BLASTX nr result

ID: Cephaelis21_contig00023760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00023760
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|2...   570   e-160
ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   566   e-159
ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arab...   562   e-157
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   561   e-157
ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis...   561   e-157

>ref|XP_002320427.1| predicted protein [Populus trichocarpa] gi|222861200|gb|EEE98742.1|
            predicted protein [Populus trichocarpa]
          Length = 817

 Score =  570 bits (1468), Expect = e-160
 Identities = 285/378 (75%), Positives = 324/378 (85%)
 Frame = -2

Query: 1136 DRDSISLLNERVLREHSKRDSRSSPLMDPQEANKYLELVKEQQERXXXXXXXXXXXXGRA 957
            ++D IS+LNER+ R+H  +   S P+MD +EA++Y+++VKEQQ+R               
Sbjct: 66   EQDPISILNERIRRQHHGKREGSRPIMDSEEADQYIQMVKEQQQRGLQKLKGDRVAK--- 122

Query: 956  DPPLFGYKVDPYTLRPGDYVVHKKVGIGRFVAIKFDIPKDSAISTHRTHIEYVFIEYADG 777
            +  +F YKVDPYTLR GDYVVHKKVGIGRF  IKFD+PK S+ +     IEYVFIEYADG
Sbjct: 123  EGDVFSYKVDPYTLRSGDYVVHKKVGIGRFFGIKFDVPKGSSEA-----IEYVFIEYADG 177

Query: 776  MAKLPVKQASRMLYRYNLPNETKRPRTLSKLSDPSAWERKRVKGKVAVQKMVVDLMELYI 597
            MAKLPV QASRMLYRYNLPNETKRPRTLSKLSD  AWER++ KGKVA+QKMVVDLMELY+
Sbjct: 178  MAKLPVMQASRMLYRYNLPNETKRPRTLSKLSDTGAWERRKTKGKVAIQKMVVDLMELYL 237

Query: 596  HRLKQRRPPYPKTPALAEFVAQFPYKPTPDQQQAIMDVEKDLTERDNPMDRLICGDVGFG 417
            HRLKQRRPPYPKTP +AEF AQFPY+PTPDQ+ A +DVE+DL +R+ PMDRLICGDVGFG
Sbjct: 238  HRLKQRRPPYPKTPFMAEFAAQFPYEPTPDQKLAFIDVERDLNQRETPMDRLICGDVGFG 297

Query: 416  KTEVALRAIFCVVSAGKQAMVLAPTTILAKQHYEVISERFSRYSDIKVGLLSRFQSKSEK 237
            KTEVALRAIFC+VSAGKQAMVLAPT +LAKQH++VISERFS+YS IKV LLSRFQSK+EK
Sbjct: 298  KTEVALRAIFCIVSAGKQAMVLAPTIVLAKQHFDVISERFSKYSHIKVALLSRFQSKAEK 357

Query: 236  EEYLHKIKHGHLDITVGTHSLLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 57
            E YL+ I+HGHLDI VGTHSLLG+RVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL
Sbjct: 358  EMYLNMIEHGHLDIIVGTHSLLGNRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 417

Query: 56   TLSATPIPRTLYLALAGF 3
            TLSATPIPRTLYLAL GF
Sbjct: 418  TLSATPIPRTLYLALTGF 435


>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis vinifera]
          Length = 823

 Score =  566 bits (1459), Expect = e-159
 Identities = 284/378 (75%), Positives = 324/378 (85%)
 Frame = -2

Query: 1136 DRDSISLLNERVLREHSKRDSRSSPLMDPQEANKYLELVKEQQERXXXXXXXXXXXXGRA 957
            + D I++LNER+ RE SKRD   +P++D +EA+KY++LVKEQQ R               
Sbjct: 72   ESDDITILNERIRREQSKRDVSRAPVVDSEEADKYIQLVKEQQRRGLQKLKGERVGKENG 131

Query: 956  DPPLFGYKVDPYTLRPGDYVVHKKVGIGRFVAIKFDIPKDSAISTHRTHIEYVFIEYADG 777
                F YKVDPYTLR GDYVVHKKVGIGRFV IK D+PKDS+       IEYVFIEYADG
Sbjct: 132  Q---FSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKDSS-----NPIEYVFIEYADG 183

Query: 776  MAKLPVKQASRMLYRYNLPNETKRPRTLSKLSDPSAWERKRVKGKVAVQKMVVDLMELYI 597
            MAKLPVKQASRMLYRYNLP+E+KRPRTLSKLSD S WER+R+KG+VA+QKMVVDLMELY+
Sbjct: 184  MAKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVAIQKMVVDLMELYL 243

Query: 596  HRLKQRRPPYPKTPALAEFVAQFPYKPTPDQQQAIMDVEKDLTERDNPMDRLICGDVGFG 417
            HRLKQ+RPPYPK+P +AEF AQF Y+PTPDQ+QA +DVE+DLTER+ PMDRLICGDVGFG
Sbjct: 244  HRLKQKRPPYPKSPGMAEFEAQFSYEPTPDQKQAFIDVEEDLTERETPMDRLICGDVGFG 303

Query: 416  KTEVALRAIFCVVSAGKQAMVLAPTTILAKQHYEVISERFSRYSDIKVGLLSRFQSKSEK 237
            KTEVALRAIFCVVSAGKQAMVLAPT +LAKQH++VI+ERFS+Y +IKVGLLSRFQ+ +EK
Sbjct: 304  KTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHFDVITERFSKYPNIKVGLLSRFQTTAEK 363

Query: 236  EEYLHKIKHGHLDITVGTHSLLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 57
            E++L  IKHG LDI VGTHSLLG+RVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVL
Sbjct: 364  EKHLRMIKHGDLDIIVGTHSLLGNRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 423

Query: 56   TLSATPIPRTLYLALAGF 3
            TLSATPIPRTLYLAL GF
Sbjct: 424  TLSATPIPRTLYLALTGF 441


>ref|XP_002884246.1| hypothetical protein ARALYDRAFT_477305 [Arabidopsis lyrata subsp.
            lyrata] gi|297330086|gb|EFH60505.1| hypothetical protein
            ARALYDRAFT_477305 [Arabidopsis lyrata subsp. lyrata]
          Length = 823

 Score =  562 bits (1448), Expect = e-157
 Identities = 285/378 (75%), Positives = 319/378 (84%)
 Frame = -2

Query: 1136 DRDSISLLNERVLREHSKRDSRSSPLMDPQEANKYLELVKEQQERXXXXXXXXXXXXGRA 957
            + DSISLLNER+ R+  KR++ + P MD +E  KY+++VKEQQER              A
Sbjct: 70   ESDSISLLNERIRRDIGKRET-ARPAMDSEETEKYIQMVKEQQERGLQKLKGIRQGTEAA 128

Query: 956  DPPLFGYKVDPYTLRPGDYVVHKKVGIGRFVAIKFDIPKDSAISTHRTHIEYVFIEYADG 777
                F YKVDPY+L  GDYVVHKKVGIGRFV IKFD+PKDS+       +EYVFIEYADG
Sbjct: 129  GTGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSS-----EPLEYVFIEYADG 183

Query: 776  MAKLPVKQASRMLYRYNLPNETKRPRTLSKLSDPSAWERKRVKGKVAVQKMVVDLMELYI 597
            MAKLP+KQASR+LYRYNLPNETKRPRTLS+LSD S WER++ KGKVA+QKMVVDLMELY+
Sbjct: 184  MAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYL 243

Query: 596  HRLKQRRPPYPKTPALAEFVAQFPYKPTPDQQQAIMDVEKDLTERDNPMDRLICGDVGFG 417
            HRL+Q+R PYPK P +A+F AQFPY  TPDQ+QA +DVEKDLTER+ PMDRLICGDVGFG
Sbjct: 244  HRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDVGFG 303

Query: 416  KTEVALRAIFCVVSAGKQAMVLAPTTILAKQHYEVISERFSRYSDIKVGLLSRFQSKSEK 237
            KTEVALRAIFCVVSAGKQAMVLAPT +LAKQHY+VISERFS Y  IKVGLLSRFQ+K+EK
Sbjct: 304  KTEVALRAIFCVVSAGKQAMVLAPTIVLAKQHYDVISERFSLYPQIKVGLLSRFQTKAEK 363

Query: 236  EEYLHKIKHGHLDITVGTHSLLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 57
            EEYL  IK GHL+I VGTHSLLGSRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVL
Sbjct: 364  EEYLEMIKDGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 423

Query: 56   TLSATPIPRTLYLALAGF 3
            TLSATPIPRTLYLAL GF
Sbjct: 424  TLSATPIPRTLYLALTGF 441


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
            gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
            helicase [Arabidopsis thaliana]
          Length = 823

 Score =  561 bits (1447), Expect = e-157
 Identities = 285/378 (75%), Positives = 318/378 (84%)
 Frame = -2

Query: 1136 DRDSISLLNERVLREHSKRDSRSSPLMDPQEANKYLELVKEQQERXXXXXXXXXXXXGRA 957
            + DSISLLNER+ R+  KR++ + P MD +EA KY+ +VKEQQER              A
Sbjct: 70   ESDSISLLNERIRRDLGKRET-ARPAMDSEEAEKYIHMVKEQQERGLQKLKGIRQGTKAA 128

Query: 956  DPPLFGYKVDPYTLRPGDYVVHKKVGIGRFVAIKFDIPKDSAISTHRTHIEYVFIEYADG 777
                F YKVDPY+L  GDYVVHKKVGIGRFV IKFD+PKDS+       +EYVFIEYADG
Sbjct: 129  GDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSS-----EPLEYVFIEYADG 183

Query: 776  MAKLPVKQASRMLYRYNLPNETKRPRTLSKLSDPSAWERKRVKGKVAVQKMVVDLMELYI 597
            MAKLP+KQASR+LYRYNLPNETKRPRTLS+LSD S WER++ KGKVA+QKMVVDLMELY+
Sbjct: 184  MAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYL 243

Query: 596  HRLKQRRPPYPKTPALAEFVAQFPYKPTPDQQQAIMDVEKDLTERDNPMDRLICGDVGFG 417
            HRL+Q+R PYPK P +A+F AQFPY  TPDQ+QA +DVEKDLTER+ PMDRLICGDVGFG
Sbjct: 244  HRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDVGFG 303

Query: 416  KTEVALRAIFCVVSAGKQAMVLAPTTILAKQHYEVISERFSRYSDIKVGLLSRFQSKSEK 237
            KTEVALRAIFCVVS GKQAMVLAPT +LAKQHY+VISERFS Y  IKVGLLSRFQ+K+EK
Sbjct: 304  KTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDVISERFSLYPHIKVGLLSRFQTKAEK 363

Query: 236  EEYLHKIKHGHLDITVGTHSLLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 57
            EEYL  IK GHL+I VGTHSLLGSRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVL
Sbjct: 364  EEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 423

Query: 56   TLSATPIPRTLYLALAGF 3
            TLSATPIPRTLYLAL GF
Sbjct: 424  TLSATPIPRTLYLALTGF 441


>ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
            gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase
            [Arabidopsis thaliana] gi|332640234|gb|AEE73755.1|
            putative DEAD/DEAH box helicase [Arabidopsis thaliana]
          Length = 822

 Score =  561 bits (1447), Expect = e-157
 Identities = 285/378 (75%), Positives = 318/378 (84%)
 Frame = -2

Query: 1136 DRDSISLLNERVLREHSKRDSRSSPLMDPQEANKYLELVKEQQERXXXXXXXXXXXXGRA 957
            + DSISLLNER+ R+  KR++ + P MD +EA KY+ +VKEQQER              A
Sbjct: 69   ESDSISLLNERIRRDLGKRET-ARPAMDSEEAEKYIHMVKEQQERGLQKLKGIRQGTKAA 127

Query: 956  DPPLFGYKVDPYTLRPGDYVVHKKVGIGRFVAIKFDIPKDSAISTHRTHIEYVFIEYADG 777
                F YKVDPY+L  GDYVVHKKVGIGRFV IKFD+PKDS+       +EYVFIEYADG
Sbjct: 128  GDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSS-----EPLEYVFIEYADG 182

Query: 776  MAKLPVKQASRMLYRYNLPNETKRPRTLSKLSDPSAWERKRVKGKVAVQKMVVDLMELYI 597
            MAKLP+KQASR+LYRYNLPNETKRPRTLS+LSD S WER++ KGKVA+QKMVVDLMELY+
Sbjct: 183  MAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMVVDLMELYL 242

Query: 596  HRLKQRRPPYPKTPALAEFVAQFPYKPTPDQQQAIMDVEKDLTERDNPMDRLICGDVGFG 417
            HRL+Q+R PYPK P +A+F AQFPY  TPDQ+QA +DVEKDLTER+ PMDRLICGDVGFG
Sbjct: 243  HRLRQKRYPYPKNPIMADFAAQFPYNATPDQKQAFLDVEKDLTERETPMDRLICGDVGFG 302

Query: 416  KTEVALRAIFCVVSAGKQAMVLAPTTILAKQHYEVISERFSRYSDIKVGLLSRFQSKSEK 237
            KTEVALRAIFCVVS GKQAMVLAPT +LAKQHY+VISERFS Y  IKVGLLSRFQ+K+EK
Sbjct: 303  KTEVALRAIFCVVSTGKQAMVLAPTIVLAKQHYDVISERFSLYPHIKVGLLSRFQTKAEK 362

Query: 236  EEYLHKIKHGHLDITVGTHSLLGSRVVYNNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 57
            EEYL  IK GHL+I VGTHSLLGSRVVY+NLGLLVVDEEQRFGVKQKEKIASFKTSVDVL
Sbjct: 363  EEYLEMIKTGHLNIIVGTHSLLGSRVVYSNLGLLVVDEEQRFGVKQKEKIASFKTSVDVL 422

Query: 56   TLSATPIPRTLYLALAGF 3
            TLSATPIPRTLYLAL GF
Sbjct: 423  TLSATPIPRTLYLALTGF 440