BLASTX nr result

ID: Cephaelis21_contig00023791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023791
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containin...   140   1e-31
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           138   5e-31
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   138   5e-31
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ...   136   2e-30
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   136   2e-30

>ref|XP_003544295.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
           [Glycine max]
          Length = 1089

 Score =  140 bits (352), Expect = 1e-31
 Identities = 63/153 (41%), Positives = 98/153 (64%), Gaps = 5/153 (3%)
 Frame = +3

Query: 18  TGIPQGTLPVRYLGVPLAAEGLRVMHYAPLMESIAGQIGIWTSSSLSYAGRLELVRSVLQ 197
           TG  +G LP RYLG+PL +  L       L++ I  ++  W++ +LSY+GR++L+RSV+ 
Sbjct: 39  TGFAKGPLPFRYLGIPLTSRKLNNAQCVGLVDKILDRVNHWSAHTLSYSGRVQLLRSVIF 98

Query: 198 GISCFWLSILPVPAGVIDAVTRLCRTFLWD-----RGKPLVAWRDLTLPKEEGGLGLRDF 362
             + +W+  LP+P GVI  +  +CR+FLW        K  VAW  +  PK +GGL + +F
Sbjct: 99  ATANYWMQCLPLPKGVIRRIEAVCRSFLWTGKSCVTKKSPVAWNKVCAPKNQGGLNVINF 158

Query: 363 RAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLR 461
           ++WN A L K+LW+++ K+DSLW++WVH  Y R
Sbjct: 159 QSWNKACLIKLLWNLYKKEDSLWIQWVHTYYTR 191


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 5/148 (3%)
 Frame = +3

Query: 21   GIPQGTLPVRYLGVPLAAEGLRVMHYAPLMESIAGQIGIWTSSSLSYAGRLELVRSVLQG 200
            G P GT P+RYLG+PL    LR+  Y PL+E ++ ++  W S +LS+AGR +L+ SV+ G
Sbjct: 614  GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFG 673

Query: 201  ISCFWLSILPVPAGVIDAVTRLCRTFLW-----DRGKPLVAWRDLTLPKEEGGLGLRDFR 365
            +  FW+S   +P G I  +  LC  FLW      R    V+W D  LPK EGGLG R F 
Sbjct: 674  LINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFG 733

Query: 366  AWNSALLSKVLWDIHLKKDSLWVRWVHH 449
             WN  LL +++W +  +  SLW +W  H
Sbjct: 734  EWNKTLLLRLIWVLFDRDTSLWAQWQRH 761


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 5/148 (3%)
 Frame = +3

Query: 21   GIPQGTLPVRYLGVPLAAEGLRVMHYAPLMESIAGQIGIWTSSSLSYAGRLELVRSVLQG 200
            G P GT P+RYLG+PL    LR+  Y PL+E ++ ++  W S +LS+AGR +L+ SV+ G
Sbjct: 614  GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEKLSARLRSWVSKALSFAGRTQLISSVIFG 673

Query: 201  ISCFWLSILPVPAGVIDAVTRLCRTFLW-----DRGKPLVAWRDLTLPKEEGGLGLRDFR 365
            +  FW+S   +P G I  +  LC  FLW      R    V+W D  LPK EGGLG R F 
Sbjct: 674  LINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGRKSSKVSWVDCCLPKSEGGLGFRSFG 733

Query: 366  AWNSALLSKVLWDIHLKKDSLWVRWVHH 449
             WN  LL +++W +  +  SLW +W  H
Sbjct: 734  EWNKTLLLRLIWVLFDRDTSLWAQWQRH 761


>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 489

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
 Frame = +3

Query: 6   ILEHTGIPQGTLPVRYLGVPLAAEGLRVMHYAPLMESIAGQIGIWTSSSLSYAGRLELVR 185
           ++ H     GTLPVRYLG+PL  + L    Y PL+E I  +IG W++  LSYAGRL L+ 
Sbjct: 138 VMAHFPFAVGTLPVRYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLIS 197

Query: 186 SVLQGISCFWLSILPVPAGVIDAVTRLCRTFLWDRG-----KPLVAWRDLTLPKEEGGLG 350
           SVL  I  FW+    +P   I  + ++C  +LW  G     K  +AW D+  PK+EGGLG
Sbjct: 198 SVLWSICNFWMGAFRLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLG 257

Query: 351 LRDFRAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLR 461
           LR  +  N     K++W I    DSLWV+W+H T L+
Sbjct: 258 LRSLKEANDVSCLKLIWRIISHADSLWVKWIHATLLK 294


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/153 (40%), Positives = 93/153 (60%), Gaps = 5/153 (3%)
 Frame = +3

Query: 18   TGIPQGTLPVRYLGVPLAAEGLRVMHYAPLMESIAGQIGIWTSSSLSYAGRLELVRSVLQ 197
            T   +G LPVRYLGVPL+ + L +  Y PL++ I  ++  WTS  LSYAGR++LV+S+  
Sbjct: 1069 TDFAEGKLPVRYLGVPLSCKRLTIQQYMPLIDKIVDRVKHWTSKLLSYAGRIQLVKSITS 1128

Query: 198  GISCFWLSILPVPAGVIDAVTRLCRTFLWD-----RGKPLVAWRDLTLPKEEGGLGLRDF 362
             I+ +W+   P+P  V+  +  +CR+F+W        K LVAW  +   K +GG+G+ + 
Sbjct: 1129 AIAMYWMQCFPLPQFVLRKINAICRSFVWTGKQEISKKSLVAWDTMCRNKSQGGVGIINL 1188

Query: 363  RAWNSALLSKVLWDIHLKKDSLWVRWVHHTYLR 461
            + WN   L K LW+I    ++LWV WVH  YL+
Sbjct: 1189 QVWNIVSLMKCLWNICRNSENLWVLWVHTYYLK 1221


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