BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024392
         (538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    59   3e-16
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    57   8e-15
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    52   2e-14
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta...    52   3e-14
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    53   8e-14

>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 58.9 bits (141), Expect(2) = 3e-16
 Identities = 31/83 (37%), Positives = 43/83 (51%)
 Frame = -2

Query: 522 FKSSRGLRQGDPLLPGLFVIXXXXXXXXXXXXXXNPNFMPYYIRRNCPNITHLSYADDII 343
           F  SRGLRQGDPL P LFV+                 + P  + R  P ++H+ +ADD+I
Sbjct: 82  FIPSRGLRQGDPLSPYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGPLLSHICFADDLI 141

Query: 342 IFTSGFKKSIQEVMKVIRKYCHA 274
           +F       I+ V KV+ K+C A
Sbjct: 142 LFAEASVAQIRVVRKVLEKFCIA 164



 Score = 51.2 bits (121), Expect(2) = 3e-16
 Identities = 31/91 (34%), Positives = 48/91 (52%)
 Frame = -1

Query: 274 SGQLVNIQKSGFIVAPKVNHSRREIIRRVSGFQNRSTLFKYLGCPIFVGRNLKCHFVGLL 95
           SGQ V+++KS    +  V+    + I   SG ++   L KYLG P+   R  K  F  +L
Sbjct: 165 SGQKVSLEKSKIFFSQNVHRDLEKFISDESGIKSTKELGKYLGMPVLQKRINKDTFGEIL 224

Query: 94  DNITTRVAS*SKHFISSGGKITLIKYVFSSI 2
             +++R+A      +S  G++TL K V SSI
Sbjct: 225 LRVSSRLAGWKGRMLSLAGRLTLTKSVLSSI 255


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 56.6 bits (135), Expect(2) = 8e-15
 Identities = 32/91 (35%), Positives = 53/91 (58%)
 Frame = -1

Query: 274 SGQLVNIQKSGFIVAPKVNHSRREIIRRVSGFQNRSTLFKYLGCPIFVGRNLKCHFVGLL 95
           SGQ +N +K+    +  V++  RE I + +GF   ++L KYLG  I  GR  + HF  ++
Sbjct: 140 SGQKINREKTQVYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGRTSRGHFNHII 199

Query: 94  DNITTRVAS*SKHFISSGGKITLIKYVFSSI 2
           + I  +++   +  +S  G+ITL K+V SSI
Sbjct: 200 NKIQNKLSGWKQQCLSLAGRITLSKFVISSI 230



 Score = 48.5 bits (114), Expect(2) = 8e-15
 Identities = 27/83 (32%), Positives = 39/83 (46%)
 Frame = -2

Query: 522 FKSSRGLRQGDPLLPGLFVIXXXXXXXXXXXXXXNPNFMPYYIRRNCPNITHLSYADDII 343
           F  SRG+RQGDPL P LFVI                 + P    R  P I+HL +ADD++
Sbjct: 57  FYPSRGIRQGDPLSPYLFVICMERLSHIIADQVEADYWKPMRAGRYGPPISHLLFADDLL 116

Query: 342 IFTSGFKKSIQEVMKVIRKYCHA 274
           +F     +    V+  +  +C +
Sbjct: 117 LFAEASIEQAHCVLHCLDMFCQS 139


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 52.4 bits (124), Expect(2) = 2e-14
 Identities = 33/91 (36%), Positives = 47/91 (51%)
 Frame = -1

Query: 274 SGQLVNIQKSGFIVAPKVNHSRREIIRRVSGFQNRSTLFKYLGCPIFVGRNLKCHFVGLL 95
           SGQ V+++KS    +  V+    ++I   SG      L KYLG PI   R  K  F  +L
Sbjct: 573 SGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVL 632

Query: 94  DNITTRVAS*SKHFISSGGKITLIKYVFSSI 2
           + ++ R+A      +S  G+ITL K V SSI
Sbjct: 633 ERVSARLAGWKGRSLSLAGRITLTKAVLSSI 663



 Score = 51.2 bits (121), Expect(2) = 2e-14
 Identities = 25/83 (30%), Positives = 41/83 (49%)
 Frame = -2

Query: 522 FKSSRGLRQGDPLLPGLFVIXXXXXXXXXXXXXXNPNFMPYYIRRNCPNITHLSYADDII 343
           F  +RGLRQGDPL P LFV+                 + P  +      ++H+ +ADD+I
Sbjct: 490 FVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLI 549

Query: 342 IFTSGFKKSIQEVMKVIRKYCHA 274
           +F       I+ + +V+ ++C A
Sbjct: 550 LFAEASVAQIRIIRRVLERFCEA 572


>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1044

 Score = 52.0 bits (123), Expect(2) = 3e-14
 Identities = 31/91 (34%), Positives = 47/91 (51%)
 Frame = -1

Query: 274 SGQLVNIQKSGFIVAPKVNHSRREIIRRVSGFQNRSTLFKYLGCPIFVGRNLKCHFVGLL 95
           SGQ++N  KS    + K     +   +++ G Q    L KYLG P   GR  +  F  ++
Sbjct: 536 SGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVGGLGKYLGLPKMFGRKKRDLFNQIV 595

Query: 94  DNITTRVAS*SKHFISSGGKITLIKYVFSSI 2
           D I  R  S S  F+S+ GK T++K V +S+
Sbjct: 596 DRIRQRSLSWSSRFLSTAGKTTMLKSVLASM 626



 Score = 51.2 bits (121), Expect(2) = 3e-14
 Identities = 27/83 (32%), Positives = 40/83 (48%)
 Frame = -2

Query: 531 QGFFKSSRGLRQGDPLLPGLFVIXXXXXXXXXXXXXXNPNFMPYYIRRNCPNITHLSYAD 352
           QG     RGLRQGDPL P LF+I              + + +   + +  P + HL +AD
Sbjct: 450 QGAVTPERGLRQGDPLSPFLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFAD 509

Query: 351 DIIIFTSGFKKSIQEVMKVIRKY 283
           D I F     KS +  + +++KY
Sbjct: 510 DTIFFCRSDLKSCKTFLCILKKY 532


>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 52.8 bits (125), Expect(2) = 8e-14
 Identities = 31/83 (37%), Positives = 37/83 (44%)
 Frame = -2

Query: 522  FKSSRGLRQGDPLLPGLFVIXXXXXXXXXXXXXXNPNFMPYYIRRNCPNITHLSYADDII 343
            F  SRGLRQGDPL P LF+                    P  I R  P I+HL +ADD +
Sbjct: 1330 FAPSRGLRQGDPLSPFLFLFIADGLSLLLEDKVAQGALSPVKICRQAPGISHLLFADDTL 1389

Query: 342  IFTSGFKKSIQEVMKVIRKYCHA 274
            +F        Q V +VI  Y  A
Sbjct: 1390 LFFKADNVQAQAVKEVISDYASA 1412



 Score = 48.9 bits (115), Expect(2) = 8e-14
 Identities = 34/100 (34%), Positives = 46/100 (46%)
 Frame = -1

Query: 301  ESYSEVLSCSGQLVNIQKSGFIVAPKVNHSRREIIRRVSGFQNRSTLFKYLGCPIFVGRN 122
            E  S+  S +GQL+N  K   +         R+ IR      N S   +YLG P   GR 
Sbjct: 1404 EVISDYASATGQLINPAKCSIMFGESSPPQTRDAIRVTLQIANSSFEDRYLGFPTPEGRM 1463

Query: 121  LKCHFVGLLDNITTRVAS*SKHFISSGGKITLIKYVFSSI 2
             K  F  L + I  R+    ++ +SSGGK  LIK V  +I
Sbjct: 1464 CKGKFQSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQAI 1503



 Score = 52.8 bits (125), Expect(2) = 2e-13
 Identities = 31/83 (37%), Positives = 37/83 (44%)
 Frame = -2

Query: 522 FKSSRGLRQGDPLLPGLFVIXXXXXXXXXXXXXXNPNFMPYYIRRNCPNITHLSYADDII 343
           F  SRGLRQGDPL P LF+                    P  I R  P I+HL +ADD +
Sbjct: 632 FAPSRGLRQGDPLSPFLFLFIADGLSLLLEDKVAQGALSPVKICRQAPGISHLLFADDTL 691

Query: 342 IFTSGFKKSIQEVMKVIRKYCHA 274
           +F        Q V +VI  Y  A
Sbjct: 692 LFFKADNVQAQAVKEVISDYASA 714



 Score = 47.4 bits (111), Expect(2) = 2e-13
 Identities = 33/100 (33%), Positives = 45/100 (45%)
 Frame = -1

Query: 301  ESYSEVLSCSGQLVNIQKSGFIVAPKVNHSRREIIRRVSGFQNRSTLFKYLGCPIFVGRN 122
            E  S+  S +GQL+N  K   +         R+ IR      N     +YLG P   GR 
Sbjct: 706  EVISDYASATGQLINPAKCSIMFGESSPPQTRDAIRVTLQIANSGFEDRYLGFPTPEGRM 765

Query: 121  LKCHFVGLLDNITTRVAS*SKHFISSGGKITLIKYVFSSI 2
             K  F  L + I  R+    ++ +SSGGK  LIK V  +I
Sbjct: 766  CKGKFQSLQERIWKRLIIWGENLLSSGGKEVLIKSVIQAI 805