BLASTX nr result

ID: Cephaelis21_contig00023957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023957
         (1877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266482.1| PREDICTED: general transcription factor IIH ...   115   4e-23
ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-21
ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group] g...   109   2e-21
gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]              107   1e-20
ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arab...   106   2e-20

>ref|XP_002266482.1| PREDICTED: general transcription factor IIH subunit 5 [Vitis
            vinifera] gi|297742669|emb|CBI34818.3| unnamed protein
            product [Vitis vinifera]
          Length = 70

 Score =  115 bits (288), Expect = 4e-23
 Identities = 56/70 (80%), Positives = 63/70 (90%)
 Frame = +1

Query: 1306 MVNAIKGLLISCDVPMAVFIINMNAALPQSQKFIIHVLDSTHLFVRSDVAGMIKSAIAEF 1485
            MVNA KGL ISCD+PMA FIINMNA++P SQKFIIHVLDSTHLFV+  VA MI+SAI+EF
Sbjct: 1    MVNATKGLFISCDIPMAQFIINMNASMPASQKFIIHVLDSTHLFVQPHVAEMIRSAISEF 60

Query: 1486 REQNTYEKPA 1515
            REQN+YEKPA
Sbjct: 61   REQNSYEKPA 70


>ref|XP_002329886.1| predicted protein [Populus trichocarpa] gi|222871123|gb|EEF08254.1|
            predicted protein [Populus trichocarpa]
          Length = 70

 Score =  110 bits (276), Expect = 1e-21
 Identities = 51/70 (72%), Positives = 63/70 (90%)
 Frame = +1

Query: 1306 MVNAIKGLLISCDVPMAVFIINMNAALPQSQKFIIHVLDSTHLFVRSDVAGMIKSAIAEF 1485
            MVNA KGL ISCD+PMA FIIN+NA+LP SQKFIIH+LDSTH+FV+  V+ MI+SAI++F
Sbjct: 1    MVNATKGLFISCDIPMAQFIINLNASLPASQKFIIHILDSTHMFVQPHVSDMIRSAISDF 60

Query: 1486 REQNTYEKPA 1515
            REQN+YEKP+
Sbjct: 61   REQNSYEKPS 70


>ref|NP_001060068.1| Os07g0573600 [Oryza sativa Japonica Group]
            gi|34393555|dbj|BAC83153.1| unknown protein [Oryza sativa
            Japonica Group] gi|113611604|dbj|BAF21982.1| Os07g0573600
            [Oryza sativa Japonica Group]
            gi|215707252|dbj|BAG93712.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|218199880|gb|EEC82307.1|
            hypothetical protein OsI_26568 [Oryza sativa Indica
            Group] gi|222637319|gb|EEE67451.1| hypothetical protein
            OsJ_24828 [Oryza sativa Japonica Group]
          Length = 131

 Score =  109 bits (273), Expect = 2e-21
 Identities = 50/73 (68%), Positives = 63/73 (86%)
 Frame = +1

Query: 1294 RIDNMVNAIKGLLISCDVPMAVFIINMNAALPQSQKFIIHVLDSTHLFVRSDVAGMIKSA 1473
            R +NMVNAIKGL ISCDVPMA FI+N+NA++P S KFI+H+LD TH+FV+  VA MI+S 
Sbjct: 58   RAENMVNAIKGLFISCDVPMAQFIVNLNASMPASDKFILHMLDPTHMFVQPHVAEMIRSK 117

Query: 1474 IAEFREQNTYEKP 1512
            I+EFR+QN+YEKP
Sbjct: 118  ISEFRDQNSYEKP 130


>gb|AAF79634.1|AC025416_8 F5O11.12 [Arabidopsis thaliana]
          Length = 113

 Score =  107 bits (266), Expect = 1e-20
 Identities = 49/75 (65%), Positives = 64/75 (85%)
 Frame = +1

Query: 1288 VIRIDNMVNAIKGLLISCDVPMAVFIINMNAALPQSQKFIIHVLDSTHLFVRSDVAGMIK 1467
            V+++  MVNAIKG+ +SCD+PM  FI+NMN ++P SQKFIIHVLDSTHLFV+  V  MI+
Sbjct: 37   VLQVLLMVNAIKGVFVSCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIR 96

Query: 1468 SAIAEFREQNTYEKP 1512
            SAI++FR+QN+YEKP
Sbjct: 97   SAISDFRDQNSYEKP 111


>ref|XP_002889933.1| hypothetical protein ARALYDRAFT_471390 [Arabidopsis lyrata subsp.
            lyrata] gi|297335775|gb|EFH66192.1| hypothetical protein
            ARALYDRAFT_471390 [Arabidopsis lyrata subsp. lyrata]
          Length = 71

 Score =  106 bits (264), Expect = 2e-20
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = +1

Query: 1306 MVNAIKGLLISCDVPMAVFIINMNAALPQSQKFIIHVLDSTHLFVRSDVAGMIKSAIAEF 1485
            MVNAIKG+ ISCD+PM  FI+NMN ++P SQKFIIHVLDSTHLFV+  V  MI+SAI++F
Sbjct: 1    MVNAIKGVFISCDIPMTQFIVNMNNSMPPSQKFIIHVLDSTHLFVQPHVEQMIRSAISDF 60

Query: 1486 REQNTYEKP 1512
            R+QN+YEKP
Sbjct: 61   RDQNSYEKP 69


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