BLASTX nr result

ID: Cephaelis21_contig00024104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00024104
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   240   4e-61
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   227   3e-57
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   224   3e-56
ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferas...   222   9e-56
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   221   2e-55

>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  240 bits (612), Expect = 4e-61
 Identities = 121/162 (74%), Positives = 138/162 (85%)
 Frame = +3

Query: 3   VGIDIKKVKVPSMHCDARVRTISADVMNLPKDQIRALSPVNKGFSVILSDMCPLVSGITT 182
           VGID+KKVKVPSMHCD+RV+T+ ADVM LPKD+IRA SP  KGFSVILSDMCPLVSGITT
Sbjct: 71  VGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSDMCPLVSGITT 130

Query: 183 RDAALSAELGMRALNLAVGEAALMQSDDNVEEKAQHADGSGSVPENGGILLPGGHLVVKL 362
           +DA LSAELGM+AL+LAV   AL  S D + +K +H D S S P++ GIL PGGHLV+KL
Sbjct: 131 KDAVLSAELGMQALHLAVRGPALAPSGDEI-QKGEHHDDSTSGPDDDGILQPGGHLVIKL 189

Query: 363 LESEDVKEFSQICKPLFKKASWLRPKATRSCSREIYLICQGL 488
           LESED + FS+ICKPLF+KASWLRPKATRS SREIYLICQGL
Sbjct: 190 LESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 231


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  227 bits (579), Expect = 3e-57
 Identities = 116/162 (71%), Positives = 135/162 (83%)
 Frame = +3

Query: 3   VGIDIKKVKVPSMHCDARVRTISADVMNLPKDQIRALSPVNKGFSVILSDMCPLVSGITT 182
           VGID+KKVKVP ++CD+RV+T+ ADVM LPK+Q+RALSP  KGFSV+LSDMCPLVSGITT
Sbjct: 71  VGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSDMCPLVSGITT 130

Query: 183 RDAALSAELGMRALNLAVGEAALMQSDDNVEEKAQHADGSGSVPENGGILLPGGHLVVKL 362
           RDAALSAELGM+AL LAVG AA    D+   ++    + S    ++ GIL PGGHLV+KL
Sbjct: 131 RDAALSAELGMQALGLAVGRAATAHLDEIRTDRL--LNDSVCTADDNGILQPGGHLVIKL 188

Query: 363 LESEDVKEFSQICKPLFKKASWLRPKATRSCSREIYLICQGL 488
           LESED KEFS+ICKPLF+KASWLRPKATRS SREIYLICQGL
Sbjct: 189 LESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score =  224 bits (570), Expect = 3e-56
 Identities = 114/162 (70%), Positives = 133/162 (82%)
 Frame = +3

Query: 3   VGIDIKKVKVPSMHCDARVRTISADVMNLPKDQIRALSPVNKGFSVILSDMCPLVSGITT 182
           +GIDIKKVKVP MHCD+RV+T+SADVMNLPK ++++LSP  KGFSVILSDMCPLVSGITT
Sbjct: 71  LGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSDMCPLVSGITT 130

Query: 183 RDAALSAELGMRALNLAVGEAALMQSDDNVEEKAQHADGSGSVPENGGILLPGGHLVVKL 362
           RDAALS ELGM+A+NLA+GEAAL   D    +     D S S  +  G+L  GGHLV+KL
Sbjct: 131 RDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVLRQGGHLVLKL 190

Query: 363 LESEDVKEFSQICKPLFKKASWLRPKATRSCSREIYLICQGL 488
           LESED +EFS++ KPLF+KASWLRPKATRS SREIYLICQ L
Sbjct: 191 LESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


>ref|XP_003616417.1| Ribosomal RNA large subunit methyltransferase E [Medicago
           truncatula] gi|355517752|gb|AES99375.1| Ribosomal RNA
           large subunit methyltransferase E [Medicago truncatula]
          Length = 238

 Score =  222 bits (566), Expect = 9e-56
 Identities = 116/164 (70%), Positives = 137/164 (83%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   VGIDIKKVKVPSMHCDARVRTISADVMNLPKDQIRALSPVNKGFSVILSDMCPLVSGITT 182
           +GID KKVKVP+ HCD+RV+T++ADVM LPK Q+R LSP  KGFSVILSDMCPLVSGITT
Sbjct: 71  LGIDHKKVKVPTSHCDSRVKTVAADVMTLPKQQLRDLSPKQKGFSVILSDMCPLVSGITT 130

Query: 183 RDAALSAELGMRALNLAVGE-AALMQSD-DNVEEKAQHADGSGSVPENGGILLPGGHLVV 356
           +DAALS ELGMRAL+LAVG+ A++  SD DN++E  +  D SG+  ++GG+L  GGHLVV
Sbjct: 131 KDAALSFELGMRALDLAVGKVASVCNSDGDNLDEVKERCDPSGA--DDGGLLRVGGHLVV 188

Query: 357 KLLESEDVKEFSQICKPLFKKASWLRPKATRSCSREIYLICQGL 488
           KLLESED KE +QICKPLF K+ WLRPKATR  SREIYLICQGL
Sbjct: 189 KLLESEDAKEINQICKPLFTKSVWLRPKATRPSSREIYLICQGL 232


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  221 bits (562), Expect = 2e-55
 Identities = 111/162 (68%), Positives = 133/162 (82%)
 Frame = +3

Query: 3   VGIDIKKVKVPSMHCDARVRTISADVMNLPKDQIRALSPVNKGFSVILSDMCPLVSGITT 182
           VGID+KKVKVP+ +CDARV+T+ ADVMNLP+DQ+RALS   KGFSV+LSDMCP VSGITT
Sbjct: 71  VGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSDMCPPVSGITT 130

Query: 183 RDAALSAELGMRALNLAVGEAALMQSDDNVEEKAQHADGSGSVPENGGILLPGGHLVVKL 362
           +DAALS ELGM+AL++A+G AA    DD  +      D S S   + G+L  GGHLV+KL
Sbjct: 131 KDAALSMELGMQALDIAIGGAASAHPDDENQN-----DDSTSGENDNGVLQAGGHLVIKL 185

Query: 363 LESEDVKEFSQICKPLFKKASWLRPKATRSCSREIYLICQGL 488
           LESED++EF++ICKPLF+KASWLRPKATRS SREIYLICQGL
Sbjct: 186 LESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGL 227


Top