BLASTX nr result

ID: Cephaelis21_contig00023951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023951
         (546 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...    88   1e-15
ref|NP_187304.1| agenet domain-containing protein [Arabidopsis t...    69   6e-10
ref|XP_002882477.1| agenet domain-containing protein [Arabidopsi...    69   6e-10
ref|XP_003632414.1| PREDICTED: uncharacterized protein LOC100855...    63   3e-08
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]    63   3e-08

>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
           gi|223541589|gb|EEF43138.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 524

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 63/153 (41%), Positives = 80/153 (52%), Gaps = 3/153 (1%)
 Frame = +1

Query: 94  FQKGDTVEVLRTQNHH---IWFPATVIRSAPAANRAKAQIYVEFETLSAAISDEVLSGDN 264
           F+KGD VEVL+ +N      ++ ATV+RS PA  + K QI ++++TL  A SD       
Sbjct: 9   FKKGDQVEVLKQENGPNTLTYYAATVLRS-PA--KLKTQILIKYQTLMNAESDA------ 59

Query: 265 DEQQTTRLREYVELAHVRPAPPLELHRFFKAGDIVEGFCVQKKGWRKAKVLDILEDSKYA 444
                  + E V+LA VRP PP EL   FK GD V+ FC    GW+K  V DILE+SK+ 
Sbjct: 60  ----RKPITELVDLARVRPMPPRELIECFKNGDSVDVFC--DNGWQKGTVKDILENSKFV 113

Query: 445 VSFSAASNATDDDGXXXXXXXXQWGLRALRDWD 543
           V F         DG        Q  LR  RDWD
Sbjct: 114 VGF---------DGKSEGIVAEQRNLRLHRDWD 137


>ref|NP_187304.1| agenet domain-containing protein [Arabidopsis thaliana]
           gi|12322681|gb|AAG51333.1|AC020580_13 hypothetical
           protein; 66083-64412 [Arabidopsis thaliana]
           gi|332640885|gb|AEE74406.1| agenet domain-containing
           protein [Arabidopsis thaliana]
          Length = 466

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
 Frame = +1

Query: 103 GDTVEVLR-TQNHHIWFPATVIRSAPAANRAKAQIYVEFETLSAAISDEVLSGDNDEQQT 279
           GD VEV R       +FPA+V+ SAP+    K  ++VE E+L+   S  V          
Sbjct: 10  GDRVEVERLVSGATAYFPASVV-SAPSVR--KKLVWVEHESLTVGGSVSV---------- 56

Query: 280 TRLREYVELAHVRPAPPLELHRFFKAGDIVEGFCVQKKGWRKAKVLDILEDSKYAVSFSA 459
            R++EYV    +RP+PP EL+R FKA D V+ F   +  W +  V  +LEDS+Y V F  
Sbjct: 57  -RMKEYVTPTRLRPSPPRELNRRFKADDEVDVFRDSEGCWVRGNVTTVLEDSRYIVEFKG 115

Query: 460 ASNATDDDGXXXXXXXXQWGLRALRDWDD 546
            +    +          Q+ LR  R+W D
Sbjct: 116 ENRPEIE--------VDQFNLRLHREWLD 136


>ref|XP_002882477.1| agenet domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328317|gb|EFH58736.1| agenet domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 459

 Score = 68.6 bits (166), Expect = 6e-10
 Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
 Frame = +1

Query: 103 GDTVEVLR-TQNHHIWFPATVIRSAPAANRAKAQIYVEFETLSAAISDEVLSGDNDEQQT 279
           GD VEV R       +FPATV+ SAP+    K  ++VE E+L+   S  V          
Sbjct: 10  GDRVEVERLVSGATAYFPATVV-SAPSVR--KKLVWVEHESLTVGGSVSV---------- 56

Query: 280 TRLREYVELAHVRPAPPLELHRFFKAGDIVEGFCVQKKGWRKAKVLDILEDSKYAVSFSA 459
            R++EYV    +RP+PP EL+R FKA D V+ F   +  W +  V  + E+S+Y V F  
Sbjct: 57  -RMKEYVIPTRLRPSPPRELNRRFKADDEVDVFRDSEGCWVRGNVTTVFEESRYIVEFKG 115

Query: 460 ASNATDDDGXXXXXXXXQWGLRALRDWDD 546
                   G        Q+ LR  R+W D
Sbjct: 116 --------GNRPEIEVDQFDLRLHREWQD 136


>ref|XP_003632414.1| PREDICTED: uncharacterized protein LOC100855416 [Vitis vinifera]
          Length = 147

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
 Frame = +1

Query: 79  TKMHPFQKGDTVEVLRTQN--HHIWFPATVIRSAPAANRAKAQIYVEFETLSAAISDEVL 252
           T+    +KG+ VEV   +      W+ ATV+R  P   + K +IYVE+ TL +       
Sbjct: 3   TEAEGLKKGEKVEVSSEEEGLRGSWYTATVLR--PVTKKTK-KIYVEYHTLMS------- 52

Query: 253 SGDNDEQQTTRLREYVELAHVRPAPPLELHRFFKAGDIVEGFCVQKKGWRKAKVLDILED 432
               +E  +  LRE V+   VRP PP E+ R FK  + V+ F     GW +  V  +LE+
Sbjct: 53  ----EEDDSKPLRESVDAILVRPYPPREVGRRFKLMEEVDAF--YSDGWWEGVVTQVLEN 106

Query: 433 SKYAVSFSAASNATDDDGXXXXXXXXQWGLRALRDW 540
           S+Y+V F  +    D           Q  LR  R+W
Sbjct: 107 SRYSVFFRTSREQID---------FHQVDLRLHREW 133


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 2/156 (1%)
 Frame = +1

Query: 79   TKMHPFQKGDTVEVLRTQN--HHIWFPATVIRSAPAANRAKAQIYVEFETLSAAISDEVL 252
            T+    +KG+ VEV   +      W+ ATV+R  P   + K +IYVE+ TL +       
Sbjct: 1204 TEAEGLKKGEKVEVSSEEEGLRGSWYTATVLR--PVTKKTK-KIYVEYHTLMS------- 1253

Query: 253  SGDNDEQQTTRLREYVELAHVRPAPPLELHRFFKAGDIVEGFCVQKKGWRKAKVLDILED 432
                +E  +  LRE V+   VRP PP E+ R FK  + V+ F     GW +  V  +LE+
Sbjct: 1254 ----EEDDSKPLRESVDAILVRPYPPREVGRRFKLMEEVDAF--YSDGWWEGVVTQVLEN 1307

Query: 433  SKYAVSFSAASNATDDDGXXXXXXXXQWGLRALRDW 540
            S+Y+V F  +    D           Q  LR  R+W
Sbjct: 1308 SRYSVFFRTSREQID---------FHQVDLRLHREW 1334


Top