BLASTX nr result
ID: Cephaelis21_contig00023774
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cephaelis21_contig00023774
(597 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI37746.3| unnamed protein product [Vitis vinifera] 87 4e-47
ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vi... 87 4e-47
ref|XP_002312804.1| cholesterol transport protein [Populus trich... 85 4e-47
ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi... 84 5e-47
ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana... 92 6e-47
>emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 86.7 bits (213), Expect(3) = 4e-47
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -3
Query: 355 ISHAFMVSEGDREQRARQALQTMGASVFSGITLTKLVGVVVLCFARSEIFVV 200
ISHAF VS+GDR QRA+ AL TMGASVFSGITLTKLVGV+VLCF++SEIFVV
Sbjct: 1988 ISHAFSVSQGDRNQRAKLALGTMGASVFSGITLTKLVGVIVLCFSKSEIFVV 2039
Score = 74.3 bits (181), Expect(3) = 4e-47
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -1
Query: 135 RSEIFVVYYFQMYLALVIIGFLHGLVLLPVVLSMFGPASRFIP 7
+SEIFVVYYFQMYLALV+IGFLHGLV LPV+LSM GP S +P
Sbjct: 2033 KSEIFVVYYFQMYLALVLIGFLHGLVFLPVILSMIGPPSMHVP 2075
Score = 73.9 bits (180), Expect(3) = 4e-47
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -2
Query: 596 SLWXXXXXXXXXXXXXLDLMGVMAVLNIQLNAVSVLNIIMSIGIAVEFCVHISHAFMV 423
S+W +DLMGVMA L+IQLNAVSV+N+IMSIGIAVEFCVHISHAF V
Sbjct: 1937 SVWSSAIILLVLAMIIVDLMGVMACLDIQLNAVSVVNLIMSIGIAVEFCVHISHAFSV 1994
>ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vinifera]
Length = 1234
Score = 86.7 bits (213), Expect(3) = 4e-47
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = -3
Query: 355 ISHAFMVSEGDREQRARQALQTMGASVFSGITLTKLVGVVVLCFARSEIFVV 200
ISHAF VS+GDR QRA+ AL TMGASVFSGITLTKLVGV+VLCF++SEIFVV
Sbjct: 1132 ISHAFSVSQGDRNQRAKLALGTMGASVFSGITLTKLVGVIVLCFSKSEIFVV 1183
Score = 74.3 bits (181), Expect(3) = 4e-47
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -1
Query: 135 RSEIFVVYYFQMYLALVIIGFLHGLVLLPVVLSMFGPASRFIP 7
+SEIFVVYYFQMYLALV+IGFLHGLV LPV+LSM GP S +P
Sbjct: 1177 KSEIFVVYYFQMYLALVLIGFLHGLVFLPVILSMIGPPSMHVP 1219
Score = 73.9 bits (180), Expect(3) = 4e-47
Identities = 38/58 (65%), Positives = 43/58 (74%)
Frame = -2
Query: 596 SLWXXXXXXXXXXXXXLDLMGVMAVLNIQLNAVSVLNIIMSIGIAVEFCVHISHAFMV 423
S+W +DLMGVMA L+IQLNAVSV+N+IMSIGIAVEFCVHISHAF V
Sbjct: 1081 SVWSSAIILLVLAMIIVDLMGVMACLDIQLNAVSVVNLIMSIGIAVEFCVHISHAFSV 1138
>ref|XP_002312804.1| cholesterol transport protein [Populus trichocarpa]
gi|222849212|gb|EEE86759.1| cholesterol transport protein
[Populus trichocarpa]
Length = 1223
Score = 85.1 bits (209), Expect(3) = 4e-47
Identities = 42/52 (80%), Positives = 48/52 (92%)
Frame = -3
Query: 355 ISHAFMVSEGDREQRARQALQTMGASVFSGITLTKLVGVVVLCFARSEIFVV 200
I+HAF+VS GDR QRA++AL TMGASVFSGITLTKLVGV+VL FARSE+FVV
Sbjct: 1132 IAHAFLVSHGDRGQRAKEALSTMGASVFSGITLTKLVGVIVLFFARSEVFVV 1183
Score = 75.1 bits (183), Expect(3) = 4e-47
Identities = 37/58 (63%), Positives = 44/58 (75%)
Frame = -2
Query: 596 SLWXXXXXXXXXXXXXLDLMGVMAVLNIQLNAVSVLNIIMSIGIAVEFCVHISHAFMV 423
S W +DLMGVMA+L+IQLNAVSV+N+IMSIGIAVEFCVHI+HAF+V
Sbjct: 1081 SFWCSAIILLVLVMIVVDLMGVMAILDIQLNAVSVVNLIMSIGIAVEFCVHIAHAFLV 1138
Score = 74.7 bits (182), Expect(3) = 4e-47
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -1
Query: 135 RSEIFVVYYFQMYLALVIIGFLHGLVLLPVVLSMFGPASRFI 10
RSE+FVVYYFQMYLALVIIGFLHGLV LPVVLS+FGP R +
Sbjct: 1177 RSEVFVVYYFQMYLALVIIGFLHGLVFLPVVLSVFGPPPRHV 1218
>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
[Ricinus communis]
Length = 1235
Score = 84.3 bits (207), Expect(3) = 5e-47
Identities = 40/52 (76%), Positives = 48/52 (92%)
Frame = -3
Query: 355 ISHAFMVSEGDREQRARQALQTMGASVFSGITLTKLVGVVVLCFARSEIFVV 200
I+HAF VS GDR+QR ++AL TMGASVFSGITLTKLVGV+VLCF+R+E+FVV
Sbjct: 1134 ITHAFSVSSGDRDQRVKEALGTMGASVFSGITLTKLVGVLVLCFSRTEVFVV 1185
Score = 75.5 bits (184), Expect(3) = 5e-47
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = -2
Query: 596 SLWXXXXXXXXXXXXXLDLMGVMAVLNIQLNAVSVLNIIMSIGIAVEFCVHISHAFMV 423
SLW +DLMGVMA+LNIQLNAVSV+N++M++GIAVEFCVHI+HAF V
Sbjct: 1083 SLWSSAIILLVLAMIVIDLMGVMAILNIQLNAVSVVNLVMAVGIAVEFCVHITHAFSV 1140
Score = 74.7 bits (182), Expect(3) = 5e-47
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = -1
Query: 135 RSEIFVVYYFQMYLALVIIGFLHGLVLLPVVLSMFGPASR 16
R+E+FVVYYFQMYLALV++GFLHGLV LPVVLSMFGP SR
Sbjct: 1179 RTEVFVVYYFQMYLALVLLGFLHGLVFLPVVLSMFGPPSR 1218
>ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana]
gi|332661517|gb|AEE86917.1| Patched family protein
[Arabidopsis thaliana]
Length = 1297
Score = 92.4 bits (228), Expect(3) = 6e-47
Identities = 45/52 (86%), Positives = 50/52 (96%)
Frame = -3
Query: 355 ISHAFMVSEGDREQRARQALQTMGASVFSGITLTKLVGVVVLCFARSEIFVV 200
ISHAF++S GDRE RAR+AL+TMGASVFSGITLTKLVGV+VLCFARSEIFVV
Sbjct: 1195 ISHAFLMSSGDREHRAREALETMGASVFSGITLTKLVGVIVLCFARSEIFVV 1246
Score = 71.6 bits (174), Expect(3) = 6e-47
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = -2
Query: 545 DLMGVMAVLNIQLNAVSVLNIIMSIGIAVEFCVHISHAFMV 423
DLMG+M +L IQLNAVSV+N+IMSIGIAVEFCVHISHAF++
Sbjct: 1161 DLMGMMVILGIQLNAVSVVNLIMSIGIAVEFCVHISHAFLM 1201
Score = 70.1 bits (170), Expect(3) = 6e-47
Identities = 33/37 (89%), Positives = 35/37 (94%)
Frame = -1
Query: 135 RSEIFVVYYFQMYLALVIIGFLHGLVLLPVVLSMFGP 25
RSEIFVVYYFQMYLALVIIGFLHGLV LPV+LS+ GP
Sbjct: 1240 RSEIFVVYYFQMYLALVIIGFLHGLVFLPVILSLAGP 1276