BLASTX nr result

ID: Cephaelis21_contig00023966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023966
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   251   6e-65
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...   242   3e-62
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   239   2e-61
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...   235   2e-60
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   230   1e-58

>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score =  251 bits (640), Expect = 6e-65
 Identities = 119/169 (70%), Positives = 142/169 (84%)
 Frame = +3

Query: 9   DSEQKLFEILLDSLCKEGLVRVASKCFANRRGQDTSWVPSIRIFNILLNGWFRSRNLKRA 188
           DSE  LF+ILLDSLCKEG VRVAS+ F  +RG D SWVPSIR++N+LLNGWFRSR LKRA
Sbjct: 211 DSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFRSRKLKRA 270

Query: 189 EWFWIEMKRENIKPSIVTYGTLIEGYCQMGHVDVAMELIAEMRREGVEPNAIVYNPVMDA 368
           E  W  MKREN+KP++VTYGTL+EGYC+M   + A+EL+ EMR +G+EPN IVYNP++D+
Sbjct: 271 EQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELVGEMRGKGIEPNVIVYNPIIDS 330

Query: 369 LGEAGRFKEAMGLMEQLLLLESGPTISTYNSLVKGFCKAEDLEGASNTL 515
           L EAGRFKEAMG+ME+ L+ E+GPTISTYNSLVKGFCKA DL GAS  L
Sbjct: 331 LAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVL 379


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  242 bits (617), Expect = 3e-62
 Identities = 115/171 (67%), Positives = 140/171 (81%)
 Frame = +3

Query: 3   SSDSEQKLFEILLDSLCKEGLVRVASKCFANRRGQDTSWVPSIRIFNILLNGWFRSRNLK 182
           S    + LFEILLDSLCKEG VRVAS+ F  +R   +S+ PSIR +NIL+NGWFRSR LK
Sbjct: 225 SGTGSEGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLK 284

Query: 183 RAEWFWIEMKRENIKPSIVTYGTLIEGYCQMGHVDVAMELIAEMRREGVEPNAIVYNPVM 362
            A+  W EMK+  I P++VTYGTLIEGYC+M  V++A+EL+ EMRREG+EPNAIVYNP++
Sbjct: 285 HAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIV 344

Query: 363 DALGEAGRFKEAMGLMEQLLLLESGPTISTYNSLVKGFCKAEDLEGASNTL 515
           DALGEAGRFKEA+G+ME+ ++LE GPTISTYNSLVKG+CKA DL GAS  L
Sbjct: 345 DALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKIL 395


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477735|gb|AES58938.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  239 bits (609), Expect = 2e-61
 Identities = 110/170 (64%), Positives = 138/170 (81%)
 Frame = +3

Query: 6   SDSEQKLFEILLDSLCKEGLVRVASKCFANRRGQDTSWVPSIRIFNILLNGWFRSRNLKR 185
           S SE  LFEIL+DSLCKEG  R AS+    R+  D  WVPSIR++NI+LNGWFR+R LK 
Sbjct: 213 SVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWFRARKLKH 272

Query: 186 AEWFWIEMKRENIKPSIVTYGTLIEGYCQMGHVDVAMELIAEMRREGVEPNAIVYNPVMD 365
           AE  W EMK EN++PS+VTYGTL+EGYC+M  V+ A+E++ EM +EG++PNAIVYNP++D
Sbjct: 273 AERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIID 332

Query: 366 ALGEAGRFKEAMGLMEQLLLLESGPTISTYNSLVKGFCKAEDLEGASNTL 515
           AL EAGRFKEA+G+ME+  +L+ GPT+STYNSLVKGFCKA D+EGAS  L
Sbjct: 333 ALAEAGRFKEALGMMERFHVLQIGPTLSTYNSLVKGFCKAGDIEGASKIL 382


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  235 bits (600), Expect = 2e-60
 Identities = 112/171 (65%), Positives = 138/171 (80%)
 Frame = +3

Query: 3   SSDSEQKLFEILLDSLCKEGLVRVASKCFANRRGQDTSWVPSIRIFNILLNGWFRSRNLK 182
           +S++   LFEILLDSLCKEG VRVA+  F  +  +D  WVPS+RI+NILLNGWFRSR LK
Sbjct: 219 NSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLK 278

Query: 183 RAEWFWIEMKRENIKPSIVTYGTLIEGYCQMGHVDVAMELIAEMRREGVEPNAIVYNPVM 362
            AE  W+EMK++N+KPS+VTYGTL+EGY +M  V+ A+EL+ EM+REG++ NAIVYNP++
Sbjct: 279 HAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPII 338

Query: 363 DALGEAGRFKEAMGLMEQLLLLESGPTISTYNSLVKGFCKAEDLEGASNTL 515
           DAL EAGRFKE +G+ME   L E GPTISTYNSLVKG+CKA DL GAS  L
Sbjct: 339 DALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKIL 389


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  230 bits (586), Expect = 1e-58
 Identities = 107/164 (65%), Positives = 132/164 (80%)
 Frame = +3

Query: 24  LFEILLDSLCKEGLVRVASKCFANRRGQDTSWVPSIRIFNILLNGWFRSRNLKRAEWFWI 203
           L EILLDSLCKEG VRVA + F +R+  D+ W+P +RI+NI+LNGWFRSR LK AE  W+
Sbjct: 195 LLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRSRKLKHAERLWL 254

Query: 204 EMKRENIKPSIVTYGTLIEGYCQMGHVDVAMELIAEMRREGVEPNAIVYNPVMDALGEAG 383
           EMK+ N+ PS+VTYGTL+EGYC+M  V+ A+EL+  MR+EG+EPNA+VYNP++DAL E G
Sbjct: 255 EMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELVDVMRKEGIEPNALVYNPIIDALAEEG 314

Query: 384 RFKEAMGLMEQLLLLESGPTISTYNSLVKGFCKAEDLEGASNTL 515
           RFKE  G+ME  L  ESGPTISTYNSLVKG+CKA+D  GAS  L
Sbjct: 315 RFKEVSGMMEYFLQSESGPTISTYNSLVKGYCKAKDPVGASKVL 358


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