BLASTX nr result

ID: Cephaelis21_contig00024244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024244
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          60   2e-07

>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
 Frame = -3

Query: 417 GLPAIAFSKPHVQRIS--SSFEWVLIGKFAKGYNKQHPQLGRPPVEALKEFFD-SLDFKG 247
           G   I ++K   ++++   + ++ ++ KF+          GRP +  L++     L+ KG
Sbjct: 4   GKTTITWTKKEFEKLTVRQNLQYAVVAKFS---------YGRPDLYELRKAIPIQLEIKG 54

Query: 246 AYQIGLLDNRHLLIQFKQQQDYLHMYSRPVWRIKG----ITMRILKWSTHFHVDKELPVA 79
              IG L+ RH+LI+    +DY  + S+  W ++       +R LKW   F+ ++E  +A
Sbjct: 55  PCNIGFLEERHILIRLSLLEDYATLMSK-AWELRVRNRYFPLRFLKWDPWFNPEEETTIA 113

Query: 78  PVWIGFPRLPI 46
             WI FP LP+
Sbjct: 114 IAWISFPGLPL 124


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