

Query: 551 KEGIKLEWRWKCQPSVNSKKTTADIMDFLMDANIKLSEEVVRKTESFERMRVEAEKCLAQ 372
           KEG KLEWRWKC  S +S+ TTA ++DFLM+ANI+LSEEVV KT+SFER++VEAEKCLAQ
Sbjct: 101 KEGTKLEWRWKCGLSPDSRSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQ 160

Query: 371 SEKLSMEKEEFETEIYAKFVAVLNSKKSKLRELRDRLSKQKT 246
           SEK + EK EFE+ IYAKF+ VLNSKK+KLRELRD++SK++T
Sbjct: 161 SEKFNNEKAEFESAIYAKFLGVLNSKKAKLRELRDQISKEET 202


>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
           gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
           putative [Ricinus communis]
          Length = 265

 Score =  249 bits (637), Expect = 3e-64
 Identities = 116/163 (71%), Positives = 144/163 (88%)
 Frame = -1

Query: 731 HAWTCIASKEEVKERASQWDQPVTEYIDLAERYLGFQQPGSVYGFSDAGNGYKRLSWTFE 552
           +AW C A++ +VKERA+QWDQPV+EYI+LAE YLGFQQPGS+Y F+DAG+ +KRLSWTFE
Sbjct: 46  NAWVCNATEGQVKERAAQWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFE 105

Query: 551 KEGIKLEWRWKCQPSVNSKKTTADIMDFLMDANIKLSEEVVRKTESFERMRVEAEKCLAQ 372
           KEG KLEWRWKCQPS ++K TTA I+DFLMDANI+LSEEVV+KT SFER++ EA+KCL Q
Sbjct: 106 KEGTKLEWRWKCQPSPDNKMTTAGILDFLMDANIRLSEEVVKKTHSFERLKEEADKCLTQ 165

Query: 371 SEKLSMEKEEFETEIYAKFVAVLNSKKSKLRELRDRLSKQKTA 243
           SE+ + EK EFE+ IYAKF+AVLNSKK KLR+LRD+LSK++ +
Sbjct: 166 SERFAGEKTEFESSIYAKFLAVLNSKKRKLRQLRDQLSKKEAS 208


>ref|XP_004136882.1| PREDICTED: DNA repair protein XRCC4-like [Cucumis sativus]
           gi|449478860|ref|XP_004155437.1| PREDICTED: DNA repair
           protein XRCC4-like [Cucumis sativus]
          Length = 233

 Score =  247 bits (631), Expect = 2e-63
 Identities = 114/160 (71%), Positives = 142/160 (88%)
 Frame = -1

Query: 731 HAWTCIASKEEVKERASQWDQPVTEYIDLAERYLGFQQPGSVYGFSDAGNGYKRLSWTFE 552
           HAWTC A+++EV+ RA+QWDQ  ++Y+ LAERYLGFQQPGS+Y F+DAGNGYKRLSWTF+
Sbjct: 45  HAWTCHATEDEVRLRAAQWDQEPSDYVALAERYLGFQQPGSIYDFADAGNGYKRLSWTFD 104

Query: 551 KEGIKLEWRWKCQPSVNSKKTTADIMDFLMDANIKLSEEVVRKTESFERMRVEAEKCLAQ 372
           KEG+KLEWRWKCQP+ ++K TTA I++FLMDANI+LSEEVVRK +S ER++ E+EKCLAQ
Sbjct: 105 KEGMKLEWRWKCQPASDNKTTTAGILNFLMDANIRLSEEVVRKNQSVERLKAESEKCLAQ 164

Query: 371 SEKLSMEKEEFETEIYAKFVAVLNSKKSKLRELRDRLSKQ 252
           SEK+  EK EFET IYAKF+ VLN+KK+KLRE RD+LS+Q
Sbjct: 165 SEKICDEKVEFETAIYAKFLNVLNAKKAKLREYRDQLSRQ 204


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  244 bits (622), Expect = 2e-62
 Identities = 115/161 (71%), Positives = 141/161 (87%)
 Frame = -1

Query: 731 HAWTCIASKEEVKERASQWDQPVTEYIDLAERYLGFQQPGSVYGFSDAGNGYKRLSWTFE 552
           ++W C A++EEV++RA+QWDQPV+ YI LAE++LGFQ PGSVY F+DAG G KRLSWTFE
Sbjct: 39  NSWFCNATEEEVRDRAAQWDQPVSTYIQLAEKHLGFQIPGSVYKFTDAGEGNKRLSWTFE 98

Query: 551 KEGIKLEWRWKCQPSVNSKKTTADIMDFLMDANIKLSEEVVRKTESFERMRVEAEKCLAQ 372
           KEG KLEWRWKCQPS ++KKTT  I+DFLMDANI+LSEEVVRKT+SFE+++ EAEKCLAQ
Sbjct: 99  KEGTKLEWRWKCQPSPDTKKTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQ 158

Query: 371 SEKLSMEKEEFETEIYAKFVAVLNSKKSKLRELRDRLSKQK 249
           SEK + +K EFE  +YAKF+ VLNSKK KLRELRD+LSK++
Sbjct: 159 SEKFNSQKMEFEAAVYAKFLGVLNSKKRKLRELRDQLSKKE 199


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