BLASTX nr result

ID: Cephaelis21_contig00024240 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024240
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like...   178   1e-42
ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloro...   176   4e-42
ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|2...   174   3e-41
emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]   160   4e-37
ref|XP_002868977.1| ribosomal protein L12 family protein [Arabid...   149   5e-34

>ref|XP_004141864.1| PREDICTED: 50S ribosomal protein L7/L12-like [Cucumis sativus]
           gi|449499867|ref|XP_004160938.1| PREDICTED: 50S
           ribosomal protein L7/L12-like [Cucumis sativus]
          Length = 168

 Score =  178 bits (452), Expect = 1e-42
 Identities = 98/170 (57%), Positives = 119/170 (70%)
 Frame = +3

Query: 81  MSSITTKIPSKSLLRQLFFLTHRSPLLTRALCTSTEARTQKLERIADELLSLTKLERHDY 260
           M SI +K+P+KSL+R L       PLL R+L T  E RTQKLERIADELL LTK+ERHDY
Sbjct: 1   MPSIASKLPAKSLVRLLTVAPR--PLLVRSLSTVAEERTQKLERIADELLDLTKIERHDY 58

Query: 261 AILLRHKLGLNRYGPAFSGLCDXXXXXXXXXXXXXXXXXXXXEKTTFDVKLETFDPSAKL 440
           AIL R+K+GLN+YGPA SGL                      EKT FD+KLE FD +AK+
Sbjct: 59  AILFRYKMGLNKYGPAVSGLS----APGSAAAGSAAAETKEAEKTVFDIKLEKFDAAAKI 114

Query: 441 KVIKEIRSMTGLGLKEAKDVVEKAPSVVKKGVTKEEADAIIEKLKTVDAT 590
           K+IKE+R+ T LGLKEAKD+VEK P V+KKGVTK++ + IIEKLK + AT
Sbjct: 115 KIIKEVRTFTDLGLKEAKDLVEKVPVVLKKGVTKDQGNPIIEKLKELGAT 164


>ref|XP_002271482.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Vitis
           vinifera]
          Length = 165

 Score =  176 bits (447), Expect = 4e-42
 Identities = 100/171 (58%), Positives = 119/171 (69%)
 Frame = +3

Query: 81  MSSITTKIPSKSLLRQLFFLTHRSPLLTRALCTSTEARTQKLERIADELLSLTKLERHDY 260
           M SITT+IP K+L+R LFF   R+      LC S  A TQKLERIADELL LTKLER+DY
Sbjct: 1   MHSITTRIPYKTLVRPLFFAQSRN------LC-SASATTQKLERIADELLDLTKLERYDY 53

Query: 261 AILLRHKLGLNRYGPAFSGLCDXXXXXXXXXXXXXXXXXXXXEKTTFDVKLETFDPSAKL 440
           +IL R KLGLN+YGPA SGL                      EKT FD+KLE FD +AK+
Sbjct: 54  SILFRLKLGLNKYGPAVSGLASADSASAGSGSAPADAKAA--EKTAFDIKLEKFDAAAKI 111

Query: 441 KVIKEIRSMTGLGLKEAKDVVEKAPSVVKKGVTKEEADAIIEKLKTVDATI 593
           K+IKE+R+ T LGLKEAKD+VEKAP V+KKGVTKEE + I+EKLK + AT+
Sbjct: 112 KIIKEVRTFTDLGLKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLKELGATV 162


>ref|XP_002328780.1| predicted protein [Populus trichocarpa] gi|222839078|gb|EEE77429.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  174 bits (440), Expect = 3e-41
 Identities = 96/171 (56%), Positives = 116/171 (67%)
 Frame = +3

Query: 81  MSSITTKIPSKSLLRQLFFLTHRSPLLTRALCTSTEARTQKLERIADELLSLTKLERHDY 260
           MSSITT + SK+L R+L   T +   +     +S+E +TQKLERIAD LL LTK+ERHDY
Sbjct: 1   MSSITTNLASKTLKRRLLPFTPKPITIISRSSSSSETQTQKLERIADVLLDLTKIERHDY 60

Query: 261 AILLRHKLGLNRYGPAFSGLCDXXXXXXXXXXXXXXXXXXXXEKTTFDVKLETFDPSAKL 440
           AIL RHK+GL RYGPA SG                       EKT FD+KLE FD +AK+
Sbjct: 61  AILFRHKMGLGRYGPAVSGAI-LSGPAAPGSASGDVKTAAAAEKTAFDIKLEKFDAAAKI 119

Query: 441 KVIKEIRSMTGLGLKEAKDVVEKAPSVVKKGVTKEEADAIIEKLKTVDATI 593
           KVIKE+R+ T LGLKEAKD+VEK P V+KKG+TKEEA  IIEKLK + AT+
Sbjct: 120 KVIKEVRTFTDLGLKEAKDLVEKVPVVLKKGLTKEEAGPIIEKLKALGATV 170


>emb|CAN83934.1| hypothetical protein VITISV_035768 [Vitis vinifera]
          Length = 615

 Score =  160 bits (404), Expect = 4e-37
 Identities = 91/158 (57%), Positives = 108/158 (68%)
 Frame = +3

Query: 120 LRQLFFLTHRSPLLTRALCTSTEARTQKLERIADELLSLTKLERHDYAILLRHKLGLNRY 299
           +R LFF   R+      LC S  A TQKLERIADELL LTKLER+DY+IL R KLGLN+Y
Sbjct: 464 VRPLFFAQSRN------LC-SASATTQKLERIADELLDLTKLERYDYSILFRLKLGLNKY 516

Query: 300 GPAFSGLCDXXXXXXXXXXXXXXXXXXXXEKTTFDVKLETFDPSAKLKVIKEIRSMTGLG 479
           GPA SGL                      EKT FD+KLE FD +AK+K+IKE+R+ T LG
Sbjct: 517 GPAVSGLASADSASAGSGSAPADAKAA--EKTAFDIKLEKFDAAAKIKIIKEVRTFTDLG 574

Query: 480 LKEAKDVVEKAPSVVKKGVTKEEADAIIEKLKTVDATI 593
           LKEAKD+VEKAP V+KKGVTKEE + I+EKLK + AT+
Sbjct: 575 LKEAKDLVEKAPVVLKKGVTKEEGNPIVEKLKELGATV 612


>ref|XP_002868977.1| ribosomal protein L12 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297314813|gb|EFH45236.1| ribosomal protein
           L12 family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 167

 Score =  149 bits (377), Expect = 5e-34
 Identities = 87/165 (52%), Positives = 110/165 (66%), Gaps = 4/165 (2%)
 Frame = +3

Query: 117 LLRQLFFLTHRSPLLT--RALCT--STEARTQKLERIADELLSLTKLERHDYAILLRHKL 284
           L R L +L   +PL T  R LC   S EART+KLERIAD+LL+L ++E +DY+IL  HKL
Sbjct: 9   LSRSLGYLHRTTPLTTATRHLCAVASPEARTKKLERIADDLLNLNRIELYDYSILFSHKL 68

Query: 285 GLNRYGPAFSGLCDXXXXXXXXXXXXXXXXXXXXEKTTFDVKLETFDPSAKLKVIKEIRS 464
           GLNRYG A +                        EKT FDVKLE F+ ++K+KVIKEIR+
Sbjct: 69  GLNRYGSAVA-------VAGSDGEASGSTETKTAEKTAFDVKLEKFETASKIKVIKEIRA 121

Query: 465 MTGLGLKEAKDVVEKAPSVVKKGVTKEEADAIIEKLKTVDATIKI 599
            T LGLKEAK++VEKAP +VKKG+TKEEA+ I+EKLK V A + +
Sbjct: 122 FTDLGLKEAKELVEKAPVIVKKGLTKEEAEKIMEKLKAVGAIVAL 166


Top