BLASTX nr result

ID: Cephaelis21_contig00023786 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023786
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284342.1| PREDICTED: transcription initiation factor I...   439   e-153
ref|XP_004150610.1| PREDICTED: transcription initiation factor I...   434   e-153
ref|XP_002269045.1| PREDICTED: transcription initiation factor I...   439   e-152
ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabi...   434   e-151
ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|2...   430   e-151

>ref|XP_002284342.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|297739630|emb|CBI29812.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  439 bits (1130), Expect(2) = e-153
 Identities = 216/243 (88%), Positives = 225/243 (92%)
 Frame = +1

Query: 235 MADAYCPDCKKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 414
           MADA+C DCKK+TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 415 GPANPLLTDGGLSTVISKPNGTTSDFLTSSLGRWQNRGSNPDRSLILAFKTIATMADRLG 594
           GP+NPLLTDGGLSTVI+KPNG + DFL+SSLGRWQNRGSNPDR LILAFKTIATM+DRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 595 LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 774
           LVATIKDRANEIYKKVEDQKS+RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 775 KEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNXXXXXXXXXXXXSEEF 954
           KEIGRAKEYIVKQLE E GQSVEMGTIHAGDFMRRFCSNLGMTN            SEEF
Sbjct: 181 KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 955 DIR 963
           DIR
Sbjct: 241 DIR 243



 Score =  129 bits (324), Expect(2) = e-153
 Identities = 59/70 (84%), Positives = 69/70 (98%)
 Frame = +2

Query: 1034 RRSPISIAAAVIYIVTQLSDDKKPLKDVSVATGVAEGTIRNSYKDLHPHLSKIIPSWYAR 1213
            RRSP+SIAAAVIYI+TQLSD+KK L+D+S+ATGVAEGTIRNSYKDL+PH+SKIIPSWYA+
Sbjct: 243  RRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISKIIPSWYAK 302

Query: 1214 EEDLKNLCSP 1243
            EEDL+NLCSP
Sbjct: 303  EEDLRNLCSP 312


>ref|XP_004150610.1| PREDICTED: transcription initiation factor IIB-2-like [Cucumis
           sativus] gi|449529834|ref|XP_004171903.1| PREDICTED:
           transcription initiation factor IIB-2-like [Cucumis
           sativus]
          Length = 312

 Score =  434 bits (1115), Expect(2) = e-153
 Identities = 213/243 (87%), Positives = 222/243 (91%)
 Frame = +1

Query: 235 MADAYCPDCKKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 414
           M+DA+C DCK+ TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 415 GPANPLLTDGGLSTVISKPNGTTSDFLTSSLGRWQNRGSNPDRSLILAFKTIATMADRLG 594
           GP NPLL DGGLSTVI+KPNGTT +FL+SSLGRWQNRGSNPDR LILAFKTIATM+DRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 595 LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 774
           LVATIKDRANEIYK+VEDQKSSRGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 775 KEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNXXXXXXXXXXXXSEEF 954
           KEIGRAKEYIVKQL LE GQSVEMGTIHAGDFMRRFCSNLGM N            SEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 955 DIR 963
           DIR
Sbjct: 241 DIR 243



 Score =  135 bits (339), Expect(2) = e-153
 Identities = 63/70 (90%), Positives = 69/70 (98%)
 Frame = +2

Query: 1034 RRSPISIAAAVIYIVTQLSDDKKPLKDVSVATGVAEGTIRNSYKDLHPHLSKIIPSWYAR 1213
            RRSPISIAAAVIYI+TQLSDDKKPLKD+SVATGVAEGTIRNSYKDL+PH+SKI+P WYA+
Sbjct: 243  RRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWYAK 302

Query: 1214 EEDLKNLCSP 1243
            EEDLKNLCSP
Sbjct: 303  EEDLKNLCSP 312


>ref|XP_002269045.1| PREDICTED: transcription initiation factor IIB-2 [Vitis vinifera]
           gi|296088031|emb|CBI35314.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  439 bits (1130), Expect(2) = e-152
 Identities = 216/243 (88%), Positives = 225/243 (92%)
 Frame = +1

Query: 235 MADAYCPDCKKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 414
           MADA+C DCKK+TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MADAFCTDCKKNTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 415 GPANPLLTDGGLSTVISKPNGTTSDFLTSSLGRWQNRGSNPDRSLILAFKTIATMADRLG 594
           GP+NPLLTDGGLSTVI+KPNG + DFL+SSLGRWQNRGSNPDR LILAFKTIATM+DRLG
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGVSGDFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 595 LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 774
           LVATIKDRANEIYKKVEDQKS+RGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSTRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 775 KEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNXXXXXXXXXXXXSEEF 954
           KEIGRAKEYIVKQLE E GQSVEMGTIHAGDFMRRFCSNLGMTN            SEEF
Sbjct: 181 KEIGRAKEYIVKQLEAEKGQSVEMGTIHAGDFMRRFCSNLGMTNQVVKAAQEAVQKSEEF 240

Query: 955 DIR 963
           DIR
Sbjct: 241 DIR 243



 Score =  128 bits (321), Expect(2) = e-152
 Identities = 58/70 (82%), Positives = 69/70 (98%)
 Frame = +2

Query: 1034 RRSPISIAAAVIYIVTQLSDDKKPLKDVSVATGVAEGTIRNSYKDLHPHLSKIIPSWYAR 1213
            RRSP+SIAAAVIYI+TQLSD+KK L+D+S+ATGVAEGTIRNSYKDL+PH+S+IIPSWYA+
Sbjct: 243  RRSPVSIAAAVIYIITQLSDEKKLLRDISIATGVAEGTIRNSYKDLYPHISRIIPSWYAK 302

Query: 1214 EEDLKNLCSP 1243
            EEDL+NLCSP
Sbjct: 303  EEDLRNLCSP 312


>ref|XP_002882661.1| transcription initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata] gi|297328501|gb|EFH58920.1| transcription
           initiation factor IIB-2 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 312

 Score =  434 bits (1115), Expect(2) = e-151
 Identities = 213/243 (87%), Positives = 223/243 (91%)
 Frame = +1

Query: 235 MADAYCPDCKKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 414
           M+DA+C DCK+ TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 415 GPANPLLTDGGLSTVISKPNGTTSDFLTSSLGRWQNRGSNPDRSLILAFKTIATMADRLG 594
           GP NPLL DGGL+TVISKPNG++ DFL+SSLGRWQNRGSNPDR LI+AFKTIATMADRLG
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 595 LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 774
           LVATIKDRANEIYK+VEDQKSSRGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 775 KEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNXXXXXXXXXXXXSEEF 954
           KEIGRAKEYIVKQL LE GQSVEMGTIHAGDFMRRFCSNLGMTN            SEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 955 DIR 963
           DIR
Sbjct: 241 DIR 243



 Score =  130 bits (326), Expect(2) = e-151
 Identities = 62/70 (88%), Positives = 69/70 (98%)
 Frame = +2

Query: 1034 RRSPISIAAAVIYIVTQLSDDKKPLKDVSVATGVAEGTIRNSYKDLHPHLSKIIPSWYAR 1213
            RRSPISIAAAVIYI+TQLSD+KKPL+D+SVATGVAEGTIRNSYKDL+PHLSKIIP+WYA+
Sbjct: 243  RRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWYAK 302

Query: 1214 EEDLKNLCSP 1243
            EEDLKNL SP
Sbjct: 303  EEDLKNLQSP 312


>ref|XP_002322722.1| predicted protein [Populus trichocarpa] gi|222867352|gb|EEF04483.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  430 bits (1105), Expect(2) = e-151
 Identities = 211/243 (86%), Positives = 221/243 (90%)
 Frame = +1

Query: 235 MADAYCPDCKKSTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 414
           M DA+C DCK+ TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MGDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 415 GPANPLLTDGGLSTVISKPNGTTSDFLTSSLGRWQNRGSNPDRSLILAFKTIATMADRLG 594
           GP NPLLTDGGLSTVI+KPNG + +FL+SSLGRWQNRGSNPDR LI AFKTIATM+DRLG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLITAFKTIATMSDRLG 120

Query: 595 LVATIKDRANEIYKKVEDQKSSRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK 774
           LVATIKDRANEIYKKVEDQKSSRGRNQDA+LAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 775 KEIGRAKEYIVKQLELEMGQSVEMGTIHAGDFMRRFCSNLGMTNXXXXXXXXXXXXSEEF 954
           KEIGRAKEYIVKQL LE GQSVEMGTIHAGDFMRRFCSNLGM+N            SE+F
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMSNHTVKAATEAVKTSEQF 240

Query: 955 DIR 963
           DIR
Sbjct: 241 DIR 243



 Score =  134 bits (336), Expect(2) = e-151
 Identities = 63/70 (90%), Positives = 69/70 (98%)
 Frame = +2

Query: 1034 RRSPISIAAAVIYIVTQLSDDKKPLKDVSVATGVAEGTIRNSYKDLHPHLSKIIPSWYAR 1213
            RRSPISIAAAVIYI+TQLSDDKKPL+D+S+ATGVAEGTIRNSYKDL+PH+SKIIPSWYA 
Sbjct: 243  RRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHVSKIIPSWYAS 302

Query: 1214 EEDLKNLCSP 1243
            EEDLKNLCSP
Sbjct: 303  EEDLKNLCSP 312


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