BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024420
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC26674.1| putative non-LTR retroelement reverse transcripta...   200   6e-49
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   197   5e-48
gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]              195   2e-47
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...   195   2e-47
dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like ...   193   9e-47

>gb|AAC26674.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 970

 Score =  200 bits (509), Expect = 6e-49
 Identities = 122/339 (35%), Positives = 166/339 (48%), Gaps = 6/339 (1%)
 Frame = -3

Query: 1157 DNCVWKLSTSGKFSAAKAYEKISMHSWNQP--SKVAERIWKLVCPQRVRAFMWLAMKQKL 984
            D   WK + +G F+   AYE +   +  +P      ++IWKLV P+RVR F+WL     +
Sbjct: 609  DELSWKGTQNGDFTVRSAYELLKPEAEERPLIGSFLKQIWKLVAPERVRVFIWLVSHMVI 668

Query: 983  MTNNNRARRGFTDRTDCDQCGHPLESILHVLRDCPKAREVWDVLGPTGGAQNPNVLQWDE 804
            MTN  R RR  +D   C  C    ESILHVLRDCP    +W  L P    QN    Q+ E
Sbjct: 669  MTNVERVRRHLSDIATCSVCNGADESILHVLRDCPAMTPIWQRLLPQR-RQNEFFSQF-E 726

Query: 803  WFELNISIADTVQNSRVQWNAIFASICWYIWKRRNEAVFNARPISNCDVVTQAWAMARHS 624
            W   N+  A      +  W  +F+   W+ WK R   VF  R +             +  
Sbjct: 727  WLFTNLDPA------KGDWPTLFSMGIWWAWKWRCGDVFGERKLCR-----DRLKFIKDI 775

Query: 623  TEGLRHQDLEEESNRSLRMKESR---WSRPPVDWVKLNSDGAREQSTGWASAGGVIRIHL 453
             E +R   +   +N   R +  R   W  P   WVKL +DGA     G A+A G I    
Sbjct: 776  AEEVRKAHVGTLNNHVKRARVERMIRWKAPSDRWVKLTTDGASRGHQGLAAASGAILNLQ 835

Query: 452  GQWMCGYGRIIGNCSVLQAELWGCFDGLSLAWEKGFRNVEVELDSAEATKMIN-GVDDDG 276
            G+W+ G+   IG+C    AELWG + GL +AW+KGFR VE+ LDS      ++ G+    
Sbjct: 836  GEWLGGFALNIGSCDAPLAELWGAYYGLLIAWDKGFRRVELNLDSELVVGFLSTGISKAH 895

Query: 275  GQCALVRKIRQLFKRDWNCRCRHIFREANKLADSMARYS 159
                LVR  +  F RDW  R  H++REAN+LAD +A Y+
Sbjct: 896  PLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYA 934


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  197 bits (501), Expect = 5e-48
 Identities = 118/339 (34%), Positives = 167/339 (49%), Gaps = 6/339 (1%)
 Frame = -3

Query: 1157 DNCVWKLSTSGKFSAAKAYEKISMHSWNQPSKVA--ERIWKLVCPQRVRAFMWLAMKQKL 984
            D   WK +  G F+   AY  +     ++P+  +   RIWKL+ P+RVR F+WL  +  +
Sbjct: 868  DEISWKGTQDGAFTVRSAYSLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVI 927

Query: 983  MTNNNRARRGFTDRTDCDQCGHPLESILHVLRDCPKAREVWDVLGPTGGAQNPNVLQWDE 804
            MTN  R RR  ++   C  C    E+ILHVLRDCP    +W  L P             E
Sbjct: 928  MTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLE 987

Query: 803  WFELNISIADTVQNSRVQWNAIFASICWYIWKRRNEAVFNARPISNCDVVTQAWAMARHS 624
            W   N+     +      W  +F    W+ WK R   VF  R I             +  
Sbjct: 988  WLFTNMDPVKGI------WPTLFGMGIWWAWKWRCCDVFGERKICR-----DRLKFIKDM 1036

Query: 623  TEGLRHQDLEEESNR--SLRMKES-RWSRPPVDWVKLNSDGAREQSTGWASAGGVIRIHL 453
             E +R   +    NR   +R++   RW  P   WVK+ +DGA   + G A+AGG IR   
Sbjct: 1037 AEEVRRVHVGAVGNRPNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAAAGGAIRNGQ 1096

Query: 452  GQWMCGYGRIIGNCSVLQAELWGCFDGLSLAWEKGFRNVEVELDSAEATKMIN-GVDDDG 276
            G+W+ G+   IG+C+   AELWG + GL +AW+KGFR VE++LD       ++ GV +  
Sbjct: 1097 GEWLGGFALNIGSCAAPLAELWGAYYGLLIAWDKGFRRVELDLDCKLVVGFLSTGVSNAH 1156

Query: 275  GQCALVRKIRQLFKRDWNCRCRHIFREANKLADSMARYS 159
                LVR  +  F RDW  R  H++REAN+LAD +A Y+
Sbjct: 1157 PLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYA 1195


>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score =  195 bits (496), Expect = 2e-47
 Identities = 121/350 (34%), Positives = 169/350 (48%), Gaps = 10/350 (2%)
 Frame = -3

Query: 1157 DNCVWKLSTSGKFSAAKAYEKISMHSWNQPSKVA--ERIWKLVCPQRVRAFMWLAMKQKL 984
            D   WK S  G+FS   AYE +++    +P+  +    +WK+  P+RV+ F+WL   Q +
Sbjct: 362  DRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAV 421

Query: 983  MTNNNRARRGFTDRTDCDQCGHPLESILHVLRDCPKAREVWDVLGPTGGAQNPNVLQWDE 804
            MT   R RR  +    C  C   +ES+LHVLRDCP    +W  + P    Q        E
Sbjct: 422  MTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFE 481

Query: 803  WFELNISIADTVQNSRVQWNAIFASICWYIWKRRNEAVFNARPISNCDV-VTQAWAMARH 627
            W   N+      ++  + W+ IFA I W+ WK R   +F         V   + WA+  +
Sbjct: 482  WLYDNLGDRSGCED--IPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVY 539

Query: 626  STEGLRHQDLEEESNRSLRMKESR------WSRPPVDWVKLNSDGAREQSTGWASAGGVI 465
                          N  + + + R      W  P V WVK+N+DGA   + G ASAGGV+
Sbjct: 540  RAHS---------GNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVL 590

Query: 464  RIHLGQWMCGYGRIIGNCSVLQAELWGCFDGLSLAWEKGFRNVEVELDSAEATKMI-NGV 288
            R   G W  G+   IG CS  QAELWG + GL  AWEK    VE+E+DS      +  G+
Sbjct: 591  RDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGI 650

Query: 287  DDDGGQCALVRKIRQLFKRDWNCRCRHIFREANKLADSMARYSRSQELVF 138
             D      LVR      ++DW  R  H++REAN+LAD +A Y+ S  L F
Sbjct: 651  SDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSLGF 700


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score =  195 bits (496), Expect = 2e-47
 Identities = 121/350 (34%), Positives = 169/350 (48%), Gaps = 10/350 (2%)
 Frame = -3

Query: 1157 DNCVWKLSTSGKFSAAKAYEKISMHSWNQPSKVA--ERIWKLVCPQRVRAFMWLAMKQKL 984
            D   WK S  G+FS   AYE +++    +P+  +    +WK+  P+RV+ F+WL   Q +
Sbjct: 253  DRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAV 312

Query: 983  MTNNNRARRGFTDRTDCDQCGHPLESILHVLRDCPKAREVWDVLGPTGGAQNPNVLQWDE 804
            MT   R RR  +    C  C   +ES+LHVLRDCP    +W  + P    Q        E
Sbjct: 313  MTEEERHRRHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFE 372

Query: 803  WFELNISIADTVQNSRVQWNAIFASICWYIWKRRNEAVFNARPISNCDV-VTQAWAMARH 627
            W   N+      ++  + W+ IFA I W+ WK R   +F         V   + WA+  +
Sbjct: 373  WLYDNLGDRSGCED--IPWSTIFAVIIWWGWKWRCGNIFGENTKCRDRVKFVKEWAVEVY 430

Query: 626  STEGLRHQDLEEESNRSLRMKESR------WSRPPVDWVKLNSDGAREQSTGWASAGGVI 465
                          N  + + + R      W  P V WVK+N+DGA   + G ASAGGV+
Sbjct: 431  RAHS---------GNVLVGITQPRVERMIGWVSPCVGWVKVNTDGASRGNPGLASAGGVL 481

Query: 464  RIHLGQWMCGYGRIIGNCSVLQAELWGCFDGLSLAWEKGFRNVEVELDSAEATKMI-NGV 288
            R   G W  G+   IG CS  QAELWG + GL  AWEK    VE+E+DS      +  G+
Sbjct: 482  RDCTGAWCGGFSLNIGRCSAPQAELWGVYYGLYFAWEKKVPRVELEVDSEVIVGFLKTGI 541

Query: 287  DDDGGQCALVRKIRQLFKRDWNCRCRHIFREANKLADSMARYSRSQELVF 138
             D      LVR      ++DW  R  H++REAN+LAD +A Y+ S  L F
Sbjct: 542  SDSHPLSFLVRLCHGFLQKDWLVRIVHVYREANRLADGLANYAFSLSLGF 591


>dbj|BAB09815.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 676

 Score =  193 bits (490), Expect = 9e-47
 Identities = 115/337 (34%), Positives = 165/337 (48%), Gaps = 3/337 (0%)
 Frame = -3

Query: 1160 EDNCVWKLSTSGKFSAAKAY--EKISMHSWNQPSKVAERIWKLVCPQRVRAFMWLAMKQK 987
            ED   W  + +G+F+ + AY  + +   S    S+  +R+W+++ P+R R F+WL   Q 
Sbjct: 308  EDKMSWVGTENGRFTVSSAYLIQSVDEISKQCMSRFFDRVWRVMVPERARIFLWLVGNQV 367

Query: 986  LMTNNNRARRGFTDRTDCDQCGHPLESILHVLRDCPKAREVWDVLGPTGGAQNPNVLQWD 807
            ++TN  R RR   D   C  C    ES++HVLRDCP    +W  + P    +        
Sbjct: 368  VLTNAERVRRHMADSDVCPLCKGASESLIHVLRDCPAMMGIWMRVVPVMEQRRFFETSLL 427

Query: 806  EWFELNISIADTVQNSRVQWNAIFASICWYIWKRRNEAVFNARPISNCDVVTQAWAMARH 627
            EW   N+   +   + R  W  +FA   W+ WK R   VF         V     A+A  
Sbjct: 428  EWMYGNLK--ERSDSERRSWPTLFALTVWWGWKWRCGYVFGEDSRCRDRVKFLKSAVAEV 485

Query: 626  STEGLRHQDLEEESNRSLRMKESRWSRPPVDWVKLNSDGAREQSTGWASAGGVIRIHLGQ 447
                L       E     RM    W +P   WV +N+DGA   + G A+AGGVIR   G 
Sbjct: 486  EAAHLAANGDAREDVLVERM--IAWRKPAEGWVTMNTDGASHGNPGQATAGGVIRDEHGS 543

Query: 446  WMCGYGRIIGNCSVLQAELWGCFDGLSLAWEKGFRNVEVELDSAEATKMI-NGVDDDGGQ 270
            W+ G+   IG CS   AELWG + GL +AWE+G+R V +E+DSA     + +G+ D    
Sbjct: 544  WLVGFALNIGVCSAPLAELWGVYYGLVVAWERGWRRVRLEVDSALVVGFLQSGIGDSHPL 603

Query: 269  CALVRKIRQLFKRDWNCRCRHIFREANKLADSMARYS 159
              LVR       +DW  R  H++REAN+LAD +A Y+
Sbjct: 604  AFLVRLCHGFISKDWIVRITHVYREANRLADGLANYA 640